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Spg024249 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024249
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:19702216..19707809
RNA-Seq ExpressionSpg024249
SyntenySpg024249
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-1736.31Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +   L   +  V + GA+W +S     T   + L      W  F+K  LLPTTH   VS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.3e-1736.2Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +   L   +  V   GA+W +S     T   + L      W  F+K RLLPTTH   VS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]4.1e-1633.16Show/hide
Query:  MLKRDFLFERGFGDDLPHFLLGLPTTDGINWSPGAINSLFNLQDF--PHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTW
        +L R+F       DD   ++ G+     +  S  AIN+++ L D    H+++ E + EP   +L   +  V I GA+W +S     T   + L      W
Subjt:  MLKRDFLFERGFGDDLPHFLLGLPTTDGINWSPGAINSLFNLQDF--PHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTW

Query:  LGFIKLRLLPTTHNFIVSRDIVLLVFAILRSLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
          F+K RLLPTTH  IVS++ VLL++++L   SI++G++I  EI     +K G LFFP+ I  +C  A  P   ++  L + G ID   +AR+
Subjt:  LGFIKLRLLPTTHNFIVSRDIVLLVFAILRSLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]3.7e-1737.04Show/hide
Query:  SPGAINSLFNLQD--FPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILRS
        S  AIN+++ L D    H+++ E + EP   +L   +  V I GA+W +S     T   + L      W  F+K RLLPTTH   VS++ VLL++++L  
Subjt:  SPGAINSLFNLQD--FPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILRS

Query:  LSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
         SI+VG++I  EI  Y  +K G LFFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  LSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]8.3e-1737.5Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +  +L   +  V   GA+W +S     T   + L      W  F+K RLLPTTH  IVS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1736.31Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +   L   +  V + GA+W +S     T   + L      W  F+K  LLPTTH   VS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)4.0e-1736.2Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +   L   +  V   GA+W +S     T   + L      W  F+K RLLPTTH   VS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

A0A2P5BNT0 Uncharacterized protein (Fragment)2.0e-1633.16Show/hide
Query:  MLKRDFLFERGFGDDLPHFLLGLPTTDGINWSPGAINSLFNLQDF--PHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTW
        +L R+F       DD   ++ G+     +  S  AIN+++ L D    H+++ E + EP   +L   +  V I GA+W +S     T   + L      W
Subjt:  MLKRDFLFERGFGDDLPHFLLGLPTTDGINWSPGAINSLFNLQDF--PHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTW

Query:  LGFIKLRLLPTTHNFIVSRDIVLLVFAILRSLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
          F+K RLLPTTH  IVS++ VLL++++L   SI++G++I  EI     +K G LFFP+ I  +C  A  P   ++  L + G ID   +AR+
Subjt:  LGFIKLRLLPTTHNFIVSRDIVLLVFAILRSLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

A0A2P5CPE8 Uncharacterized protein1.8e-1737.04Show/hide
Query:  SPGAINSLFNLQD--FPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILRS
        S  AIN+++ L D    H+++ E + EP   +L   +  V I GA+W +S     T   + L      W  F+K RLLPTTH   VS++ VLL++++L  
Subjt:  SPGAINSLFNLQD--FPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILRS

Query:  LSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL
         SI+VG++I  EI  Y  +K G LFFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  LSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARL

A0A2P5DXM3 Uncharacterized protein4.0e-1737.5Show/hide
Query:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR
        ++WS  AIN++F L D P  +++E +   +  +L   +  V   GA+W +S     T   + L      W  F+K RLLPTTH  IVS+D +LL+ ++L 
Subjt:  INWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGAQWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILR

Query:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE
          SI+VG++I +EI     +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  SLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIIDTPNLARLQRTQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGGAAGAAGGGAAAGAGATATTGAGGAAGAAGAGGTGCCAGAAGTTCAGGAAAAGCGAGCAAAAGACGTGCTGGAACAAGGGAACGGTCAAGGAGC
CCAAGAGCAACAGGTTCAGGCAGAGGTTGTGCCGGAACCACCGCGTCGCCGCTGCCGTAATAAAAAGGCGAGACATATCAGAGTGGTTAGGGTGGACACTTCATCTCCGT
CAACAACAGAATTTGAGAATGAGAATACAAAAAAAGAGGATCAAGAGAAAGAGAAAACTGAAAAGAAGGCTGAAGAAGAGGCCCTGACGAAGCAACAAGAAGACAAGGGC
AAAAGAGTTGCTGAAGCAACAATTGAAGCAGAGGAGGATGAAGTTGAGGAGCCAAGGATACCGTATGCACCCTTCATCAACGATATTGCCCGAGCAAAGTATCTAGAAAT
GCTGAAGAGGGACTTCTTGTTTGAAAGGGGATTTGGTGATGACCTGCCACATTTCTTGTTGGGATTACCAACCACGGATGGGATCAACTGGAGCCCAGGGGCAATTAACT
CTCTTTTTAATCTTCAGGATTTTCCACACGCCGACTACAATGAGATGGTGGTAGAACCATCTAATGATCAACTAAACGCTGCTGTAAGAGAAGTTGGAATTGAAGGGGCT
CAGTGGAGGTTGTCAAAGACTAAGAAGCGCACATTTCAAGTAGCCTATTTGAAGAGTGAAACCAACACCTGGTTAGGATTCATCAAATTGCGTCTTCTACCGACAACCCA
CAACTTTATAGTTTCCCGCGACATAGTGCTCCTGGTTTTTGCGATCCTAAGGTCCCTAAGTATTGATGTTGGTAAAGTTATTTCCAATGAAATCTTCAACTACTGGCGTA
AAAAGGTGGGCAAATTATTCTTCCCAAATACGATCACTGTGTTGTGTAATAGGGCAGGGGTGCCTAAAACTCCAGACGATGTCATTCTGTTTGACAAGGGGATTATTGAC
ACACCCAACCTAGCGAGGCTTCAACGGACCCAAGAACTTCGACAAGGGGGCTGGCTTAAATGGCTTTTATTGAGAATGCTTGAGATGGCTGATGATTATGTGCTTGAATT
TTCTTATGTTGTGCACTTTAGGGAAGATGGTCCTCGTCGAAGCTTTGGAAGCGATTCGGGGCTTAAACGAGCGAAACAGGAACGTAAAATGACTTTTCTGCCCTTGGAGC
CATCAAAGCGTGGAGACAATGTCATCCTAGCGTCGGGACGTTGTTCAAATAAGGAAAAGACTTGGGCGTCAAGATCAAGTAACAGCGTCGAGACG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGGAAGAAGGGAAAGAGATATTGAGGAAGAAGAGGTGCCAGAAGTTCAGGAAAAGCGAGCAAAAGACGTGCTGGAACAAGGGAACGGTCAAGGAGC
CCAAGAGCAACAGGTTCAGGCAGAGGTTGTGCCGGAACCACCGCGTCGCCGCTGCCGTAATAAAAAGGCGAGACATATCAGAGTGGTTAGGGTGGACACTTCATCTCCGT
CAACAACAGAATTTGAGAATGAGAATACAAAAAAAGAGGATCAAGAGAAAGAGAAAACTGAAAAGAAGGCTGAAGAAGAGGCCCTGACGAAGCAACAAGAAGACAAGGGC
AAAAGAGTTGCTGAAGCAACAATTGAAGCAGAGGAGGATGAAGTTGAGGAGCCAAGGATACCGTATGCACCCTTCATCAACGATATTGCCCGAGCAAAGTATCTAGAAAT
GCTGAAGAGGGACTTCTTGTTTGAAAGGGGATTTGGTGATGACCTGCCACATTTCTTGTTGGGATTACCAACCACGGATGGGATCAACTGGAGCCCAGGGGCAATTAACT
CTCTTTTTAATCTTCAGGATTTTCCACACGCCGACTACAATGAGATGGTGGTAGAACCATCTAATGATCAACTAAACGCTGCTGTAAGAGAAGTTGGAATTGAAGGGGCT
CAGTGGAGGTTGTCAAAGACTAAGAAGCGCACATTTCAAGTAGCCTATTTGAAGAGTGAAACCAACACCTGGTTAGGATTCATCAAATTGCGTCTTCTACCGACAACCCA
CAACTTTATAGTTTCCCGCGACATAGTGCTCCTGGTTTTTGCGATCCTAAGGTCCCTAAGTATTGATGTTGGTAAAGTTATTTCCAATGAAATCTTCAACTACTGGCGTA
AAAAGGTGGGCAAATTATTCTTCCCAAATACGATCACTGTGTTGTGTAATAGGGCAGGGGTGCCTAAAACTCCAGACGATGTCATTCTGTTTGACAAGGGGATTATTGAC
ACACCCAACCTAGCGAGGCTTCAACGGACCCAAGAACTTCGACAAGGGGGCTGGCTTAAATGGCTTTTATTGAGAATGCTTGAGATGGCTGATGATTATGTGCTTGAATT
TTCTTATGTTGTGCACTTTAGGGAAGATGGTCCTCGTCGAAGCTTTGGAAGCGATTCGGGGCTTAAACGAGCGAAACAGGAACGTAAAATGACTTTTCTGCCCTTGGAGC
CATCAAAGCGTGGAGACAATGTCATCCTAGCGTCGGGACGTTGTTCAAATAAGGAAAAGACTTGGGCGTCAAGATCAAGTAACAGCGTCGAGACG
Protein sequenceShow/hide protein sequence
MAKTRGRRERDIEEEEVPEVQEKRAKDVLEQGNGQGAQEQQVQAEVVPEPPRRRCRNKKARHIRVVRVDTSSPSTTEFENENTKKEDQEKEKTEKKAEEEALTKQQEDKG
KRVAEATIEAEEDEVEEPRIPYAPFINDIARAKYLEMLKRDFLFERGFGDDLPHFLLGLPTTDGINWSPGAINSLFNLQDFPHADYNEMVVEPSNDQLNAAVREVGIEGA
QWRLSKTKKRTFQVAYLKSETNTWLGFIKLRLLPTTHNFIVSRDIVLLVFAILRSLSIDVGKVISNEIFNYWRKKVGKLFFPNTITVLCNRAGVPKTPDDVILFDKGIID
TPNLARLQRTQELRQGGWLKWLLLRMLEMADDYVLEFSYVVHFREDGPRRSFGSDSGLKRAKQERKMTFLPLEPSKRGDNVILASGRCSNKEKTWASRSSNSVET