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Spg024219 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024219
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold4:16433854..16434969
RNA-Seq ExpressionSpg024219
SyntenySpg024219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]3.2e-2537.22Show/hide
Query:  TFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETP------------------------KSILE-------------------------
        +FK+YRS+LH+YY EFEDP  AR NPP+R+T+P +WN LCDRWETP                        KS L+                         
Subjt:  TFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETP------------------------KSILE-------------------------

Query:  ----------------MDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP-----KSSSSVSVSSSTPREKELEKKVEMMQSEM-------DAL
                        M  L+KA ++EG E V+QPE  ++ LG RP H++GLG+ P     K  SS +V+SST  EKELEKKVE M+ EM         L
Subjt:  ----------------MDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP-----KSSSSVSVSSSTPREKELEKKVEMMQSEM-------DAL

Query:  KGTQEMWEEKWAQFQQFMGEHQG
        K +   WE++W +  +FM   QG
Subjt:  KGTQEMWEEKWAQFQQFMGEHQG

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]2.1e-2436.28Show/hide
Query:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------
        NTFKEYRS+L+++Y+ F+DPK AR  PPKRITD  +WNLLC+RWETP+                                                    
Subjt:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------

Query:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------
                     + LEM  L++AS +E    +S  EV KQ LG R G+I+GLG +PK SSS SV+S    +KELEKK+E M+ EM  +K   E      
Subjt:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------

Query:  --------MWEEKWAQFQQFMGEHQG
                MWE +WA+ Q  +G  QG
Subjt:  --------MWEEKWAQFQQFMGEHQG

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]2.1e-2436.28Show/hide
Query:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------
        NTFKEYRS+L+++Y+ F+DPK AR  PPKRITD  +WNLLC+RWETP+                                                    
Subjt:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------

Query:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------
                     + LEM  L++AS +E    +S  EV KQ LG R G+I+GLG +PK SSS SV+S    +KELEKK+E M+ EM  +K   E      
Subjt:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------

Query:  --------MWEEKWAQFQQFMGEHQG
                MWE +WA+ Q  +G  QG
Subjt:  --------MWEEKWAQFQQFMGEHQG

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]1.3e-1534.72Show/hide
Query:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPKSILEMDGLLKASSK------EGSEQVSQ----------PEVMKQDLGTRPGH
        NTFKEYRS+L+++Y+ F+DPK AR  PPKRITD  +WNLLC+RWETP+   + +   K+ SK       GS+   Q           +V + DL  +   
Subjt:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPKSILEMDGLLKASSK------EGSEQVSQ----------PEVMKQDLGTRPGH

Query:  IRGLGWDPKSSSSVSVS----------------SSTPREKELEKKVEMMQSEMDALKGTQE--------------MWEEKWAQFQQFMGEHQG
            GW   ++    +                 SS   +KELEKK+E M+ EM  +K   E              MWE +WA+ Q  +G  QG
Subjt:  IRGLGWDPKSSSSVSVS----------------SSTPREKELEKKVEMMQSEMDALKGTQE--------------MWEEKWAQFQQFMGEHQG

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]2.1e-2436.28Show/hide
Query:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------
        NTFKEYRS+L+++Y+ F+DPK AR  PPKRITD  +WNLLC+RWETP+                                                    
Subjt:  NTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPK----------------------------------------------------

Query:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------
                     + LEM  L++AS +E    +S  EV KQ LG R G+I+GLG +PK SSS SV+S    +KELEKK+E M+ EM  +K   E      
Subjt:  -------------SILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKELEKKVEMMQSEMDALKGTQE------

Query:  --------MWEEKWAQFQQFMGEHQG
                MWE +WA+ Q  +G  QG
Subjt:  --------MWEEKWAQFQQFMGEHQG

TrEMBL top hitse value%identityAlignment
A0A5A7TUF4 CACTA en-spm transposon protein2.2e-1138.21Show/hide
Query:  TFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-------
        TFKE+R++ HR++K++ D + AR NPP  +     +W+ LCD + +     +M  L    + EGS+  S+ E+  Q LG RPG+ +GLGW  K       
Subjt:  TFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-------

Query:  --SSSSVSVSSSTPREKELEKKV
          S+SS S S ST +E EL+ K+
Subjt:  --SSSSVSVSSSTPREKELEKKV

A0A5A7UJF6 CACTA en-spm transposon protein7.9e-1438.93Show/hide
Query:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRW------ETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP
        + TFKE+R++ HR++K++ DPK AR NPP  +     +W+ LCD +          +  +M  L    + EGS+ +S+ E+  Q LG RPG+ +GLGW P
Subjt:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRW------ETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP

Query:  K---------SSSSVSVSSSTPREKELEKKV
        K         SSSS S S ST +E EL+ K+
Subjt:  K---------SSSSVSVSSSTPREKELEKKV

A0A5D3BPL5 CACTA en-spm transposon protein2.2e-1136.8Show/hide
Query:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-----
        + TFKE++++ H+++K++ D K AR NPP  +     +W  LCD + +     +M  L    + EGS+ +S+ E+  Q LG RP + + LGW PK     
Subjt:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-----

Query:  ----SSSSVSVSSSTPREKELEKKV
            SSSS S S ST +E EL+ K+
Subjt:  ----SSSSVSVSSSTPREKELEKKV

A0A5D3DCW2 CACTA en-spm transposon protein4.6e-1437.5Show/hide
Query:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-----
        + TFKE+ ++ HR++K++ DP+ AR NPP  +     +W+ LCD + +     +M  L    + EGS+ +S+ E+  Q LG RPG+ +GLGW PK     
Subjt:  MNTFKEYRSELHRYYKEFEDPKVARENPPKRITD-PNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPK-----

Query:  --SSSSVSVSSSTPREKELEKKVEMMQS
          S+SS S S S P EKE+E + ++ ++
Subjt:  --SSSSVSVSSSTPREKELEKKVEMMQS

A0A6J1DUH3 uncharacterized protein LOC1110232121.5e-2537.22Show/hide
Query:  TFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETP------------------------KSILE-------------------------
        +FK+YRS+LH+YY EFEDP  AR NPP+R+T+P +WN LCDRWETP                        KS L+                         
Subjt:  TFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETP------------------------KSILE-------------------------

Query:  ----------------MDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP-----KSSSSVSVSSSTPREKELEKKVEMMQSEM-------DAL
                        M  L+KA ++EG E V+QPE  ++ LG RP H++GLG+ P     K  SS +V+SST  EKELEKKVE M+ EM         L
Subjt:  ----------------MDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDP-----KSSSSVSVSSSTPREKELEKKVEMMQSEM-------DAL

Query:  KGTQEMWEEKWAQFQQFMGEHQG
        K +   WE++W +  +FM   QG
Subjt:  KGTQEMWEEKWAQFQQFMGEHQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACGTTTAAGGAGTATAGGAGCGAGTTGCATAGGTACTACAAGGAATTCGAGGACCCTAAAGTAGCTCGAGAAAATCCACCAAAAAGGATTACAGACCCAAACAA
TTGGAATTTGCTATGCGACAGGTGGGAGACTCCAAAATCGATTTTGGAAATGGACGGGCTACTGAAAGCATCATCAAAAGAAGGGTCCGAGCAGGTCTCGCAACCTGAGG
TTATGAAACAGGATTTGGGCACTCGACCAGGCCACATTAGAGGTCTTGGTTGGGATCCAAAATCTAGCTCGTCTGTCAGTGTCTCATCTTCAACCCCTCGTGAAAAGGAG
CTAGAGAAGAAAGTAGAGATGATGCAATCTGAGATGGATGCGCTCAAGGGCACGCAGGAGATGTGGGAAGAAAAGTGGGCTCAATTCCAACAATTCATGGGCGAACATCA
GGGAGGAAGTTATGGTAGCCACTTGATGCGTATACTTTGTGAACTTGTTGTTGAGTATGAT
mRNA sequenceShow/hide mRNA sequence
ATGAACACGTTTAAGGAGTATAGGAGCGAGTTGCATAGGTACTACAAGGAATTCGAGGACCCTAAAGTAGCTCGAGAAAATCCACCAAAAAGGATTACAGACCCAAACAA
TTGGAATTTGCTATGCGACAGGTGGGAGACTCCAAAATCGATTTTGGAAATGGACGGGCTACTGAAAGCATCATCAAAAGAAGGGTCCGAGCAGGTCTCGCAACCTGAGG
TTATGAAACAGGATTTGGGCACTCGACCAGGCCACATTAGAGGTCTTGGTTGGGATCCAAAATCTAGCTCGTCTGTCAGTGTCTCATCTTCAACCCCTCGTGAAAAGGAG
CTAGAGAAGAAAGTAGAGATGATGCAATCTGAGATGGATGCGCTCAAGGGCACGCAGGAGATGTGGGAAGAAAAGTGGGCTCAATTCCAACAATTCATGGGCGAACATCA
GGGAGGAAGTTATGGTAGCCACTTGATGCGTATACTTTGTGAACTTGTTGTTGAGTATGAT
Protein sequenceShow/hide protein sequence
MNTFKEYRSELHRYYKEFEDPKVARENPPKRITDPNNWNLLCDRWETPKSILEMDGLLKASSKEGSEQVSQPEVMKQDLGTRPGHIRGLGWDPKSSSSVSVSSSTPREKE
LEKKVEMMQSEMDALKGTQEMWEEKWAQFQQFMGEHQGGSYGSHLMRILCELVVEYD