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Spg024205 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024205
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pro-like protein
Genome locationscaffold4:16903934..16909782
RNA-Seq ExpressionSpg024205
SyntenySpg024205
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]4.2e-1258.82Show/hide
Query:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL
        E+ + H SK + M T ++  GGY LN+NLE L   PSN G FGLGYKP+  DKIRLQEEKK+KRL +L
Subjt:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL

KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]1.1e-1750Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNASSLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M+++++  L GE +  E      F P+PLT  YQ+N N SS  NP+ + +QVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNASSLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]3.9e-1853.85Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M++ ++ AL  E S    E  +SF P+PLT  YQ++HN S S  NP+ +TIQVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]3.2e-1258.82Show/hide
Query:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL
        E+ + H SK + M T ++  GGY LN+NLE L  IPSN G FGLGYKP+  DKIRLQE+KK+KRL +L
Subjt:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]6.6e-1853.85Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M++ ++ AL  E S    E  +SF P+PLT  YQ++HN S S  NP+ +TIQVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

TYK27304.1 uncharacterized protein E5676_scaffold1784G00170 [Cucumis melo var. makuwa]1.9e-1753.33Show/hide
Query:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        ++ ++ AL  E S  E    +SF P+PLT  YQ++HN S S  NP+ +TIQV  PFKFKD+KA+PWRY CQ +T PS+++IIG+SGIT+S
Subjt:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

XP_031737550.1 uncharacterized protein LOC116402440 [Cucumis sativus]1.1e-1750Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNASSLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M+++++  L GE +  E      F P+PLT  YQ+N N SS  NP+ + +QVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNASSLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

TrEMBL top hitse value%identityAlignment
A0A5A7T7R4 Ribonuclease H2.0e-1258.82Show/hide
Query:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL
        E+ + H SK + M T ++  GGY LN+NLE L   PSN G FGLGYKP+  DKIRLQEEKK+KRL +L
Subjt:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL

A0A5A7T7R4 Ribonuclease H9.3e-1853.33Show/hide
Query:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        ++ ++ AL  E S  E    +SF P+PLT  YQ++HN S S  NP+ +TIQV  PFKFKD+KA+PWRY CQ +T PS+++IIG+SGIT+S
Subjt:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

A0A5A7T858 Uncharacterized protein9.3e-1853.33Show/hide
Query:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        ++ ++ AL  E S  E    +SF P+PLT  YQ++HN S S  NP+ +TIQV  PFKFKD+KA+PWRY CQ +T PS+++IIG+SGIT+S
Subjt:  REDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

A0A5A7TRL7 Ribonuclease H1.2e-1752.75Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M++ ++ AL  E S    E  +SF P+PLT  YQ++HN S S  NP+ + IQVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

A0A5A7TRL7 Ribonuclease H1.4e-1055.88Show/hide
Query:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL
        E+ + H SK + M T ++   GY LN+NLE L   PSN G FGLGYK +  DKIRLQEEKK+KRL +L
Subjt:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.9e-1853.85Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M++ ++ AL  E S    E  +SF P+PLT  YQ++HN S S  NP+ +TIQVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.5e-1258.82Show/hide
Query:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL
        E+ + H SK + M T ++  GGY LN+NLE L  IPSN G FGLGYKP+  DKIRLQE+KK+KRL +L
Subjt:  ELTRSHMSKAKEMETEVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRL

A0A5D3DEB3 Retrotrans_gag domain-containing protein3.2e-1853.85Show/hide
Query:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS
        M++ ++ AL  E S    E  +SF P+PLT  YQ++HN S S  NP+ +TIQVP PFKFKD+KA+PWRY CQ +T PS+++I G+SGIT+S
Subjt:  MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNAS-SLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAAGACGAAGTCAGCGCATTAACAGGAGAGTCTTCTTCCCACGAAAGGGAAGTAATTGAGTCCTTCCCACCAAAGCCTTTGACTACCATATACCAAGATAATCA
TAATGCTTCATCTCTTCAGAATCCTCGACCTATCACAATTCAAGTGCCTGGTCCTTTCAAGTTTAAGGACATGAAAGCAATACCATGGAGATATGTGTGTCAAACTCTTA
CAAATCCATCAATTAACAGCATTATAGGAGTTAGTGGAATAACTCAGAGTGTGGGAGGAGGGATTGAATTGACAAGATCTCACATGTCTAAGGCGAAAGAAATGGAAACT
GAAGTAGTGGTAAAGGGAGGATATCAGTTGAATCAAAACTTAGAAAGGTTGCAGAGCATACCTAGCAATATTGGGACATTTGGGTTGGGCTATAAGCCTACCAAATGTGA
TAAAATTAGACTTCAAGAAGAAAAGAAAGAAAAGCGATTGGTCAGATTAAATTCACCAACTGCTTGTGAAATAATCACGAATTATTGCGAACACTACCACTATGGCTACA
CCGATATGACTCTGAGACTACTAGAGTCAGGAGACTGGTGGGAGCCTTCAGGAGAATTCTCTGAGAGTAGGAGAATGAATGGGATGCTTTCACCCCACCCCAGGGGTCCT
ATTTATAAGAAAAGGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAAGACGAAGTCAGCGCATTAACAGGAGAGTCTTCTTCCCACGAAAGGGAAGTAATTGAGTCCTTCCCACCAAAGCCTTTGACTACCATATACCAAGATAATCA
TAATGCTTCATCTCTTCAGAATCCTCGACCTATCACAATTCAAGTGCCTGGTCCTTTCAAGTTTAAGGACATGAAAGCAATACCATGGAGATATGTGTGTCAAACTCTTA
CAAATCCATCAATTAACAGCATTATAGGAGTTAGTGGAATAACTCAGAGTGTGGGAGGAGGGATTGAATTGACAAGATCTCACATGTCTAAGGCGAAAGAAATGGAAACT
GAAGTAGTGGTAAAGGGAGGATATCAGTTGAATCAAAACTTAGAAAGGTTGCAGAGCATACCTAGCAATATTGGGACATTTGGGTTGGGCTATAAGCCTACCAAATGTGA
TAAAATTAGACTTCAAGAAGAAAAGAAAGAAAAGCGATTGGTCAGATTAAATTCACCAACTGCTTGTGAAATAATCACGAATTATTGCGAACACTACCACTATGGCTACA
CCGATATGACTCTGAGACTACTAGAGTCAGGAGACTGGTGGGAGCCTTCAGGAGAATTCTCTGAGAGTAGGAGAATGAATGGGATGCTTTCACCCCACCCCAGGGGTCCT
ATTTATAAGAAAAGGTCATGA
Protein sequenceShow/hide protein sequence
MREDEVSALTGESSSHEREVIESFPPKPLTTIYQDNHNASSLQNPRPITIQVPGPFKFKDMKAIPWRYVCQTLTNPSINSIIGVSGITQSVGGGIELTRSHMSKAKEMET
EVVVKGGYQLNQNLERLQSIPSNIGTFGLGYKPTKCDKIRLQEEKKEKRLVRLNSPTACEIITNYCEHYHYGYTDMTLRLLESGDWWEPSGEFSESRRMNGMLSPHPRGP
IYKKRS