; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024082 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024082
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold13:9630744..9632170
RNA-Seq ExpressionSpg024082
SyntenySpg024082
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]5.1e-4327.65Show/hide
Query:  APLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIPISAS
        A + SN S  WR  +W   +++ G+R RIG+G     +KD WIP+  TF P+    +    E  V+D I     W + +L     ++D   I  I + + 
Subjt:  APLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIPISAS

Query:  HDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLC
         +ED  +WH+   G+YSV+SGY+LA+N +   E  SS++    WK+ W L++  KVK+F+ RA    LPT   LWKR     P+C  CK Q ET+ H L 
Subjt:  HDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLC

Query:  GCTRAKRICD--------------TLFPRVDEVIQVRNNFADR--------IIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGI--------
         C  A++I D                F  + E+   R++ A+         +IW ARN    E +K+   F       ++      S  G +        
Subjt:  GCTRAKRICD--------------TLFPRVDEVIQVRNNFADR--------IIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGI--------

Query:  -------------------AIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTD
                           A+   +   G GA++ D  GK+        +       AE   I  G+++   +  S+  V SD    V+++       T+
Subjt:  -------------------AIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTD

Query:  VHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP
        +H  +  ++     F+++ F+ IPR  N  A  LAK AL  S + +W+  FP
Subjt:  VHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.0e-5931.97Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        SLLQA   S  S FW+ F+W R LL  G+R R+GNG +   F DPW+P+  TF PL         +  V+ FIT    W++  +      +D ++I ++P
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        IS+ + +D+W+WHY   G YSVRSGYKL M+L     SAS++     W  +W L + +K+K+FI R+ HE +PT   L  RG+   P C IC  + E+I 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIW--LARNLTNSEFEKAAL-----------LFGPYGMTGIVFII----------------------
        H    C RA++I  TLFP +   +   +N +   +W  L   L   +   AA+           L     ++ + F                        
Subjt:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIW--LARNLTNSEFEKAAL-----------LFGPYGMTGIVFII----------------------

Query:  ------IVKSWIGGIAIG-KSNIGA-------GYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQ
              +V+ W    ++  K N  A        +G +I D +  +  A       P SPL AEI  I+ G++       ++  V SDSL+A+++IR E+ 
Subjt:  ------IVKSWIGGIAIG-KSNIGA-------GYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQ

Query:  VTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDAL-NRSQSILWLDNFPLWLISM
           D  +WV+ IQ +   F  +SF+H  R+ NR A  LAK  + + S +  WL NFP WL+ +
Subjt:  VTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDAL-NRSQSILWLDNFPLWLISM

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.7e-4429.58Show/hide
Query:  LQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIPIS
        + A L S  S  WR  VW R +L  G R RIGNG +   + + WIP+  TF P+ A  +    +  V++ I     W    +      +D   I  IP+ 
Subjt:  LQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIPIS

Query:  ASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHT
            ED  IWHY   G YSV+SGY++AM +   ++ + S++ +  W+ +W L I  KVK+F+ RA H+ LPT   LWK+ +   PMC  C    ET+ H 
Subjt:  ASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHT

Query:  LCGCTRAKRI---------------CDTL-----FPRVDEVIQVRNNFADR-IIWLARNLTNSEFEKAALLFGPYGMTGIV--FIII-------------
        L  C RA++I               CD +     +PR    ++     A    IW ARN    E +K   L        IV  F  I             
Subjt:  LCGCTRAKRI---------------CDTL-----FPRVDEVIQVRNNFADR-IIWLARNLTNSEFEKAALLFGPYGMTGIV--FIII-------------

Query:  --VKSWIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTT
           K W              A+   N  AG G ++ D +G    A     R P S   AE   +  G+++ +   I+     SDSL  + +I  +    T
Subjt:  --VKSWIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTT

Query:  DVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP
        ++   +  IQ    +FQ     H PR+ N  A  LAK AL + ++++WLD  P
Subjt:  DVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]5.6e-5029.45Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        S L A   +N S  WR  +W R +++ GMR RIGNG   + F D W+P+  TF P+  + + P + V V+D I     W+  KLR    + DT  I  IP
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        + A   ED  +WHY   G YSV+SGY+LA+       ++ ++    +W  LW L +  K+K+F+ RA +  LP+   LWKR +   P C  CK   ETI 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRI-------CDTLFPRVDEVIQVRNNFADRI--------------IWLARN------------LTNSEFEKAALLFGPYGMTGIVFIII-
        H L  C  A++I          L     ++     N A  +               W ARN            ++ ++ E     F          I I 
Subjt:  HTLCGCTRAKRI-------CDTLFPRVDEVIQVRNNFADRI--------------IWLARN------------LTNSEFEKAALLFGPYGMTGIVFIII-

Query:  ----VKSWIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQV
             + W+             A    N+ AG GA+I D NGK+  A         S   AE   ++ G++L ++ ++S+  + SD L  V+++      
Subjt:  ----VKSWIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQV

Query:  TTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP
         +++   ++ IQN    FQ++   HIPR  N  A +LAK AL +    +WL N P
Subjt:  TTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]6.0e-4427.8Show/hide
Query:  QESLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIAT
        Q   + A +    S+ W+  VW R LL  G+  +IG+G   +   D WIP    F PL   G   N    V+D+IT +  W+L  L    S  D + I T
Subjt:  QESLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIAT

Query:  IPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEET
        IP+S +   D W WHY S+G Y+V+SGY LA +L N   S+SS +   WW++ W LN+ SKV++F  R  +  LP    L+ R +  S  C++C    E+
Subjt:  IPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEET

Query:  IDHTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK-----------------AALLFGPYGMTG-----IVFIIIVKS-------
        I H L  C  AK +      ++D          D +++L+  LT SE EK                    L  P  ++      +     VKS       
Subjt:  IDHTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK-----------------AALLFGPYGMTG-----IVFIIIVKS-------

Query:  ----------WIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGE
                  W+             A+  S    G G +I D  G+V  AM             E   +  G++  + +++    V +D L+ V  ++G+
Subjt:  ----------WIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGE

Query:  LQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFPLWLISM
            +  H  V  I     SF     +H+ R+AN+ A  LAK AL      +W++  P  + S+
Subjt:  LQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFPLWLISM

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.4e-5931.97Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        SLLQA   S  S FW+ F+W R LL  G+R R+GNG +   F DPW+P+  TF PL         +  V+ FIT    W++  +      +D ++I ++P
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        IS+ + +D+W+WHY   G YSVRSGYKL M+L     SAS++     W  +W L + +K+K+FI R+ HE +PT   L  RG+   P C IC  + E+I 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIW--LARNLTNSEFEKAAL-----------LFGPYGMTGIVFII----------------------
        H    C RA++I  TLFP +   +   +N +   +W  L   L   +   AA+           L     ++ + F                        
Subjt:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIW--LARNLTNSEFEKAAL-----------LFGPYGMTGIVFII----------------------

Query:  ------IVKSWIGGIAIG-KSNIGA-------GYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQ
              +V+ W    ++  K N  A        +G +I D +  +  A       P SPL AEI  I+ G++       ++  V SDSL+A+++IR E+ 
Subjt:  ------IVKSWIGGIAIG-KSNIGA-------GYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQ

Query:  VTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDAL-NRSQSILWLDNFPLWLISM
           D  +WV+ IQ +   F  +SF+H  R+ NR A  LAK  + + S +  WL NFP WL+ +
Subjt:  VTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDAL-NRSQSILWLDNFPLWLISM

A0A803PAK3 Uncharacterized protein1.5e-4529.58Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        S L A L S+ S+ WR  VW + LL  G+R ++GNG        PW+P   +F PL   G   NA ++VSD I     WN   L T+    D  +I +IP
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        ++     D  IWH+ S G YSV+SGY LA  L   Q  +S +  + WWK  W L + SK+++F+ RA H+CLP    L  R +  S  C +C    ETI 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRICDT--LFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGIAIGKSNIGAGYGALILDLNGKVCG
        H L  C R K+  D     P         +N A               + +  L  P G   +             AI      +G+GA++ D +G++  
Subjt:  HTLCGCTRAKRICDT--LFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGIAIGKSNIGAGYGALILDLNGKVCG

Query:  AMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQ
        AM        +P   E   ++H ++ ++ +++    + ++SL  VK +    ++ +D H  + +I  +  +F     TH+ R AN  A  LA+ AL+   
Subjt:  AMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQ

Query:  SILWLDNFP
        +  W+   P
Subjt:  SILWLDNFP

A0A803PC16 Uncharacterized protein1.5e-4529.24Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        S L A L S  S+ WR  VW + LL  G+R ++GNG        PW+P   +F PL   G   NA ++VSD I     WN   L T+    D  +I +IP
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        ++     D  IWH+ S G YSV+SGY LA  L   Q  +S +  + WWK  W L + SK+++F+ RA H+CLP    L  R +  S  C +C    ETI 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGIAIGKSNIGAGYGALILDLNGKVCGAM
        H L  C R K+                      ++ L+     +  + +  L  P G   +             AI      +G+GA++ D +G++  AM
Subjt:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGIAIGKSNIGAGYGALILDLNGKVCGAM

Query:  EYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSI
                +P   E   ++H ++ ++ +++    + +DSL  VK +    ++ +D H  + +I  +  +F     TH+ R AN  A  LA+ AL+   + 
Subjt:  EYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSI

Query:  LWLDNFP
         W++  P
Subjt:  LWLDNFP

A0A803PIB6 Uncharacterized protein2.9e-4427.8Show/hide
Query:  QESLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIAT
        Q   + A +    S+ W+  VW R LL  G+  +IG+G   +   D WIP    F PL   G   N    V+D+IT +  W+L  L    S  D + I T
Subjt:  QESLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIAT

Query:  IPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEET
        IP+S +   D W WHY S+G Y+V+SGY LA +L N   S+SS +   WW++ W LN+ SKV++F  R  +  LP    L+ R +  S  C++C    E+
Subjt:  IPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEET

Query:  IDHTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK-----------------AALLFGPYGMTG-----IVFIIIVKS-------
        I H L  C  AK +      ++D          D +++L+  LT SE EK                    L  P  ++      +     VKS       
Subjt:  IDHTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK-----------------AALLFGPYGMTG-----IVFIIIVKS-------

Query:  ----------WIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGE
                  W+             A+  S    G G +I D  G+V  AM             E   +  G++  + +++    V +D L+ V  ++G+
Subjt:  ----------WIG----------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMIRGE

Query:  LQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFPLWLISM
            +  H  V  I     SF     +H+ R+AN+ A  LAK AL      +W++  P  + S+
Subjt:  LQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFPLWLISM

A0A803QJ22 Uncharacterized protein2.0e-4526.46Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP
        S L A L S  S+ WR  VW + LL  G+R ++GNG        PW+P   +F PL   G   NA ++VSD I     WN + L T+    D  +I +IP
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIP

Query:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID
        ++     D  IWH+ S G YSV+SGY LA  L   Q  +S +  + WWK  W L + SK+++F+ RA H+CLP    L  R +  S  C +C    ETI 
Subjt:  ISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETID

Query:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLF------------GPYGMTGIVFIIIVKSWIG----------------
        H L  C R K++       +  ++    N  +  + ++   ++   E+ A +             G       V +    S+I                 
Subjt:  HTLCGCTRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLF------------GPYGMTGIVFIIIVKSWIG----------------

Query:  --------------------------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMI
                                    AI      +G+GA++ D +G++  AM        +P   E   ++H ++ ++ +++    + +DSL  VK +
Subjt:  --------------------------GIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQHMEISNATVYSDSLVAVKMI

Query:  RGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP
            ++ +D H  + +I  +  +F     TH+ R AN  A  LA+ AL+   +  W +  P
Subjt:  RGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.1e-0625.93Show/hide
Query:  VRSGYKLAMNLSNGQESA-----SSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLCGCTRAKRICDTL
        +RSGY +A +    +E A      S  ++   + +W L++  K+K F+ R     L TN  L  R +D  P+C  C  +EETI H +  C   + +  + 
Subjt:  VRSGYKLAMNLSNGQESA-----SSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLCGCTRAKRICDTL

Query:  FPRVDEVIQVRNNFAD---RIIWLARNLTNSEFEK
           +       ++F D   R+I L++  T +  ++
Subjt:  FPRVDEVIQVRNNFAD---RIIWLARNLTNSEFEK

AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)1.4e-0631.25Show/hide
Query:  TSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLG-WNLAKLRTMVSEDDTNIIATIPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLS
        T  +KDPWIP  +   P  +I    ++ + V+D I  +   W L +L+ ++   D  +I  I  S ++  D + W +  +G Y+V+SGY +A +LS
Subjt:  TSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLG-WNLAKLRTMVSEDDTNIIATIPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLS

AT3G09510.1 Ribonuclease H-like superfamily protein1.6e-1827.31Show/hide
Query:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLG----WNLAKLRTMVSEDDTNII
        S+L A ++   S  W   +    LL+ G R  IG+G +     D  +       P   +  E   +    + +    G    W+ +K+   V + D   I
Subjt:  SLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLG----WNLAKLRTMVSEDDTNII

Query:  ATIPISASHDEDAWIWHYCSNGQYSVRSGYKL-----AMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNI
          I ++ S   D  IW+Y + G+Y+VRSGY L     + N+        S +L+     +WNL I  K+K F+ RA  + L T   L  RGM + P C  
Subjt:  ATIPISASHDEDAWIWHYCSNGQYSVRSGYKL-----AMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNI

Query:  CKTQEETIDHTLCGC---TRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK
        C  + E+I+H L  C   T A R+ D+   R   +          I+   ++ T S+F K
Subjt:  CKTQEETIDHTLCGC---TRAKRICDTLFPRVDEVIQVRNNFADRIIWLARNLTNSEFEK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0536.92Show/hide
Query:  WWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLCGCTRAKR
        W   +W+L I  K+KL I +A +  LP    L  R + + P C  C+   ETI H L  C  A+R
Subjt:  WWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLCGCTRAKR

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-1625.23Show/hide
Query:  LQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEP------NAEVRVSDFITPS-LGWNLAKLRTMVSEDDTNI
        L APL S  S  W+    ++ +L+ G R  +GNG     ++  W+  +     L    V P      ++ ++VSD I  S   W    +  +  E +  +
Subjt:  LQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEP------NAEVRVSDFITPS-LGWNLAKLRTMVSEDDTNI

Query:  IATIPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQES---ASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNIC
        I  +        D++ W Y S+G Y+V+SGY +   + N + S    S  +L   ++ +W      K++ F+ +     LP    L  R +     C  C
Subjt:  IATIPISASHDEDAWIWHYCSNGQYSVRSGYKLAMNLSNGQES---ASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNIC

Query:  KTQEETIDHTLCGCTRAK
         + +ET++H L  CT A+
Subjt:  KTQEETIDHTLCGCTRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAATCTCTTCTGCAAGCTCCACTCAAATCAAACTGTTCTGTATTTTGGAGAAGGTTTGTTTGGGCCAGGGGTCTATTGCAAAGTGGTATGCGCAAGAGGATTGG
TAATGGATTATCTACATCTTTTTTCAAGGACCCGTGGATTCCAAAGGAGGTCACATTTATGCCTCTTATGGCCATTGGAGTGGAGCCAAACGCTGAGGTACGGGTGTCTG
ACTTTATCACACCATCTCTAGGATGGAATCTGGCTAAATTGCGTACAATGGTGAGCGAGGACGATACCAACATTATTGCTACCATTCCAATTAGTGCAAGCCATGACGAG
GATGCTTGGATCTGGCATTACTGTTCTAATGGACAATACTCAGTGCGAAGTGGCTACAAATTAGCTATGAATCTATCAAATGGGCAGGAATCAGCTAGTAGTGACAACTT
GAGATGTTGGTGGAAAATGCTGTGGAATTTGAACATTCAATCAAAAGTGAAATTGTTCATCCGGCGAGCTTTCCATGAATGTTTACCCACAAATTATTGCCTATGGAAGA
GAGGTATGGATTTGTCGCCTATGTGTAATATATGTAAAACACAAGAGGAGACTATTGACCATACTTTATGTGGTTGTACGCGTGCCAAACGAATATGTGATACGCTATTC
CCTCGCGTGGATGAGGTCATCCAAGTAAGAAATAATTTTGCAGATCGGATCATATGGCTTGCTAGAAACCTCACAAATAGTGAATTTGAGAAAGCAGCATTACTTTTTGG
GCCATATGGAATGACAGGAATAGTTTTCATCATCATTGTCAAGTCATGGATTGGAGGGATCGCAATTGGAAAAAGTAATATAGGTGCTGGATATGGGGCTCTTATTCTTG
ATTTGAATGGCAAAGTTTGTGGTGCAATGGAATATATGGAGCGCACACCTCATTCTCCATTGGCGGCAGAGATAAACACCATTATTCATGGAATAAGATTGTTGCAGCAT
ATGGAAATATCCAACGCTACTGTTTATTCAGATTCGCTAGTAGCTGTTAAGATGATTCGGGGTGAACTGCAAGTAACAACAGATGTCCATCATTGGGTGGTTCATATTCA
GAACATGCAGTTGTCATTCCAGGAGTTGTCATTCACCCATATACCTCGGGAGGCAAATAGGGGAGCTGATTTTCTTGCTAAGGATGCGTTAAATAGATCGCAATCTATTC
TTTGGTTAGACAATTTCCCACTTTGGTTGATTTCTATGGGTAGCATTACTCATTGCAATTGTATCCAACATTGCGTTTGCTCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAATCTCTTCTGCAAGCTCCACTCAAATCAAACTGTTCTGTATTTTGGAGAAGGTTTGTTTGGGCCAGGGGTCTATTGCAAAGTGGTATGCGCAAGAGGATTGG
TAATGGATTATCTACATCTTTTTTCAAGGACCCGTGGATTCCAAAGGAGGTCACATTTATGCCTCTTATGGCCATTGGAGTGGAGCCAAACGCTGAGGTACGGGTGTCTG
ACTTTATCACACCATCTCTAGGATGGAATCTGGCTAAATTGCGTACAATGGTGAGCGAGGACGATACCAACATTATTGCTACCATTCCAATTAGTGCAAGCCATGACGAG
GATGCTTGGATCTGGCATTACTGTTCTAATGGACAATACTCAGTGCGAAGTGGCTACAAATTAGCTATGAATCTATCAAATGGGCAGGAATCAGCTAGTAGTGACAACTT
GAGATGTTGGTGGAAAATGCTGTGGAATTTGAACATTCAATCAAAAGTGAAATTGTTCATCCGGCGAGCTTTCCATGAATGTTTACCCACAAATTATTGCCTATGGAAGA
GAGGTATGGATTTGTCGCCTATGTGTAATATATGTAAAACACAAGAGGAGACTATTGACCATACTTTATGTGGTTGTACGCGTGCCAAACGAATATGTGATACGCTATTC
CCTCGCGTGGATGAGGTCATCCAAGTAAGAAATAATTTTGCAGATCGGATCATATGGCTTGCTAGAAACCTCACAAATAGTGAATTTGAGAAAGCAGCATTACTTTTTGG
GCCATATGGAATGACAGGAATAGTTTTCATCATCATTGTCAAGTCATGGATTGGAGGGATCGCAATTGGAAAAAGTAATATAGGTGCTGGATATGGGGCTCTTATTCTTG
ATTTGAATGGCAAAGTTTGTGGTGCAATGGAATATATGGAGCGCACACCTCATTCTCCATTGGCGGCAGAGATAAACACCATTATTCATGGAATAAGATTGTTGCAGCAT
ATGGAAATATCCAACGCTACTGTTTATTCAGATTCGCTAGTAGCTGTTAAGATGATTCGGGGTGAACTGCAAGTAACAACAGATGTCCATCATTGGGTGGTTCATATTCA
GAACATGCAGTTGTCATTCCAGGAGTTGTCATTCACCCATATACCTCGGGAGGCAAATAGGGGAGCTGATTTTCTTGCTAAGGATGCGTTAAATAGATCGCAATCTATTC
TTTGGTTAGACAATTTCCCACTTTGGTTGATTTCTATGGGTAGCATTACTCATTGCAATTGTATCCAACATTGCGTTTGCTCAATTTAA
Protein sequenceShow/hide protein sequence
MQESLLQAPLKSNCSVFWRRFVWARGLLQSGMRKRIGNGLSTSFFKDPWIPKEVTFMPLMAIGVEPNAEVRVSDFITPSLGWNLAKLRTMVSEDDTNIIATIPISASHDE
DAWIWHYCSNGQYSVRSGYKLAMNLSNGQESASSDNLRCWWKMLWNLNIQSKVKLFIRRAFHECLPTNYCLWKRGMDLSPMCNICKTQEETIDHTLCGCTRAKRICDTLF
PRVDEVIQVRNNFADRIIWLARNLTNSEFEKAALLFGPYGMTGIVFIIIVKSWIGGIAIGKSNIGAGYGALILDLNGKVCGAMEYMERTPHSPLAAEINTIIHGIRLLQH
MEISNATVYSDSLVAVKMIRGELQVTTDVHHWVVHIQNMQLSFQELSFTHIPREANRGADFLAKDALNRSQSILWLDNFPLWLISMGSITHCNCIQHCVCSI