; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024130 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024130
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:17129985..17133740
RNA-Seq ExpressionSpg024130
SyntenySpg024130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.0e-1426.59Show/hide
Query:  FVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVG------ITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSPA-----------
        FV+   K  Y  +  R   FE GF         +G      +T H W +F     P+N+ IV EFY+NI E      +VRG+++ ++P            
Subjt:  FVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVG------ITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSPA-----------

Query:  ---NT----------------------------------------------WLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCL
           NT                                              W  F K +L+PT+H++TVS  R+LL+ +IL   +ID+GKII    H CL
Subjt:  ---NT----------------------------------------------WLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCL

Query:  QKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQEAR
        +++   L F N IT LC++  V     D +L     ++   +  L   +EA+
Subjt:  QKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQEAR

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]4.0e-1428.21Show/hide
Query:  KYLEMLKRDFLFERGF------GDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSP--------------------
        +Y  +  R   FE GF        DL   +   +T H W +F      +N+ +V EFY+NI E      +V G+++ ++P                    
Subjt:  KYLEMLKRDFLFERGF------GDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSP--------------------

Query:  ---------ANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMD-KGIID
                    W  F K +LLPT+H++TVS  R++L+ +I+  L+ID+GKII  + H CL++    L F N IT L ++  V     D +L    G+  
Subjt:  ---------ANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMD-KGIID

Query:  TPNL----ARLQRTQEARQGGLVCDIHQIQEQLQ
          +L     R  + + ARQ  L      +  QLQ
Subjt:  TPNL----ARLQRTQEARQGGLVCDIHQIQEQLQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.5e-1831.27Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF
        KRV+    +AV+ E E     YE  + N           R    E+GF  D       LP   +V IT H W QFCA  E     +V EFYAN+ +    
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF

Query:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL
           VRGV V WS                                                             A  W  F K  LLPTTH  TVS+DR+L
Subjt:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL

Query:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQE
        L+ ++L   SI+VG++I SEI  C  +K G LFF + IT LC+    P    +  L + G ID   +AR+  TQE
Subjt:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.4e-1931.48Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF
        KRV+    +AV+ E E     YE  + N           R    E+GF  D       LP   +V IT H W QFCA  E     +V EFYAN+ + E  
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF

Query:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL
           VRGV V WS                                                             A  W  F K RLLPTTH  TVS+DR+L
Subjt:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL

Query:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARL
        L+ ++L   SI+VG++I SEI  C  +K G LFF + IT LC+    P    +  L + G ID   +AR+
Subjt:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.7e-1325.3Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGV
        +RV+   ++AV+ E +   + YE  + N   +     ++++F+++     + P ++   I  H W  FCA  E     +V EFY N+   +     +RGV
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGV

Query:  AV--------------------------------------------DWS----------------PANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILR
         V                                            +W+                PA  W  F K RLLPTTH  TVS++ V L++++L 
Subjt:  AV--------------------------------------------DWS----------------PANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILR

Query:  SLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKG
          SI+VG++I  EI  C  +K G LFF + IT +C+    P    +  L + G
Subjt:  SLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.2e-1831.27Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF
        KRV+    +AV+ E E     YE  + N           R    E+GF  D       LP   +V IT H W QFCA  E     +V EFYAN+ +    
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF

Query:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL
           VRGV V WS                                                             A  W  F K  LLPTTH  TVS+DR+L
Subjt:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL

Query:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQE
        L+ ++L   SI+VG++I SEI  C  +K G LFF + IT LC+    P    +  L + G ID   +AR+  TQE
Subjt:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.6e-1931.48Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF
        KRV+    +AV+ E E     YE  + N           R    E+GF  D       LP   +V IT H W QFCA  E     +V EFYAN+ + E  
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDD-------LPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGF

Query:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL
           VRGV V WS                                                             A  W  F K RLLPTTH  TVS+DR+L
Subjt:  QAIVRGVAVDWS------------------------------------------------------------PANTWLGFFKLRLLPTTHDSTVSRDRVL

Query:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARL
        L+ ++L   SI+VG++I SEI  C  +K G LFF + IT LC+    P    +  L + G ID   +AR+
Subjt:  LVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARL

A0A2P5DAQ2 Uncharacterized protein2.8e-1325.3Show/hide
Query:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGV
        +RV+   ++AV+ E +   + YE  + N   +     ++++F+++     + P ++   I  H W  FCA  E     +V EFY N+   +     +RGV
Subjt:  KRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGV

Query:  AV--------------------------------------------DWS----------------PANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILR
         V                                            +W+                PA  W  F K RLLPTTH  TVS++ V L++++L 
Subjt:  AV--------------------------------------------DWS----------------PANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILR

Query:  SLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKG
          SI+VG++I  EI  C  +K G LFF + IT +C+    P    +  L + G
Subjt:  SLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKG

A0A6A2ZUE4 Uncharacterized protein5.1e-1526.59Show/hide
Query:  FVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVG------ITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSPA-----------
        FV+   K  Y  +  R   FE GF         +G      +T H W +F     P+N+ IV EFY+NI E      +VRG+++ ++P            
Subjt:  FVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVG------ITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSPA-----------

Query:  ---NT----------------------------------------------WLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCL
           NT                                              W  F K +L+PT+H++TVS  R+LL+ +IL   +ID+GKII    H CL
Subjt:  ---NT----------------------------------------------WLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCL

Query:  QKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQEAR
        +++   L F N IT LC++  V     D +L     ++   +  L   +EA+
Subjt:  QKKVGKLFFLNTITMLCQRVGVPASTEDVVLMDKGIIDTPNLARLQRTQEAR

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein1.9e-1428.21Show/hide
Query:  KYLEMLKRDFLFERGF------GDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSP--------------------
        +Y  +  R   FE GF        DL   +   +T H W +F      +N+ +V EFY+NI E      +V G+++ ++P                    
Subjt:  KYLEMLKRDFLFERGF------GDDLPHYLRVGITNHGWDQFCAKLEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSP--------------------

Query:  ---------ANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMD-KGIID
                    W  F K +LLPT+H++TVS  R++L+ +I+  L+ID+GKII  + H CL++    L F N IT L ++  V     D +L    G+  
Subjt:  ---------ANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVPASTEDVVLMD-KGIID

Query:  TPNL----ARLQRTQEARQGGLVCDIHQIQEQLQ
          +L     R  + + ARQ  L      +  QLQ
Subjt:  TPNL----ARLQRTQEARQGGLVCDIHQIQEQLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGGAGTAGGGTGATCGTCAAACAGAAGTTCAAGAACAGCAGGTTCAGGAAGAGGTTCTGTTTCTGTGAGTGCGAAATTTCTTTGAGTTCTGAAATGGCAAAAAC
AAGAGGAGGGAAAGAAAGGGAAGTTGAGGAGGAAGAGGTACCGGTTACGCCTGAAAAACCAAAGAAGAAAACGAAGAGAAGGAAAATGCCTGAGGAAAGAGAAGCCAAGC
GGCTAACAAGGCAGCAACAAACTGAGGTTACAGAAGTTCTGCAAAAAGCAATCGAGGATATTACAGAAGAAGTAGCCGGGGAAGAGCAACCAGCAGACCCTGAAGAAGGA
AAAAGGGTTCGGACGGACACTCCGTCTCTACCCACCACTGAATCAGAGAAGGAAAACACAGAAAAAGAGGATCAAGAAAAGAAAGAAATTGAAAAGAAAGCCGAAGAGGA
CAGAGGCAAAAGAGTTTCCGAAGCAACAGCCGAAGCAGTAGAAGAAGAAATTGAGGAACAACGGTTGCCATACGAACGTTTCGTCAACAATATTTACAAAGCAAAATATT
TAGAAATGCTGAAGAGGGATTTCTTGTTTGAAAGAGGGTTTGGAGATGACCTACCACATTACTTGAGAGTCGGGATCACAAATCACGGATGGGATCAGTTTTGTGCTAAG
CTGGAGCCAATCAACTCAAATATAGTTCACGAATTCTACGCGAATATTGACGAAGAAGAGGGCTTCCAGGCAATTGTTCGAGGAGTCGCGGTGGATTGGAGCCCAGCGAA
CACATGGCTGGGTTTTTTTAAGTTGCGTCTTCTGCCGACAACCCATGACTCTACTGTCTCCCGTGATCGCGTTCTCCTGGTTTTCGCTATTCTGAGGTCATTAAGCATTG
ATGTTGGCAAAATTATTTCCAGCGAGATTCACACTTGCTTGCAGAAAAAGGTGGGCAAGCTTTTCTTTCTGAACACAATAACTATGCTCTGTCAAAGAGTTGGGGTTCCT
GCGAGTACAGAAGATGTTGTCCTGATGGATAAGGGAATAATAGACACGCCAAACCTGGCAAGGCTTCAGCGGACTCAGGAAGCACGCCAAGGCGGTTTGGTGTGCGACAT
CCACCAGATTCAAGAGCAACTGCAAATGCATTCCAACCGTATGGAGTTTGCCGAGAGCATTCCTTCTAGTCTGGTCATCGCTGTGGCAAGAAGTTCTGAGCAGTGCATGG
TTTTGCAGGATGCTCAATGCTCGATCGGTAGAGCGTCATTGGAGTTGAAACACATTCCAAAAGATTCAGAGTTCCGGGAGGATCCTGCTGATAAGACTGCGAGAGTTTGC
CTTATCAATACAATTGCTAGAGCATCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTGGAGTAGGGTGATCGTCAAACAGAAGTTCAAGAACAGCAGGTTCAGGAAGAGGTTCTGTTTCTGTGAGTGCGAAATTTCTTTGAGTTCTGAAATGGCAAAAAC
AAGAGGAGGGAAAGAAAGGGAAGTTGAGGAGGAAGAGGTACCGGTTACGCCTGAAAAACCAAAGAAGAAAACGAAGAGAAGGAAAATGCCTGAGGAAAGAGAAGCCAAGC
GGCTAACAAGGCAGCAACAAACTGAGGTTACAGAAGTTCTGCAAAAAGCAATCGAGGATATTACAGAAGAAGTAGCCGGGGAAGAGCAACCAGCAGACCCTGAAGAAGGA
AAAAGGGTTCGGACGGACACTCCGTCTCTACCCACCACTGAATCAGAGAAGGAAAACACAGAAAAAGAGGATCAAGAAAAGAAAGAAATTGAAAAGAAAGCCGAAGAGGA
CAGAGGCAAAAGAGTTTCCGAAGCAACAGCCGAAGCAGTAGAAGAAGAAATTGAGGAACAACGGTTGCCATACGAACGTTTCGTCAACAATATTTACAAAGCAAAATATT
TAGAAATGCTGAAGAGGGATTTCTTGTTTGAAAGAGGGTTTGGAGATGACCTACCACATTACTTGAGAGTCGGGATCACAAATCACGGATGGGATCAGTTTTGTGCTAAG
CTGGAGCCAATCAACTCAAATATAGTTCACGAATTCTACGCGAATATTGACGAAGAAGAGGGCTTCCAGGCAATTGTTCGAGGAGTCGCGGTGGATTGGAGCCCAGCGAA
CACATGGCTGGGTTTTTTTAAGTTGCGTCTTCTGCCGACAACCCATGACTCTACTGTCTCCCGTGATCGCGTTCTCCTGGTTTTCGCTATTCTGAGGTCATTAAGCATTG
ATGTTGGCAAAATTATTTCCAGCGAGATTCACACTTGCTTGCAGAAAAAGGTGGGCAAGCTTTTCTTTCTGAACACAATAACTATGCTCTGTCAAAGAGTTGGGGTTCCT
GCGAGTACAGAAGATGTTGTCCTGATGGATAAGGGAATAATAGACACGCCAAACCTGGCAAGGCTTCAGCGGACTCAGGAAGCACGCCAAGGCGGTTTGGTGTGCGACAT
CCACCAGATTCAAGAGCAACTGCAAATGCATTCCAACCGTATGGAGTTTGCCGAGAGCATTCCTTCTAGTCTGGTCATCGCTGTGGCAAGAAGTTCTGAGCAGTGCATGG
TTTTGCAGGATGCTCAATGCTCGATCGGTAGAGCGTCATTGGAGTTGAAACACATTCCAAAAGATTCAGAGTTCCGGGAGGATCCTGCTGATAAGACTGCGAGAGTTTGC
CTTATCAATACAATTGCTAGAGCATCTTTTTAA
Protein sequenceShow/hide protein sequence
MCWSRVIVKQKFKNSRFRKRFCFCECEISLSSEMAKTRGGKEREVEEEEVPVTPEKPKKKTKRRKMPEEREAKRLTRQQQTEVTEVLQKAIEDITEEVAGEEQPADPEEG
KRVRTDTPSLPTTESEKENTEKEDQEKKEIEKKAEEDRGKRVSEATAEAVEEEIEEQRLPYERFVNNIYKAKYLEMLKRDFLFERGFGDDLPHYLRVGITNHGWDQFCAK
LEPINSNIVHEFYANIDEEEGFQAIVRGVAVDWSPANTWLGFFKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIHTCLQKKVGKLFFLNTITMLCQRVGVP
ASTEDVVLMDKGIIDTPNLARLQRTQEARQGGLVCDIHQIQEQLQMHSNRMEFAESIPSSLVIAVARSSEQCMVLQDAQCSIGRASLELKHIPKDSEFREDPADKTARVC
LINTIARASF