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Spg024225 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024225
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:18257161..18261874
RNA-Seq ExpressionSpg024225
SyntenySpg024225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]3.3e-1327.19Show/hide
Query:  KLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTIS
        K +G ++++  E  +W   +T + +     L+  A  W  F++ +L+PT+H++T+S  R+LL  ++  S  IDVG+II  ++  C  KK   L FPN I+
Subjt:  KLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTIS

Query:  MLCKRARVLIGIID--TPNLARLQWTQEARQGGL------------VCGIHQILEQLTLSASRQEFIERQAQ---------TYWTYVKRRDVALKKALQA
         LC++ +V     D   P L+ +   +     GL              G  +   ++ L A  +   + QAQ          ++ YVK RDV ++   Q 
Subjt:  MLCKRARVLIGIID--TPNLARLQWTQEARQGGL------------VCGIHQILEQLTLSASRQEFIERQAQ---------TYWTYVKRRDVALKKALQA

Query:  NFSKPYPAFPVFPNDLL
                FP FP+++L
Subjt:  NFSKPYPAFPVFPNDLL

KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]7.3e-1346.88Show/hide
Query:  GAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV
        G+QW + K    + +  YLK  AN W+ F+    +PT+H STIS ER+LL +AI    SI+VG II  EI    +KKVG  +FP+ I+ LC RARV
Subjt:  GAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-2233.47Show/hide
Query:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR
        +E  + I+   +  L   ++ V   GA+W +S     T   + L   A  W  F++ RLLPTTH  T+S++R+LL  ++    SI+VG++I SEI  C  
Subjt:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR

Query:  KKVGKLFFPNTISMLCKRARVLI----------GIIDTPNLARL------QWTQEA-----------RQGGLVCGIHQILEQLTLSASRQEF--------
        +K G LFFP+ I+ LC+ AR             G ID   +AR+      + TQ+            R  G +    + LEQ       Q++        
Subjt:  KKVGKLFFPNTISMLCKRARVLI----------GIIDTPNLARL------QWTQEA-----------RQGGLVCGIHQILEQLTLSASRQEF--------

Query:  IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL
          +Q Q +W Y K RD ALKKALQ NF++P P FP FP ++L
Subjt:  IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.3e-2236.68Show/hide
Query:  LKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV----------LIGIIDTPNLAR
        L   A  W  F++ RLLPTTH  T+S++R+LL +++    SI+VG++I SEI  C  +K G LFFP+ I+ LC+ AR           + G ID   +AR
Subjt:  LKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV----------LIGIIDTPNLAR

Query:  L------QWTQE-----------ARQGGLVCGIHQILEQLTLSASRQEF--------IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL
        +      + TQ+           +R  G +    + LEQ       Q++          +Q Q +W Y K RD ALKKALQ NF++P P FP FP +LL
Subjt:  L------QWTQE-----------ARQGGLVCGIHQILEQLTLSASRQEF--------IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.2e-2535.81Show/hide
Query:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR
        +E  + I    E +L   ++ V   GA+W +S     T   + L   A  W  F++ RLLPTTH   +S++R+LL  ++    SI+VG++I SEI  C  
Subjt:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR

Query:  KKVGKLFFPNTISMLCKRARVLI--------GIIDTPNLARL------QWTQE--------ARQGGLVCGIHQILEQLTLSASRQEFIERQAQTYWTYVK
        +K G LFFP+ I+ LC+ A  L+        G ID   +AR+      + TQ+        A        + Q L+ L    S+QE   +Q Q +W Y K
Subjt:  KKVGKLFFPNTISMLCKRARVLI--------GIIDTPNLARL------QWTQE--------ARQGGLVCGIHQILEQLTLSASRQEFIERQAQTYWTYVK

Query:  RRDVALKKALQANFSKPYPAFPVFPNDLL
         RD ALKKALQ NF++P P FP FP ++L
Subjt:  RRDVALKKALQANFSKPYPAFPVFPNDLL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)6.4e-2333.47Show/hide
Query:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR
        +E  + I+   +  L   ++ V   GA+W +S     T   + L   A  W  F++ RLLPTTH  T+S++R+LL  ++    SI+VG++I SEI  C  
Subjt:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR

Query:  KKVGKLFFPNTISMLCKRARVLI----------GIIDTPNLARL------QWTQEA-----------RQGGLVCGIHQILEQLTLSASRQEF--------
        +K G LFFP+ I+ LC+ AR             G ID   +AR+      + TQ+            R  G +    + LEQ       Q++        
Subjt:  KKVGKLFFPNTISMLCKRARVLI----------GIIDTPNLARL------QWTQEA-----------RQGGLVCGIHQILEQLTLSASRQEF--------

Query:  IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL
          +Q Q +W Y K RD ALKKALQ NF++P P FP FP ++L
Subjt:  IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL

A0A2P5CEY2 Uncharacterized protein6.4e-2336.68Show/hide
Query:  LKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV----------LIGIIDTPNLAR
        L   A  W  F++ RLLPTTH  T+S++R+LL +++    SI+VG++I SEI  C  +K G LFFP+ I+ LC+ AR           + G ID   +AR
Subjt:  LKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARV----------LIGIIDTPNLAR

Query:  L------QWTQE-----------ARQGGLVCGIHQILEQLTLSASRQEF--------IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL
        +      + TQ+           +R  G +    + LEQ       Q++          +Q Q +W Y K RD ALKKALQ NF++P P FP FP +LL
Subjt:  L------QWTQE-----------ARQGGLVCGIHQILEQLTLSASRQEF--------IERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLL

A0A2P5CPE8 Uncharacterized protein7.9e-1341.28Show/hide
Query:  EAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNT
        E +L   ++ V I GA+W +S     T   + L   A  W  F++ RLLPTTH  T+S+ERVLL +++    SI+VG+II  EI     +K G LFFP+ 
Subjt:  EAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNT

Query:  ISMLCKRAR
        I+ +C  AR
Subjt:  ISMLCKRAR

A0A2P5DXM3 Uncharacterized protein1.1e-2535.81Show/hide
Query:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR
        +E  + I    E +L   ++ V   GA+W +S     T   + L   A  W  F++ RLLPTTH   +S++R+LL  ++    SI+VG++I SEI  C  
Subjt:  NETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWR

Query:  KKVGKLFFPNTISMLCKRARVLI--------GIIDTPNLARL------QWTQE--------ARQGGLVCGIHQILEQLTLSASRQEFIERQAQTYWTYVK
        +K G LFFP+ I+ LC+ A  L+        G ID   +AR+      + TQ+        A        + Q L+ L    S+QE   +Q Q +W Y K
Subjt:  KKVGKLFFPNTISMLCKRARVLI--------GIIDTPNLARL------QWTQE--------ARQGGLVCGIHQILEQLTLSASRQEFIERQAQTYWTYVK

Query:  RRDVALKKALQANFSKPYPAFPVFPNDLL
         RD ALKKALQ NF++P P FP FP ++L
Subjt:  RRDVALKKALQANFSKPYPAFPVFPNDLL

A0A6A3BU96 Uncharacterized protein1.6e-1327.19Show/hide
Query:  KLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTIS
        K +G ++++  E  +W   +T + +     L+  A  W  F++ +L+PT+H++T+S  R+LL  ++  S  IDVG+II  ++  C  KK   L FPN I+
Subjt:  KLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIRQRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTIS

Query:  MLCKRARVLIGIID--TPNLARLQWTQEARQGGL------------VCGIHQILEQLTLSASRQEFIERQAQ---------TYWTYVKRRDVALKKALQA
         LC++ +V     D   P L+ +   +     GL              G  +   ++ L A  +   + QAQ          ++ YVK RDV ++   Q 
Subjt:  MLCKRARVLIGIID--TPNLARLQWTQEARQGGL------------VCGIHQILEQLTLSASRQEFIERQAQ---------TYWTYVKRRDVALKKALQA

Query:  NFSKPYPAFPVFPNDLL
                FP FP+++L
Subjt:  NFSKPYPAFPVFPNDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGACGAGAGGAAGAAAAGAGAGAGAAGTTGAGGAAGAAGAAGTAGTTGTTACGCCTGAAGCCCCGAAGAAGAAGGCGAAAAAGAAAAGAAAACTTGCAGAAAG
GGAAGCCAAGTGGCTTAGAAGACTACAAGAGGCTGAAGTTTCTGAAGTACTGCAGAAGGTCATCGAGGATATTACAGAAGAGGTAGTTGCAGAGGAAGAACCGAAAGATC
CCGAAAAAGAAAAAGATCCGGAAAAAACTGTTGAAACAGAGCAAGAGATACAAGAAAAGGCAGCAAAGGATATACAAGAGCAATGTAATCATGAAAAAGAAGTGGTTCAG
GGAGAAGTAGTGCAGGAACCGCCGCGTCGCCGCCACCGCAAGCAGAAAGCGGGACGGATTAAAAGGATTCGAACATACACTCCATCTCCACCTACAACTGAATCGGAAAA
AGAGGAACCAGAGAATCAAGGGAAAGAAGAGGACGAAAAGAAGGTTGTAGAAAATGAAACTGAAAAGAAGATTCGTGAAGATAGAGAGGCAAAGTTAAATGGAGCTGTTC
AGGAAGTAGGAATAGAGGGAGCACAGTGGCGACTCTCGAAAACTGAGAAAAGGACTTTCCAGGGCGCCTACCTGAAGAAGGAAGCAAATACGTGGATGGGATTTATCAGG
CAGAGGTTGCTTCCAACAACTCATGACTCCACAATCTCTCGGGAAAGAGTTCTTTTGTCTTTTGCAATTAAAAGGTCTCTTAGCATCGATGTGGGTAAGATTATTGCCAG
TGAAATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCAAATACAATCTCAATGCTCTGTAAGAGAGCGAGGGTTCTGATAGGAATAATTGACACACCAA
ACTTGGCACGGCTTCAATGGACGCAAGAAGCACGTCAAGGAGGGCTAGTCTGTGGCATTCACCAAATCTTAGAACAACTCACACTTTCAGCCAGCAGGCAAGAGTTCATC
GAGAGGCAAGCTCAAACCTATTGGACTTATGTTAAAAGACGTGATGTTGCATTAAAGAAAGCACTGCAAGCAAACTTTTCCAAGCCTTATCCAGCCTTTCCTGTATTCCC
GAATGATTTGTTGAACCCTTGGATCCCACCTCCACCCATTGAGAGAGTAGAGGAAGATGATGATGCTGGTCAGGAGGACGAGATGAAGAAAATTACCGAGCGAGCATTTG
TTTTCACACTGAGCATTCCTAACTTAACATTTTCTTCTGAATTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGGTGTTCTGATCTTCAGAAACCTTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGACGAGAGGAAGAAAAGAGAGAGAAGTTGAGGAAGAAGAAGTAGTTGTTACGCCTGAAGCCCCGAAGAAGAAGGCGAAAAAGAAAAGAAAACTTGCAGAAAG
GGAAGCCAAGTGGCTTAGAAGACTACAAGAGGCTGAAGTTTCTGAAGTACTGCAGAAGGTCATCGAGGATATTACAGAAGAGGTAGTTGCAGAGGAAGAACCGAAAGATC
CCGAAAAAGAAAAAGATCCGGAAAAAACTGTTGAAACAGAGCAAGAGATACAAGAAAAGGCAGCAAAGGATATACAAGAGCAATGTAATCATGAAAAAGAAGTGGTTCAG
GGAGAAGTAGTGCAGGAACCGCCGCGTCGCCGCCACCGCAAGCAGAAAGCGGGACGGATTAAAAGGATTCGAACATACACTCCATCTCCACCTACAACTGAATCGGAAAA
AGAGGAACCAGAGAATCAAGGGAAAGAAGAGGACGAAAAGAAGGTTGTAGAAAATGAAACTGAAAAGAAGATTCGTGAAGATAGAGAGGCAAAGTTAAATGGAGCTGTTC
AGGAAGTAGGAATAGAGGGAGCACAGTGGCGACTCTCGAAAACTGAGAAAAGGACTTTCCAGGGCGCCTACCTGAAGAAGGAAGCAAATACGTGGATGGGATTTATCAGG
CAGAGGTTGCTTCCAACAACTCATGACTCCACAATCTCTCGGGAAAGAGTTCTTTTGTCTTTTGCAATTAAAAGGTCTCTTAGCATCGATGTGGGTAAGATTATTGCCAG
TGAAATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCAAATACAATCTCAATGCTCTGTAAGAGAGCGAGGGTTCTGATAGGAATAATTGACACACCAA
ACTTGGCACGGCTTCAATGGACGCAAGAAGCACGTCAAGGAGGGCTAGTCTGTGGCATTCACCAAATCTTAGAACAACTCACACTTTCAGCCAGCAGGCAAGAGTTCATC
GAGAGGCAAGCTCAAACCTATTGGACTTATGTTAAAAGACGTGATGTTGCATTAAAGAAAGCACTGCAAGCAAACTTTTCCAAGCCTTATCCAGCCTTTCCTGTATTCCC
GAATGATTTGTTGAACCCTTGGATCCCACCTCCACCCATTGAGAGAGTAGAGGAAGATGATGATGCTGGTCAGGAGGACGAGATGAAGAAAATTACCGAGCGAGCATTTG
TTTTCACACTGAGCATTCCTAACTTAACATTTTCTTCTGAATTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGGTGTTCTGATCTTCAGAAACCTTTTGCTTGA
Protein sequenceShow/hide protein sequence
MAKTRGRKEREVEEEEVVVTPEAPKKKAKKKRKLAEREAKWLRRLQEAEVSEVLQKVIEDITEEVVAEEEPKDPEKEKDPEKTVETEQEIQEKAAKDIQEQCNHEKEVVQ
GEVVQEPPRRRHRKQKAGRIKRIRTYTPSPPTTESEKEEPENQGKEEDEKKVVENETEKKIREDREAKLNGAVQEVGIEGAQWRLSKTEKRTFQGAYLKKEANTWMGFIR
QRLLPTTHDSTISRERVLLSFAIKRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTISMLCKRARVLIGIIDTPNLARLQWTQEARQGGLVCGIHQILEQLTLSASRQEFI
ERQAQTYWTYVKRRDVALKKALQANFSKPYPAFPVFPNDLLNPWIPPPPIERVEEDDDAGQEDEMKKITERAFVFTLSIPNLTFSSEFLKLGLVSLIRSRCSDLQKPFA