; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024098 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024098
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:2829743..2837773
RNA-Seq ExpressionSpg024098
SyntenySpg024098
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC83100.1 hypothetical protein OsI_28249 [Oryza sativa Indica Group]5.7e-2228.47Show/hide
Query:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASS--------------SIDFGQKER
        +KW  V  L+D NG+ + H I+  F+P DV++IL+I     +  D V W  +  G FSV+SAYHLA  L +   +SS              S    QK R
Subjt:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASS--------------SIDFGQKER

Query:  L--------------------------------KRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN
        +                                + E   H L RC   + +W          V + R    A  + D IS  +S EE     +++W IW 
Subjt:  L--------------------------------KRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN

Query:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR---DTNLLE-------AIAESQANHN-------AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL
         RN+I+ G      +   R I   +   L+IR   D NL +       A A +Q NH         W  P   ++K+NVD S++     GG+G + R+S 
Subjt:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR---DTNLLE-------AIAESQANHN-------AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL

Query:  GSPVVAGCAKLQRNWPIKSLEA--LAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHS
        G  + A C  + R  P+ +LEA  +A +EG+   L+    FL  IIVE+D LE+VK +  + +  S+  FL+ +I  L          K  R+ +   H 
Subjt:  GSPVVAGCAKLQRNWPIKSLEA--LAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHS

Query:  LARVAAGSSSV
        LA      S +
Subjt:  LARVAAGSSSV

PNT77801.1 hypothetical protein BRADI_1g69052v3, partial [Brachypodium distachyon]1.3e-2327.13Show/hide
Query:  RVEALID--NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEA---------------SSSIDFGQKERLK
        +V  LID  +GD ++ L+  +F P D   IL+IP      +D V W L    +FSV+SAYH  +     + +                   DF    ++K
Subjt:  RVEALID--NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEA---------------SSSIDFGQKERLK

Query:  -------------------RESPVHLLWRCKFIREVWGR--YFPNIKEAVFSCREEEEAV--LVCDRIS-RGMSSEEIEKAAIIIWAIWNYRNKISMGTD
                           R   + L++ C   +EVW +     +I EAV   R     +  L+C  ++ +G     +E   I+ W +W  R +     D
Subjt:  -------------------RESPVHLLWRCKFIREVWGR--YFPNIKEAVFSCREEEEAV--LVCDRIS-RGMSSEEIEKAAIIIWAIWNYRNKISMGTD

Query:  QPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIRE
        +P   TLS  I   +     +     + ++  +      W  PP +FVKINVDAS++     G +G + RD+ G  +VA   KL     + S E  A++ 
Subjt:  QPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIRE

Query:  GLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA
        GL   ++       +II+  D+LEVV+ALN      S +  +  +   L    G +  + C R +NS+AH LAR A
Subjt:  GLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA

XP_023915006.1 uncharacterized protein LOC112026546 [Quercus suber]9.6e-2227.92Show/hide
Query:  VEALIDNGD--LNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERL-KR--------------
        V +LID+      V ++R+ F+P + D IL IP+     +D +VW    KG F+VKSAY++A  +  + E   S    +   L KR              
Subjt:  VEALIDNGD--LNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERL-KR--------------

Query:  --------------------------------ESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRN
                                        E+  H L  C   +  W  +      AV S   +E   +  D I +  SS  +E    + W+IW  RN
Subjt:  --------------------------------ESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRN

Query:  K-ISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKS
        + +  G+  P  Q     I+   E       +NL   +  S  N   W PPP  F KINVD + ++       G I RDS GS + A C  L   +P   
Subjt:  K-ISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKS

Query:  LEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA--AGSSSVFR
         EALA+++G+   L      L ++I ESD+L +++A+N E     E   ++ +I  LA+      F    R  N  AH LAR A   G S V++
Subjt:  LEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA--AGSSSVFR

XP_024042628.1 uncharacterized protein LOC112099434 [Citrus clementina]1.7e-2626.9Show/hide
Query:  LIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRCKFIREVW--GRYFPNIKEAV
        L+ + F+  D D I+ IP+   + +D+V+W  + KG +SVKS Y +A ++      SSS++   +     E+  H L  CK  R+ W   ++  + K+ V
Subjt:  LIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRCKFIREVW--GRYFPNIKEAV

Query:  FSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVD
               + + V   + + MS  + E  A+  W IW  RNK+     +P +Q      +  +E + +++ + L+    + +    AW PPP ++ K+NVD
Subjt:  FSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVD

Query:  ASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLL
        A+  +  N  G+G + RD+ G+ + A     + +  +   EA A+R GL   + +    L  +I+E+DS  V   +N+    ++E  +LL
Subjt:  ASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLL

XP_024046732.1 uncharacterized protein LOC112101057 [Citrus clementina]8.4e-2626.39Show/hide
Query:  PEILKWGRVEALI-DNGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKR--------
        P +L   +V  LI  +   N  LI  +F     + I +IP+    + DE VW  + KG ++VKS Y +A +L + +  +SS +   + ++ +        
Subjt:  PEILKWGRVEALI-DNGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKR--------

Query:  ---ESPVHLLWRCKFIREVWGRYF--PNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLK
           E   H    CK  R+VW   +    ++E V      E  + V   + + MS  E+E  A++ W IW+ RNK+     + N  +L  + +  +E + +
Subjt:  ---ESPVHLLWRCKFIREVWGRYF--PNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLK

Query:  IRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVES
        +         +E  +  + W PPP  F K+NVDA+ +      G+G + R+  G  +V      +    + + EA A++ GL   L +    L  +I+E+
Subjt:  IRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVES

Query:  DSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAGSS
        D +EV    N +     E  + ++DI        + +    PR  NS AHSLA+ A  SS
Subjt:  DSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAGSS

TrEMBL top hitse value%identityAlignment
A0A2K2DU38 RNase H domain-containing protein (Fragment)6.5e-2427.13Show/hide
Query:  RVEALID--NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEA---------------SSSIDFGQKERLK
        +V  LID  +GD ++ L+  +F P D   IL+IP      +D V W L    +FSV+SAYH  +     + +                   DF    ++K
Subjt:  RVEALID--NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEA---------------SSSIDFGQKERLK

Query:  -------------------RESPVHLLWRCKFIREVWGR--YFPNIKEAVFSCREEEEAV--LVCDRIS-RGMSSEEIEKAAIIIWAIWNYRNKISMGTD
                           R   + L++ C   +EVW +     +I EAV   R     +  L+C  ++ +G     +E   I+ W +W  R +     D
Subjt:  -------------------RESPVHLLWRCKFIREVWGR--YFPNIKEAVFSCREEEEAV--LVCDRIS-RGMSSEEIEKAAIIIWAIWNYRNKISMGTD

Query:  QPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIRE
        +P   TLS  I   +     +     + ++  +      W  PP +FVKINVDAS++     G +G + RD+ G  +VA   KL     + S E  A++ 
Subjt:  QPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIRE

Query:  GLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA
        GL   ++       +II+  D+LEVV+ALN      S +  +  +   L    G +  + C R +NS+AH LAR A
Subjt:  GLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA

A0A5C7IST2 RNase H domain-containing protein1.0e-2129.71Show/hide
Query:  VEALIDN-GDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRCKFIREV
        V  LI++ G  N  LIR NF+P + + IL+IP+    R+D  +W     G F+VKSAY +A       EA  S       R   E+  H LWRCK ++  
Subjt:  VEALIDN-GDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRCKFIREV

Query:  WGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIII---WAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEA--IAESQAN
        W          +FS   + +      R+    S   +E     I   W +WN RN           Q+L R+  +   D    + T  L      E+Q N
Subjt:  WGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIII---WAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEA--IAESQAN

Query:  HNA--------WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKA
         +A        W PP    +K+NVDA+ +   N+  VG + RDS G  + +              EA  I EGL   L ++   L  + +ESDSL VV+ 
Subjt:  HNA--------WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKA

Query:  LNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAG
         N EI   ++   ++ DI  L +    ++    PR+ N +AH +AR A G
Subjt:  LNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAG

B8BBX0 Reverse transcriptase domain-containing protein2.7e-2228.47Show/hide
Query:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASS--------------SIDFGQKER
        +KW  V  L+D NG+ + H I+  F+P DV++IL+I     +  D V W  +  G FSV+SAYHLA  L +   +SS              S    QK R
Subjt:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASS--------------SIDFGQKER

Query:  L--------------------------------KRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN
        +                                + E   H L RC   + +W          V + R    A  + D IS  +S EE     +++W IW 
Subjt:  L--------------------------------KRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN

Query:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR---DTNLLE-------AIAESQANHN-------AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL
         RN+I+ G      +   R I   +   L+IR   D NL +       A A +Q NH         W  P   ++K+NVD S++     GG+G + R+S 
Subjt:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR---DTNLLE-------AIAESQANHN-------AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL

Query:  GSPVVAGCAKLQRNWPIKSLEA--LAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHS
        G  + A C  + R  P+ +LEA  +A +EG+   L+    FL  IIVE+D LE+VK +  + +  S+  FL+ +I  L          K  R+ +   H 
Subjt:  GSPVVAGCAKLQRNWPIKSLEA--LAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHS

Query:  LARVAAGSSSV
        LA      S +
Subjt:  LARVAAGSSSV

B9FYJ3 Uncharacterized protein1.1e-2025Show/hide
Query:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFG------------------
        L+W  V  LID +G  +   I ++F+P D + IL I +     +D + W  +  G FSV+SAYHLA  L    + SSS   G                  
Subjt:  LKWGRVEALID-NGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFG------------------

Query:  ----------------QKER------------LKRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN
                        +K+R            ++ E  VH L+ C   R++W     +++    S     ++ ++ D + +    +++    +++W IW+
Subjt:  ----------------QKER------------LKRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWN

Query:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR--------------DTNLLEAIAESQANHNA---WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL
         RN+I  G   P      R I+  +    +I+              D  L ++ +  ++   A   W+ P    +K+NVD S+ E   +GG+G + R+  
Subjt:  YRNKISMGTDQPNFQTLSRQIKRQMEDHLKIR--------------DTNLLEAIAESQANHNA---WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSL

Query:  GSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLA
        G  + A C  +        +E LA R+GL   L   Q  L  I++E+D L +V         +SE  FL+ +I  L       +F KC R+ N I+H LA
Subjt:  GSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLA

M5XSK0 Reverse transcriptase domain-containing protein1.8e-2627.2Show/hide
Query:  DNGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRC---KFIREVWGR
        D+ + N  L++N F P +V  I +IP+      D +VW  + KG+F+VKSAYH+A  LH +   +SS +     R        LLW+      ++  W R
Subjt:  DNGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFGQKERLKRESPVHLLWRC---KFIREVWGR

Query:  YFPNIKEAVFSCREE----EEAVLVCD---------------------------RISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKR
            I     +   +    +E  ++C+                           R +  +SS++     ++ WAIW  RN +     +   + +S     
Subjt:  YFPNIKEAVFSCREE----EEAVLVCD---------------------------RISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKR

Query:  QMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCA-KLQRNWPIKSLEALAIREGLHAYLSSSQKF
        ++ D L++  +N L + +        W PP  N +KINVD +W     +GGVG + RDS G   VAGCA KL   +    +EALA R      + + ++ 
Subjt:  QMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCA-KLQRNWPIKSLEALAIREGLHAYLSSSQKF

Query:  LDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA
           ++ ESD+L++V AL +   + S    ++ D   L        F    R +N +AH LAR A
Subjt:  LDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.7e-1226.2Show/hide
Query:  RESPVHLLWRCKFIREVW----------GRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQ
        RE+  HLL++C F R VW          G +  ++   ++     E  +    +I              ++W +W  RN++     + +   +   ++R 
Subjt:  RESPVHLLWRCKFIREVW----------GRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQ

Query:  MEDHLKIRDTNLLEAIAES-QANHN---AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQ
        MED  +      LE  A   Q   N    W  PP  +VK N DA+W     + G+GWI R+  G  +  G   L R   +   E  A+R    A L+ S+
Subjt:  MEDHLKIRDTNLLEAIAES-QANHN---AWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQ

Query:  KFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAGSSS
            +II ESD+  +V  LN + +        L DI QL        F   PR  N +A  +AR +   S+
Subjt:  KFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAGSSS

AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.7e-0428.41Show/hide
Query:  IKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAI
        +K + +D++K   T          +  + W  P   +VK N D S +      G+ WI R+S G+ +  GC K Q    IK  E  A+
Subjt:  IKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAI

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)3.2e-0725.78Show/hide
Query:  IWAIWNYRN--------KISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSP
        +W +W  RN        +      Q   Q  +  ++  + D      T   +           W+PPP  ++K N D+ + +  +     WI RDS G  
Subjt:  IWAIWNYRN--------KISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSP

Query:  VVAGCAKLQRNWPIKSLEALAIREGLHA
        + +GCAKLQ+++     EAL     LHA
Subjt:  VVAGCAKLQRNWPIKSLEALAIREGLHA

AT4G29090.1 Ribonuclease H-like superfamily protein8.4e-1627.24Show/hide
Query:  RESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIII----WAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLK
        +E+  HLL++C F R  W     +I   +     +   V +    + G  + + EKA+ ++    W +W  RN++     + N Q + R+ +  +E+  +
Subjt:  RESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIII----WAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLK

Query:  IRDTNLLEAIAESQANHNA---WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQII
        IR T       + Q N ++   W PPP  +VK N DA+WN    + G+GW+ R+  G     G   L +   +   E  A+R    A LS S+   + +I
Subjt:  IRDTNLLEAIAESQANHNA---WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQII

Query:  VESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLAR
         ESDS  +++ LN++ E        + D+ +L +      FV  PR  N++A  +AR
Subjt:  VESDSLEVVKALNHEIEEESESNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLAR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-0925.74Show/hide
Query:  IIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNA-------WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSP
        ++W IW   N +     +  FQT         ++ L    TN      +   N NA       W+PP R+ +K N DAS +E     G+GWI R+S G+ 
Subjt:  IIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLEAIAESQANHNA-------WTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSP

Query:  VVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQ--LAAFAGASAFVKCPRASNSIAHSLAR
        +  G  K Q     +  E   +   + A      K   ++I E D+  + + +N +       +FL  D +Q  + +F       K  R  N  A  LA+
Subjt:  VVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESESNFLLNDIVQ--LAAFAGASAFVKCPRASNSIAHSLAR

Query:  VA
         A
Subjt:  VA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCGTACGAGATTTTTACAAATGAATGCACGGTGGAGTTAGCATCACTCGATAAGAAAATAATATTTGTGTTCCCTGAGATCTTAAAATGGGGAAGAGTGGAAGC
CTTGATAGATAATGGGGACTTGAATGTTCATCTCATCAGAAACAACTTTATCCCCGCAGATGTGGATGAAATTCTTGCCATTCCCATTGGTGGTGGGAATAGGAAAGATG
AGGTAGTGTGGGCTTTAGAACCCAAAGGAGTCTTTTCGGTCAAAAGTGCATATCACCTTGCCTATCAACTCCACCACGCTAAAGAAGCTTCGAGTTCCATCGATTTTGGT
CAAAAGGAAAGGTTGAAGCGGGAGAGCCCGGTGCATTTGCTTTGGAGATGCAAATTTATAAGGGAAGTATGGGGTCGTTACTTTCCTAATATTAAAGAGGCTGTCTTTTC
TTGTAGGGAGGAGGAGGAGGCTGTGCTCGTGTGCGACAGAATTTCGAGAGGAATGTCTTCCGAAGAGATAGAAAAGGCGGCCATTATCATCTGGGCAATATGGAACTACA
GAAACAAGATTTCTATGGGCACTGATCAACCAAATTTTCAGACCCTCTCAAGGCAGATTAAAAGACAGATGGAAGACCATCTCAAGATCAGAGATACGAACCTGTTGGAA
GCAATCGCAGAGAGTCAGGCGAATCATAATGCGTGGACCCCTCCCCCAAGGAATTTCGTGAAGATTAATGTTGATGCTTCATGGAATGAGCATCTGAATCAGGGAGGCGT
CGGGTGGATTGCTCGTGATTCGCTCGGATCTCCGGTGGTTGCAGGGTGTGCAAAATTGCAGAGGAATTGGCCAATTAAATCTTTGGAGGCGCTTGCAATTCGAGAAGGAC
TACATGCGTACCTGTCGTCGTCTCAAAAATTTTTAGATCAGATCATTGTTGAGTCTGATTCGCTTGAGGTGGTTAAGGCTCTGAACCATGAGATCGAGGAGGAGTCGGAG
TCCAATTTCTTGCTTAATGACATCGTTCAGTTGGCGGCTTTTGCAGGGGCTTCCGCTTTCGTCAAATGCCCACGGGCATCAAACTCAATCGCGCATTCTCTCGCGCGAGT
GGCGGCCGGATCTTCTTCCGTCTTCCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTCGTACGAGATTTTTACAAATGAATGCACGGTGGAGTTAGCATCACTCGATAAGAAAATAATATTTGTGTTCCCTGAGATCTTAAAATGGGGAAGAGTGGAAGC
CTTGATAGATAATGGGGACTTGAATGTTCATCTCATCAGAAACAACTTTATCCCCGCAGATGTGGATGAAATTCTTGCCATTCCCATTGGTGGTGGGAATAGGAAAGATG
AGGTAGTGTGGGCTTTAGAACCCAAAGGAGTCTTTTCGGTCAAAAGTGCATATCACCTTGCCTATCAACTCCACCACGCTAAAGAAGCTTCGAGTTCCATCGATTTTGGT
CAAAAGGAAAGGTTGAAGCGGGAGAGCCCGGTGCATTTGCTTTGGAGATGCAAATTTATAAGGGAAGTATGGGGTCGTTACTTTCCTAATATTAAAGAGGCTGTCTTTTC
TTGTAGGGAGGAGGAGGAGGCTGTGCTCGTGTGCGACAGAATTTCGAGAGGAATGTCTTCCGAAGAGATAGAAAAGGCGGCCATTATCATCTGGGCAATATGGAACTACA
GAAACAAGATTTCTATGGGCACTGATCAACCAAATTTTCAGACCCTCTCAAGGCAGATTAAAAGACAGATGGAAGACCATCTCAAGATCAGAGATACGAACCTGTTGGAA
GCAATCGCAGAGAGTCAGGCGAATCATAATGCGTGGACCCCTCCCCCAAGGAATTTCGTGAAGATTAATGTTGATGCTTCATGGAATGAGCATCTGAATCAGGGAGGCGT
CGGGTGGATTGCTCGTGATTCGCTCGGATCTCCGGTGGTTGCAGGGTGTGCAAAATTGCAGAGGAATTGGCCAATTAAATCTTTGGAGGCGCTTGCAATTCGAGAAGGAC
TACATGCGTACCTGTCGTCGTCTCAAAAATTTTTAGATCAGATCATTGTTGAGTCTGATTCGCTTGAGGTGGTTAAGGCTCTGAACCATGAGATCGAGGAGGAGTCGGAG
TCCAATTTCTTGCTTAATGACATCGTTCAGTTGGCGGCTTTTGCAGGGGCTTCCGCTTTCGTCAAATGCCCACGGGCATCAAACTCAATCGCGCATTCTCTCGCGCGAGT
GGCGGCCGGATCTTCTTCCGTCTTCCGTTAG
Protein sequenceShow/hide protein sequence
MDSYEIFTNECTVELASLDKKIIFVFPEILKWGRVEALIDNGDLNVHLIRNNFIPADVDEILAIPIGGGNRKDEVVWALEPKGVFSVKSAYHLAYQLHHAKEASSSIDFG
QKERLKRESPVHLLWRCKFIREVWGRYFPNIKEAVFSCREEEEAVLVCDRISRGMSSEEIEKAAIIIWAIWNYRNKISMGTDQPNFQTLSRQIKRQMEDHLKIRDTNLLE
AIAESQANHNAWTPPPRNFVKINVDASWNEHLNQGGVGWIARDSLGSPVVAGCAKLQRNWPIKSLEALAIREGLHAYLSSSQKFLDQIIVESDSLEVVKALNHEIEEESE
SNFLLNDIVQLAAFAGASAFVKCPRASNSIAHSLARVAAGSSSVFR