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Spg024109 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024109
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionclassical arabinogalactan protein 25
Genome locationscaffold13:2140048..2140473
RNA-Seq ExpressionSpg024109
SyntenySpg024109
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575045.1 hypothetical protein SDJN03_25684, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4273.05Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK                    SS FQELSPDIAPLLP++G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK+LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_022138732.1 classical arabinogalactan protein 25 [Momordica charantia]1.1e-4780.42Show/hide
Query:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP
        MASFWYCSALIMAFMAS LLALP  SL NPKSSTI SASPS  T T+ P+P SPFQELSP+IAPLLP+ G +IPSATGSIPTIPSNPSPPNPDEFEAP P
Subjt:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP

Query:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        D SALSPFGLPGSFA P ALPW  NSLLLL+G AL+ FSL LH
Subjt:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_022958905.1 classical arabinogalactan protein 25-like [Cucurbita moschata]1.2e-4172.34Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMA MASPLLALPSLPNPK                    SS FQELSPDIAPLLP++G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_023006472.1 classical arabinogalactan protein 25-like [Cucurbita maxima]1.2e-4174.47Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK       SPS             FQELSPDIAPLLP+TG +IPSATGSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NS LLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

XP_023547783.1 classical arabinogalactan protein 25-like [Cucurbita pepo subsp. pepo]4.9e-4373.76Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK                    SS FQELSPDIAPLLP++G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

TrEMBL top hitse value%identityAlignment
A0A1S3C8K2 classical arabinogalactan protein 255.4e-4071.33Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD
        MASFWYCSA+IM FMASPLLALPS+PN                   PKPSSPFQELSP+IAPLLP+TG  IPSATG SIPTIPSNPSPPNPD+FEA GPD
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD

Query:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH
        SSALSPFGLPGSFA P +LP   N  LLLL+GLAL  FS+HLH
Subjt:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH

A0A5A7SSC0 Classical arabinogalactan protein 255.4e-4071.33Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD
        MASFWYCSA+IM FMASPLLALPS+PN                   PKPSSPFQELSP+IAPLLP+TG  IPSATG SIPTIPSNPSPPNPD+FEA GPD
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATG-SIPTIPSNPSPPNPDEFEAPGPD

Query:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH
        SSALSPFGLPGSFA P +LP   N  LLLL+GLAL  FS+HLH
Subjt:  SSALSPFGLPGSFAAPKALPWSPN-SLLLLSGLALYGFSLHLH

A0A6J1CBZ0 classical arabinogalactan protein 255.4e-4880.42Show/hide
Query:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP
        MASFWYCSALIMAFMAS LLALP  SL NPKSSTI SASPS  T T+ P+P SPFQELSP+IAPLLP+ G +IPSATGSIPTIPSNPSPPNPDEFEAP P
Subjt:  MASFWYCSALIMAFMASPLLALP--SLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGP

Query:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        D SALSPFGLPGSFA P ALPW  NSLLLL+G AL+ FSL LH
Subjt:  DSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

A0A6J1H4T0 classical arabinogalactan protein 25-like5.8e-4272.34Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMA MASPLLALPSLPNPK                    SS FQELSPDIAPLLP++G SIPSA+GSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSP GLPGSFAAPK LP   NSLLLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

A0A6J1KVY5 classical arabinogalactan protein 25-like5.8e-4274.47Show/hide
Query:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS
        MASFWYC+A+IMAFMASPLLALPSLPNPK       SPS             FQELSPDIAPLLP+TG +IPSATGSIPTIPSNPSPPNPDEFEAPGPDS
Subjt:  MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDS

Query:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH
        SALSPFGLPGSFAAPK LP   NS LLL+ L+L+ F LHLH
Subjt:  SALSPFGLPGSFAAPKALPWSPNSLLLLSGLALYGFSLHLH

SwissProt top hitse value%identityAlignment
Q6NN00 Classical arabinogalactan protein 252.6e-0743.62Show/hide
Query:  FLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL
        F++ +S     S  Q+LSP+IAPLLP+ G ++PS  GS  TIPS+PSPP+PD  +   PD  A SPF  P   ++P   P  P++ +LL  L +
Subjt:  FLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL

Arabidopsis top hitse value%identityAlignment
AT5G18690.1 arabinogalactan protein 251.9e-0843.62Show/hide
Query:  FLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL
        F++ +S     S  Q+LSP+IAPLLP+ G ++PS  GS  TIPS+PSPP+PD  +   PD  A SPF  P   ++P   P  P++ +LL  L +
Subjt:  FLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKALPWSPNSLLLLSGLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCACCTTTGCTTGCTTTACCATCTCTACCCAATCCAAAATCCTCCACCATCACCTCAGCCTC
GCCATCATTTTTGACCGCCACCAGTCCTCCCAAGCCCAGCTCGCCTTTTCAAGAACTCTCCCCTGACATTGCTCCATTATTGCCTACTACAGGCGCTAGCATTCCTTCTG
CAACTGGTTCTATTCCCACCATTCCCTCCAACCCCAGCCCTCCAAATCCAGACGAGTTCGAGGCGCCTGGCCCTGATTCCTCCGCCCTCTCGCCATTTGGCCTACCGGGT
TCCTTCGCAGCACCTAAAGCCCTGCCTTGGTCTCCAAATTCGCTTCTTCTTCTATCTGGCTTAGCACTATATGGCTTCTCTCTGCACTTACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCACCTTTGCTTGCTTTACCATCTCTACCCAATCCAAAATCCTCCACCATCACCTCAGCCTC
GCCATCATTTTTGACCGCCACCAGTCCTCCCAAGCCCAGCTCGCCTTTTCAAGAACTCTCCCCTGACATTGCTCCATTATTGCCTACTACAGGCGCTAGCATTCCTTCTG
CAACTGGTTCTATTCCCACCATTCCCTCCAACCCCAGCCCTCCAAATCCAGACGAGTTCGAGGCGCCTGGCCCTGATTCCTCCGCCCTCTCGCCATTTGGCCTACCGGGT
TCCTTCGCAGCACCTAAAGCCCTGCCTTGGTCTCCAAATTCGCTTCTTCTTCTATCTGGCTTAGCACTATATGGCTTCTCTCTGCACTTACATTGA
Protein sequenceShow/hide protein sequence
MASFWYCSALIMAFMASPLLALPSLPNPKSSTITSASPSFLTATSPPKPSSPFQELSPDIAPLLPTTGASIPSATGSIPTIPSNPSPPNPDEFEAPGPDSSALSPFGLPG
SFAAPKALPWSPNSLLLLSGLALYGFSLHLH