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Spg024237 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024237
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pro-like protein
Genome locationscaffold4:18208525..18213695
RNA-Seq ExpressionSpg024237
SyntenySpg024237
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]7.4e-0935.25Show/hide
Query:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP
        ++P   GR    YKP+  D   +QE+++K+R  +LE RE      +IP LY+TFK + +          D L+ +M  LS+ A+ +E      + VY CP
Subjt:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP

Query:  PGFELCNWESTELPIHFEEAQE
        P FEL NW+S +LP    + Q+
Subjt:  PGFELCNWESTELPIHFEEAQE

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]6.7e-1036.89Show/hide
Query:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP
        ++P   GR    YKP+  D   +QEE++K+R A+LE RE      +IP LY+TFK + +          D L+ +M  LS+ A++ +      + VY CP
Subjt:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP

Query:  PGFELCNWESTELPIHFEEAQE
        P FEL NW+S +LP    + QE
Subjt:  PGFELCNWESTELPIHFEEAQE

KAA0055607.1 Gag-pro-like protein [Cucumis melo var. makuwa]9.7e-0937.27Show/hide
Query:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE
        YKP+  D   +QEE++K+R A+LE RE       IP LY+ FK + +          D L+ +M  LS+ A+ ++      + VY CPP FEL NW+S +
Subjt:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE

Query:  LPIHFEEAQE
        LP    + QE
Subjt:  LPIHFEEAQE

KAA0063218.1 Gag-pro-like protein [Cucumis melo var. makuwa]9.7e-0937.27Show/hide
Query:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE
        YKP+  D   +QEE +K+R A+LE R+       IP LY+TFK +++          D L+ +M  L + A+ +E      ++VY CPP FEL NW+  +
Subjt:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE

Query:  LPIHFEEAQE
        LP    E QE
Subjt:  LPIHFEEAQE

XP_022157707.1 uncharacterized protein LOC111024360 [Momordica charantia]8.8e-1035.86Show/hide
Query:  MSEQSNDQNQELRQDVESLKEQMSKILEIITTEKGKPMAETPELEDVA---------PPGFTPSVSQHSGASATSVQPIFYTHAPQMPPLGGRASYKPTA
        M+EQ N +NQEL QD E LKEQM+KIL+++  +KGK + E P   DV           PGFTP V  H+G +    QPIFYT  P M   G  A    T 
Subjt:  MSEQSNDQNQELRQDVESLKEQMSKILEIITTEKGKPMAETPELEDVA---------PPGFTPSVSQHSGASATSVQPIFYTHAPQMPPLGGRASYKPTA

Query:  VDWKNVQE--EERKQRSARLENREVSTKRMIIPHLYETFKKSKVE
        +  + V    ++RK  +  + N E+     +     +   K K++
Subjt:  VDWKNVQE--EERKQRSARLENREVSTKRMIIPHLYETFKKSKVE

TrEMBL top hitse value%identityAlignment
A0A5A7T0R1 Uncharacterized protein4.7e-0929.82Show/hide
Query:  GCCVFNLISKKRRIDQGF---LQKDFIPSMSEQSNDQNQELRQDVES-LKEQMSKILEIITTEKGKPMAETPELEDVAPPGFTPSVSQHSGASATSVQPI
        G C+FN++ +   I   +   L + +I S     +  +Q+L+  V S L   M +   +IT     P  E  E           S      A AT ++  
Subjt:  GCCVFNLISKKRRIDQGF---LQKDFIPSMSEQSNDQNQELRQDVES-LKEQMSKILEIITTEKGKPMAETPELEDVAPPGFTPSVSQHSGASATSVQPI

Query:  FYTHAPQMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDS
              ++P   GR    YKP+  D   +QE+++K+R A+LE RE      +IP LY+TFK + +          D L+ +M  LS+ A+ +E      +
Subjt:  FYTHAPQMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDS

Query:  LVYKCPPGFELCNWESTELPIHFEEAQE
         VY CPP FEL NW+S +LP    + QE
Subjt:  LVYKCPPGFELCNWESTELPIHFEEAQE

A0A5A7T5W2 Retrotrans_gag domain-containing protein3.2e-1036.89Show/hide
Query:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP
        ++P   GR    YKP+  D   +QEE++K+R A+LE RE      +IP LY+TFK + +          D L+ +M  LS+ A++ +      + VY CP
Subjt:  QMPPLGGR--ASYKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCP

Query:  PGFELCNWESTELPIHFEEAQE
        P FEL NW+S +LP    + QE
Subjt:  PGFELCNWESTELPIHFEEAQE

A0A5A7UM01 Gag-pro-like protein4.7e-0937.27Show/hide
Query:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE
        YKP+  D   +QEE++K+R A+LE RE       IP LY+ FK + +          D L+ +M  LS+ A+ ++      + VY CPP FEL NW+S +
Subjt:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE

Query:  LPIHFEEAQE
        LP    + QE
Subjt:  LPIHFEEAQE

A0A5A7V6I2 Gag-pro-like protein4.7e-0937.27Show/hide
Query:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE
        YKP+  D   +QEE +K+R A+LE R+       IP LY+TFK +++          D L+ +M  L + A+ +E      ++VY CPP FEL NW+  +
Subjt:  YKPTAVDWKNVQEEERKQRSARLENREVSTKRMIIPHLYETFKKSKVE--------ADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTE

Query:  LPIHFEEAQE
        LP    E QE
Subjt:  LPIHFEEAQE

A0A6J1DV70 uncharacterized protein LOC1110243604.2e-1035.86Show/hide
Query:  MSEQSNDQNQELRQDVESLKEQMSKILEIITTEKGKPMAETPELEDVA---------PPGFTPSVSQHSGASATSVQPIFYTHAPQMPPLGGRASYKPTA
        M+EQ N +NQEL QD E LKEQM+KIL+++  +KGK + E P   DV           PGFTP V  H+G +    QPIFYT  P M   G  A    T 
Subjt:  MSEQSNDQNQELRQDVESLKEQMSKILEIITTEKGKPMAETPELEDVA---------PPGFTPSVSQHSGASATSVQPIFYTHAPQMPPLGGRASYKPTA

Query:  VDWKNVQE--EERKQRSARLENREVSTKRMIIPHLYETFKKSKVE
        +  + V    ++RK  +  + N E+     +     +   K K++
Subjt:  VDWKNVQE--EERKQRSARLENREVSTKRMIIPHLYETFKKSKVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCGCCTGGGGTAAGGTTCGAGCTTGATCCAGAAATTGAGAGGACATTCAGGAGAAGAAGGAGAGAGCAACGTAGAAACCAAAATCCAATGGCTGATGTGCT
GCGTCTCCTGCAGGCTCCAGAAGATCCAGTAGACCCCCAGCAGAATCGTGTGCTGCAGCCAAATCCACCACTAGAGCAAAATGGACAACAAAAGAGTCAGGCAGAGAATC
CTATCTTGGAACCCAACATGTTCGCACAAGAAGGTTGCTGCGTTTTCAATCTTATTAGTAAGAAAAGGCGAATCGATCAAGGCTTTCTACAAAAGGATTTTATCCCTTCA
ATGAGTGAGCAAAGTAATGACCAGAACCAAGAATTGAGACAGGATGTAGAATCTCTGAAAGAGCAAATGTCAAAAATCCTGGAGATCATTACTACGGAAAAGGGGAAACC
TATGGCTGAAACTCCTGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCGGTATCTCAGCATAGCGGGGCATCGGCTACATCTGTACAACCGATCTTCTATACTC
ATGCACCTCAAATGCCTCCATTAGGAGGAAGGGCAAGTTATAAGCCAACTGCTGTGGACTGGAAGAATGTCCAAGAAGAAGAAAGAAAGCAGAGGAGTGCCAGATTAGAA
AATCGAGAAGTAAGTACTAAGAGAATGATCATACCCCATCTCTATGAGACTTTCAAGAAGAGCAAAGTCGAAGCAGACAAGTTAGTATTAGAGATGTCAGATTTATCCAT
CACCGCCATCATTGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAACTGGGAATCCACAGAATTGCCTATTCATTTTG
AAGAAGCCCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCGCCTGGGGTAAGGTTCGAGCTTGATCCAGAAATTGAGAGGACATTCAGGAGAAGAAGGAGAGAGCAACGTAGAAACCAAAATCCAATGGCTGATGTGCT
GCGTCTCCTGCAGGCTCCAGAAGATCCAGTAGACCCCCAGCAGAATCGTGTGCTGCAGCCAAATCCACCACTAGAGCAAAATGGACAACAAAAGAGTCAGGCAGAGAATC
CTATCTTGGAACCCAACATGTTCGCACAAGAAGGTTGCTGCGTTTTCAATCTTATTAGTAAGAAAAGGCGAATCGATCAAGGCTTTCTACAAAAGGATTTTATCCCTTCA
ATGAGTGAGCAAAGTAATGACCAGAACCAAGAATTGAGACAGGATGTAGAATCTCTGAAAGAGCAAATGTCAAAAATCCTGGAGATCATTACTACGGAAAAGGGGAAACC
TATGGCTGAAACTCCTGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCGGTATCTCAGCATAGCGGGGCATCGGCTACATCTGTACAACCGATCTTCTATACTC
ATGCACCTCAAATGCCTCCATTAGGAGGAAGGGCAAGTTATAAGCCAACTGCTGTGGACTGGAAGAATGTCCAAGAAGAAGAAAGAAAGCAGAGGAGTGCCAGATTAGAA
AATCGAGAAGTAAGTACTAAGAGAATGATCATACCCCATCTCTATGAGACTTTCAAGAAGAGCAAAGTCGAAGCAGACAAGTTAGTATTAGAGATGTCAGATTTATCCAT
CACCGCCATCATTGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAACTGGGAATCCACAGAATTGCCTATTCATTTTG
AAGAAGCCCAAGAGTAA
Protein sequenceShow/hide protein sequence
MSDPPGVRFELDPEIERTFRRRRREQRRNQNPMADVLRLLQAPEDPVDPQQNRVLQPNPPLEQNGQQKSQAENPILEPNMFAQEGCCVFNLISKKRRIDQGFLQKDFIPS
MSEQSNDQNQELRQDVESLKEQMSKILEIITTEKGKPMAETPELEDVAPPGFTPSVSQHSGASATSVQPIFYTHAPQMPPLGGRASYKPTAVDWKNVQEEERKQRSARLE
NREVSTKRMIIPHLYETFKKSKVEADKLVLEMSDLSITAIIEEHVESVDSLVYKCPPGFELCNWESTELPIHFEEAQE