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Spg024217 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024217
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEndo/exonuclease/phosphatase domain-containing protein
Genome locationscaffold4:21080198..21081973
RNA-Seq ExpressionSpg024217
SyntenySpg024217
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC70889.1 hypothetical protein OsI_02427 [Oryza sativa Indica Group]4.9e-1334.04Show/hide
Query:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNS
        M  L WN RGLG P     +   +   +P L  LS T+     +  L  RL         A  GE   G +   W E             T  +  +  S
Subjt:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNS

Query:  LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK
         + +G      +  EIKEIK+K+++      PI+ D  I +L  RLD LL  EEM W QRS  SWLK GDRNT++FH++A  + K+ K
Subjt:  LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK

KAF5441799.1 hypothetical protein F2P56_036996, partial [Juglans regia]1.6e-0831.3Show/hide
Query:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDR
        ++E W E K ++       V   + +   +L+ W   +N    +EIK    K+K+  +  GP++ D I ++ R+L+ LL +E  +W+QR+   WL+ GDR
Subjt:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDR

Query:  NTRWFHQKAFDKEKQ
        NT++FH  A  ++K+
Subjt:  NTRWFHQKAFDKEKQ

MCH87735.1 hypothetical protein [Trifolium medium]4.3e-0927.51Show/hide
Query:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEW-KSFVTSEIGTMCN
        M+ L WN +G G+P   R +   ++   P +  L ETK     L+   + LN F   +++  +     G +   W  W +++  +W  S + +++     
Subjt:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEW-KSFVTSEIGTMCN

Query:  SLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHR-LGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK
         L  WG  +   +  +IK+ +  ++   +     +  A+ +   + +D LL  EEM+W QRS   WLK GD+NTR+FHQKA  ++++ K
Subjt:  SLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHR-LGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK

XP_015384098.1 uncharacterized protein LOC107176315 [Citrus sinensis]9.6e-0940Show/hide
Query:  LKGWGGSQNRRLKNEIKEIKSKIK------DSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRKSW
        LKGW   +    K E+K ++ +++      + YD       D   RL  R+ NLL++EEMYWKQRS   WLK GD+NT++FH KA  ++++ K W
Subjt:  LKGWGGSQNRRLKNEIKEIKSKIK------DSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRKSW

XP_019177860.1 PREDICTED: uncharacterized protein LOC109173056 [Ipomoea nil]1.6e-0835.45Show/hide
Query:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNS-LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGD
        +EE  ++   E W +       +  T+C   L  WGG   RR  N I+E++S++    + R P   D    +   L+ LL +EE++WKQRS + WLK GD
Subjt:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNS-LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGD

Query:  RNTRWFHQKA
         NT +FH+ A
Subjt:  RNTRWFHQKA

TrEMBL top hitse value%identityAlignment
A0A2I4F3E3 uncharacterized protein LOC1089951267.9e-0931.3Show/hide
Query:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDR
        ++E W E K ++       V   + +   +L+ W   +N    +EIK    K+K+  +  GP++ D I ++ R+L+ LL +E  +W+QR+   WL+ GDR
Subjt:  IEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDR

Query:  NTRWFHQKAFDKEKQ
        NT++FH  A  ++K+
Subjt:  NTRWFHQKAFDKEKQ

A0A392MKX6 Endo/exonuclease/phosphatase domain-containing protein (Fragment)2.1e-0927.51Show/hide
Query:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEW-KSFVTSEIGTMCN
        M+ L WN +G G+P   R +   ++   P +  L ETK     L+   + LN F   +++  +     G +   W  W +++  +W  S + +++     
Subjt:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEW-KSFVTSEIGTMCN

Query:  SLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHR-LGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK
         L  WG  +   +  +IK+ +  ++   +     +  A+ +   + +D LL  EEM+W QRS   WLK GD+NTR+FHQKA  ++++ K
Subjt:  SLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHR-LGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK

A0A803PI64 Uncharacterized protein1.0e-0831.2Show/hide
Query:  EEAWSEWK-----LEK-WMEWKSFVTS-----EIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRS
        EEAW E       +EK W EW   ++      + G +  +L  W   + + L  +IK++K+ + +      P  +  + ++ ++L+ +L ++E YW+QRS
Subjt:  EEAWSEWK-----LEK-WMEWKSFVTS-----EIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRS

Query:  MESWLKWGDRNTRWFHQKAFDKEKQ
           WLKWGD NT++FH+KA  + K+
Subjt:  MESWLKWGDRNTRWFHQKAFDKEKQ

B8AA89 CCHC-type domain-containing protein2.4e-1334.04Show/hide
Query:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNS
        M  L WN RGLG P     +   +   +P L  LS T+     +  L  RL         A  GE   G +   W E             T  +  +  S
Subjt:  MKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNS

Query:  LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK
         + +G      +  EIKEIK+K+++      PI+ D  I +L  RLD LL  EEM W QRS  SWLK GDRNT++FH++A  + K+ K
Subjt:  LKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRK

B8APD4 Reverse transcriptase domain-containing protein7.9e-0933.77Show/hide
Query:  LPGAIEEAWSEWKLEKWMEWKSF--VTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMES
        L   I+ AW     EK +E +    VTS++  +  +L+ W  +    +  E+KEIK+K+++      P+  DA I  L  R+D LL  EEM W QRS  +
Subjt:  LPGAIEEAWSEWKLEKWMEWKSF--VTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDA-IHRLGRRLDNLLLEEEMYWKQRSMES

Query:  WLKWGDRNTRWFHQKAFDKEKQRK----SWNSPEMRKAKMKCDRISPQPFSTLY
        WLK GDRNT++FH++A  + K+ K            + K + + ++ + F TLY
Subjt:  WLKWGDRNTRWFHQKAFDKEKQRK----SWNSPEMRKAKMKCDRISPQPFSTLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAAAAGCGAGCGCGAGCTGGATTTGTTCCTCTTGGTGTAAATGTGGATGCTGTGGAAAAAGCTCAAAAGCGGAAGGATGGGCCGTTGTTGTTCTCTCCGAGGAA
TATTGAGCGCCCCAAAGTTGACGATGGTGGACAGGCGGGGCTGCTCATTATGAAAACTTTATGTTGGAATGTGCGTGGATTGGGGAGTCCATGGGCATTCCGAAATGTGT
GTAACGAGTTGTCTTGCTTAAATCCTCATTTATGTCTTCTATCTGAGACAAAATCTTCGTCGTTCACTTTGAATAAATTAACAGCTCGTTTAAATTTTTTCTGGGTGTTT
TGGACTTGGGCTTTTCTAGGGGAGTTTTTACCTGGTGCAATCGAAGAAGCTTGGTCGGAATGGAAATTGGAGAAATGGATGGAATGGAAGTCCTTTGTTACATCAGAGAT
TGGAACAATGTGCAATTCCCTAAAAGGATGGGGTGGTAGCCAGAATAGGAGACTAAAAAATGAGATTAAGGAGATCAAGAGCAAAATTAAAGACTCTTATGATTGCCGAG
GACCTATTGATTTTGATGCAATTCATCGGTTGGGGCGGCGACTTGATAATTTGTTATTGGAGGAGGAGATGTACTGGAAACAACGATCGATGGAGAGTTGGCTTAAATGG
GGAGACCGAAATACGAGATGGTTCCATCAAAAGGCGTTTGATAAGGAAAAACAGAGGAAAAGTTGGAATTCCCCAGAAATGCGAAAGGCAAAAATGAAATGCGACCGCAT
TTCTCCTCAACCATTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCAAGCAGAACTCACTGGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATG
AGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAAAAGCGAGCGCGAGCTGGATTTGTTCCTCTTGGTGTAAATGTGGATGCTGTGGAAAAAGCTCAAAAGCGGAAGGATGGGCCGTTGTTGTTCTCTCCGAGGAA
TATTGAGCGCCCCAAAGTTGACGATGGTGGACAGGCGGGGCTGCTCATTATGAAAACTTTATGTTGGAATGTGCGTGGATTGGGGAGTCCATGGGCATTCCGAAATGTGT
GTAACGAGTTGTCTTGCTTAAATCCTCATTTATGTCTTCTATCTGAGACAAAATCTTCGTCGTTCACTTTGAATAAATTAACAGCTCGTTTAAATTTTTTCTGGGTGTTT
TGGACTTGGGCTTTTCTAGGGGAGTTTTTACCTGGTGCAATCGAAGAAGCTTGGTCGGAATGGAAATTGGAGAAATGGATGGAATGGAAGTCCTTTGTTACATCAGAGAT
TGGAACAATGTGCAATTCCCTAAAAGGATGGGGTGGTAGCCAGAATAGGAGACTAAAAAATGAGATTAAGGAGATCAAGAGCAAAATTAAAGACTCTTATGATTGCCGAG
GACCTATTGATTTTGATGCAATTCATCGGTTGGGGCGGCGACTTGATAATTTGTTATTGGAGGAGGAGATGTACTGGAAACAACGATCGATGGAGAGTTGGCTTAAATGG
GGAGACCGAAATACGAGATGGTTCCATCAAAAGGCGTTTGATAAGGAAAAACAGAGGAAAAGTTGGAATTCCCCAGAAATGCGAAAGGCAAAAATGAAATGCGACCGCAT
TTCTCCTCAACCATTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCAAGCAGAACTCACTGGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATG
AGTAG
Protein sequenceShow/hide protein sequence
MWKKRARAGFVPLGVNVDAVEKAQKRKDGPLLFSPRNIERPKVDDGGQAGLLIMKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVF
WTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKW
GDRNTRWFHQKAFDKEKQRKSWNSPEMRKAKMKCDRISPQPFSTLYKLEIRSQIQAELTGKKRVVTEPWLDANE