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Spg024209 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024209
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:19795296..19798936
RNA-Seq ExpressionSpg024209
SyntenySpg024209
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.7e-1037.17Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K  LLPTTH  T S++R+LL  ++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L + G ID   +AR+ +       
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R  TA+S
Subjt:  GASLKARSKTATS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-1038.05Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S++R+LL  ++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L + G ID   +AR+ +       
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R  TA+S
Subjt:  GASLKARSKTATS

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.6e-1037.17Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S++R+LL +++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L   G ID   +AR+ +  +    
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R   A+S
Subjt:  GASLKARSKTATS

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.1e-1037.04Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S+ERVLL +++L   +I+VG+II  EI     +K G LFFP+ I+ +C  A  P       L + G ID   +AR+ +   A   
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE
             +R   A+S   S        E    L+SLE
Subjt:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]5.5e-1136.3Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH    S+E VLL +++L   +I+VG+II  EI  C  +K G LFFP+ I+ +C+ A  P       L + G ID   +AR+ +   A   
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE
          S  +R   A+S   +        E    L+SLE
Subjt:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1037.17Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K  LLPTTH  T S++R+LL  ++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L + G ID   +AR+ +       
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R  TA+S
Subjt:  GASLKARSKTATS

A0A2P5BCG4 Uncharacterized protein (Fragment)6.0e-1138.05Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S++R+LL  ++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L + G ID   +AR+ +       
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R  TA+S
Subjt:  GASLKARSKTATS

A0A2P5CEY2 Uncharacterized protein1.7e-1037.17Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S++R+LL +++L   +I+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P       L   G ID   +AR+ +  +    
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATS
             +R   A+S
Subjt:  GASLKARSKTATS

A0A2P5CPE8 Uncharacterized protein1.0e-1037.04Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH  T S+ERVLL +++L   +I+VG+II  EI     +K G LFFP+ I+ +C  A  P       L + G ID   +AR+ +   A   
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE
             +R   A+S   S        E    L+SLE
Subjt:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE

A0A2P5CXU3 Uncharacterized protein (Fragment)2.7e-1136.3Show/hide
Query:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW
        F+K RLLPTTH    S+E VLL +++L   +I+VG+II  EI  C  +K G LFFP+ I+ +C+ A  P       L + G ID   +AR+ +   A   
Subjt:  FIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQW

Query:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE
          S  +R   A+S   +        E    L+SLE
Subjt:  GASLKARSKTATSQLVSHFNEPKFVEPFSNLRSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCATCAAACAAAGGCTGCTTCCAACGACTCATGACTCCACGGACTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAACATCGATGTAGG
TAAAATTATTGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTTGGAAAATTGTTCTTTCCAAACACAATTTCAATGTTGTGTAAGAGAGCAGGGGTTCCAGAGAGCG
CAGAATACGTGCTCCTACTGGACAAGGGAGTAATCGACACGCCTAACTTGGCACGGCTTCAGCGGAGACAGGAAGCACGTCAGTGGGGGGCTAGTCTCAAAGCAAGGAGC
AAAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGTTGAGCCATTTTCGAATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAATTTGACCTAAT
TAAGGCTTGCTATCACTCTATAAAAGGGAGAGCCGTCTCAAGTCAAAATCATTCCATTCTTGGAGAAGGAAGTCCTATTCCATTCGTGTTGTTTAGGAGTTGTTGGGCGT
CACACCGCAATACCGCAAGTGCACGGGCCGCAAGCCCGGATTTGGGACAGCGTCGCGACGCTATTGGCACAGCGTCACGACGTTGTGACGTCACTCAACTTGCTGGTCAA
GAAATGGGACAGCATCTCAACGCTGTGCGGTTTTCAGACCAGGCTAGAGTAGATTGGGCTTCAAATTGGGCCTTTCTTCATTTCTTTTTGGATCTTCTTTATATGGTTGA
CTTCTTGGACTCCCCCTTGACCCATGTATCGAAATTTGGGCTTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCATCAAACAAAGGCTGCTTCCAACGACTCATGACTCCACGGACTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAACATCGATGTAGG
TAAAATTATTGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTTGGAAAATTGTTCTTTCCAAACACAATTTCAATGTTGTGTAAGAGAGCAGGGGTTCCAGAGAGCG
CAGAATACGTGCTCCTACTGGACAAGGGAGTAATCGACACGCCTAACTTGGCACGGCTTCAGCGGAGACAGGAAGCACGTCAGTGGGGGGCTAGTCTCAAAGCAAGGAGC
AAAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGTTGAGCCATTTTCGAATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAATTTGACCTAAT
TAAGGCTTGCTATCACTCTATAAAAGGGAGAGCCGTCTCAAGTCAAAATCATTCCATTCTTGGAGAAGGAAGTCCTATTCCATTCGTGTTGTTTAGGAGTTGTTGGGCGT
CACACCGCAATACCGCAAGTGCACGGGCCGCAAGCCCGGATTTGGGACAGCGTCGCGACGCTATTGGCACAGCGTCACGACGTTGTGACGTCACTCAACTTGCTGGTCAA
GAAATGGGACAGCATCTCAACGCTGTGCGGTTTTCAGACCAGGCTAGAGTAGATTGGGCTTCAAATTGGGCCTTTCTTCATTTCTTTTTGGATCTTCTTTATATGGTTGA
CTTCTTGGACTCCCCCTTGACCCATGTATCGAAATTTGGGCTTGGATAG
Protein sequenceShow/hide protein sequence
MGFIKQRLLPTTHDSTDSRERVLLAFAILRSLNIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRAGVPESAEYVLLLDKGVIDTPNLARLQRRQEARQWGASLKARS
KTATSQLVSHFNEPKFVEPFSNLRSLESLPRVQFDLIKACYHSIKGRAVSSQNHSILGEGSPIPFVLFRSCWASHRNTASARAASPDLGQRRDAIGTASRRCDVTQLAGQ
EMGQHLNAVRFSDQARVDWASNWAFLHFFLDLLYMVDFLDSPLTHVSKFGLG