; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024250 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024250
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold4:16598714..16603636
RNA-Seq ExpressionSpg024250
SyntenySpg024250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059654.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.4e-3627.27Show/hide
Query:  GVFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKY
        GVF+VASLMA G I+SL VPVL NIYHGLG I  AS   G     FP+HYVH WLA+YF THY +     GP +  FSG+G + +F ++EAR  IH G  
Subjt:  GVFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKY

Query:  VSWYASLQARNIGELLKD----------------------------------------------------------------------DGK-LSASQFPE
        + W+A+LQ RN  E + D                                                                      DG+ LSA   P+
Subjt:  VSWYASLQARNIGELLKD----------------------------------------------------------------------DGK-LSASQFPE

Query:  LPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCHLVTN------------------------EIPK---QMKTTTHAAA
        +P PLSPLND    LIE +     S   P+  DS    VG  K  +++ V QS  L  +                          PK   Q  ++THA  
Subjt:  LPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCHLVTN------------------------EIPK---QMKTTTHAAA

Query:  S-----------------EVSNYGADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQS
                          E S +  + V++N+ +  AL +                                     L  L+E +++Y K+V+ +N +QS
Subjt:  S-----------------EVSNYGADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQS

Query:  SFASQLTSE----------------------------------------KEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEASKLRGTISSIEDAPV
        S+++QL S                                         ++ELE RL ++ A+  ++S L  EK + + Q +LE +KL+  ++++E  P 
Subjt:  SFASQLTSE----------------------------------------KEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEASKLRGTISSIEDAPV

Query:  LTDADAKTLTILHGKLEDAQEELKNYKW
        +T+   + L ++   +E AQEE KN+KW
Subjt:  LTDADAKTLTILHGKLEDAQEELKNYKW

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]1.2e-3867.77Show/hide
Query:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV
        VFKVASLMAEG  FSL +P+LANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+YK      GP MVEFSGEGGAKY+ + EAR HIH  KYV
Subjt:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV

Query:  SWYASLQARNIGELLKDDGKL
        SW+A LQA+N  ELL DDG L
Subjt:  SWYASLQARNIGELLKDDGKL

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]2.0e-3868.91Show/hide
Query:  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSW
        KVASLMAEG  FSL +PVLANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+YK      GP MVEFSGEGGAKY+ + EAR HIHK KYVSW
Subjt:  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSW

Query:  YASLQARNIGELLKDDGKL
        +A LQA+N  ELL DDG L
Subjt:  YASLQARNIGELLKDDGKL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.0e-4271.07Show/hide
Query:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV
        VFKVASLMAEGY FSL VPVLANIY GL Q+H+++ S G+S ACFPLHYVH WLA YFNTHYK      GP MVEFSGEGGAKY+ + EAR HIHKGKYV
Subjt:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV

Query:  SWYASLQARNIGELLKDDGKL
        SW+A L  +N  ELL DDG+L
Subjt:  SWYASLQARNIGELLKDDGKL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.6e-1127.57Show/hide
Query:  GNFKASLDRVVTQSCHLVTNEIPKQMKTTTHAAASEVSNYGADNVISNYREHAALAI-------------------------------------LGPLKE
        GN K  +   +  +C  V    P++++ T     SE+S++ AD++IS+ R  AA+ +                                     L  L+E
Subjt:  GNFKASLDRVVTQSCHLVTNEIPKQMKTTTHAAASEVSNYGADNVISNYREHAALAI-------------------------------------LGPLKE

Query:  IVSAYFKKVEKYNQLQSSFASQ-------------------------------------LTSEKEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEAS
        +V+ YF+ VE +NQ+ SSF  Q                                     L++++ +LEA+L+ V+A+  ++S +I + +  LKQ Q E S
Subjt:  IVSAYFKKVEKYNQLQSSFASQ-------------------------------------LTSEKEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEAS

Query:  KLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKWT
        K    I  +E AP++ D DAK L+ L   LE   EELKN+KWT
Subjt:  KLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKWT

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]8.8e-3929.24Show/hide
Query:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV
        VF+VASLMA G I+SL VPVLANIYHGLG I  AS   G     FP+HYVH WLA+YF THY +     GP M  FSGEGG+ YF ++EAR  IH G  +
Subjt:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV

Query:  SWYASLQARNIGE--------------------------LLKDDGK-----------------------------------------------------L
         W+A+LQ RN  E                          LLK+ G                                                      L
Subjt:  SWYASLQARNIGE--------------------------LLKDDGK-----------------------------------------------------L

Query:  SASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY
        SA + P++P PLSPLND    LIE E     S   P+  DS    VG  K  +++   QS     +  EI +          ++ ++   A  + S   +
Subjt:  SASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY

Query:  GADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQSSFASQL--TSEKEELEARLEAVK
          + V+SN+ +  AL +                                     L  L+E +++Y K+V+ +N +QSS+++QL  T +  +L  +  A+K
Subjt:  GADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQSSFASQL--TSEKEELEARLEAVK

Query:  AKRCEISKL-----IVEKEDLLKQHQLEASKLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKW
             + +L     ++++   + Q +LE +KL   ++++E    +T+   + L  +   +EDA+EE KN+KW
Subjt:  AKRCEISKL-----IVEKEDLLKQHQLEASKLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKW

TrEMBL top hitse value%identityAlignment
A0A5A7TJC9 Reverse transcriptase6.4e-3560.77Show/hide
Query:  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEAR
        VFKVA         SLMAEGY FSL VP+LANIY GL QIH+++ S G S ACFPLHYVH WL  YFNTHYK      G  M+EF GEGGA Y+ +  A 
Subjt:  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEAR

Query:  LHIHKGKYVSWYASLQARNIGELLKDDGKL
         HI+KGKYVSW+  LQ +N  ELLKDDG L
Subjt:  LHIHKGKYVSWYASLQARNIGELLKDDGKL

A0A5A7U349 PMD domain-containing protein4.3e-3929.24Show/hide
Query:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV
        VF+VASLMA G I+SL VPVLANIYHGLG I  AS   G     FP+HYVH WLA+YF THY +     GP M  FSGEGG+ YF ++EAR  IH G  +
Subjt:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV

Query:  SWYASLQARNIGE--------------------------LLKDDGK-----------------------------------------------------L
         W+A+LQ RN  E                          LLK+ G                                                      L
Subjt:  SWYASLQARNIGE--------------------------LLKDDGK-----------------------------------------------------L

Query:  SASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY
        SA + P++P PLSPLND    LIE E     S   P+  DS    VG  K  +++   QS     +  EI +          ++ ++   A  + S   +
Subjt:  SASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY

Query:  GADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQSSFASQL--TSEKEELEARLEAVK
          + V+SN+ +  AL +                                     L  L+E +++Y K+V+ +N +QSS+++QL  T +  +L  +  A+K
Subjt:  GADNVISNYREHAALAI-------------------------------------LGPLKEIVSAYFKKVEKYNQLQSSFASQL--TSEKEELEARLEAVK

Query:  AKRCEISKL-----IVEKEDLLKQHQLEASKLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKW
             + +L     ++++   + Q +LE +KL   ++++E    +T+   + L  +   +EDA+EE KN+KW
Subjt:  AKRCEISKL-----IVEKEDLLKQHQLEASKLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKW

A0A5A7V0Y4 Uncharacterized protein5.6e-3967.77Show/hide
Query:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV
        VFKVASLMAEG  FSL +P+LANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+YK      GP MVEFSGEGGAKY+ + EAR HIH  KYV
Subjt:  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYV

Query:  SWYASLQARNIGELLKDDGKL
        SW+A LQA+N  ELL DDG L
Subjt:  SWYASLQARNIGELLKDDGKL

A0A5D3C9B7 Uncharacterized protein9.5e-3968.91Show/hide
Query:  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSW
        KVASLMAEG  FSL +PVLANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+YK      GP MVEFSGEGGAKY+ + EAR HIHK KYVSW
Subjt:  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSW

Query:  YASLQARNIGELLKDDGKL
        +A LQA+N  ELL DDG L
Subjt:  YASLQARNIGELLKDDGKL

A0A5D3D3U4 Reverse transcriptase6.4e-3560.77Show/hide
Query:  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEAR
        VFKVA         SLMAEGY FSL VP+LANIY GL QIH+++ S G S ACFPLHYVH WL  YFNTHYK      G  M+EF GEGGA Y+ +  A 
Subjt:  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEAR

Query:  LHIHKGKYVSWYASLQARNIGELLKDDGKL
         HI+KGKYVSW+  LQ +N  ELLKDDG L
Subjt:  LHIHKGKYVSWYASLQARNIGELLKDDGKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAAATGCTTGGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGCGTTATTCTTCTTGTAGGAAAGGCAAT
ATGTGGAGTTTTTAAAGTCGCCAGTCTTATGGCTGAAGGTTACATTTTTAGTCTTGATGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCACAATGCAT
CTCCCTCGGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCATTATGTCCATGCTTGGTTGGCTTATTACTTTAACACGCATTATAAAGTTTCAGCACCTTTCACTGGCCCG
GTGATGGTTGAATTTTCTGGCGAGGGTGGGGCTAAGTACTTTGACGATTTTGAAGCCCGTTTACATATTCACAAAGGTAAATATGTGTCATGGTATGCAAGTCTTCAAGC
TAGAAATATAGGTGAGCTTTTGAAGGATGACGGGAAATTGTCCGCATCACAATTTCCTGAACTCCCTGCACCACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGG
GGCATCATAGTCCTTCTTTTGTGAGTCCATACGTTTTTGATTCTGTAGCTGCACGTGTGGGCAATTTCAAAGCATCGCTGGATAGAGTTGTGACTCAATCTTGTCATCTT
GTAACTAATGAGATTCCTAAACAAATGAAGACAACAACACATGCAGCTGCGTCTGAGGTCTCTAATTATGGTGCTGACAATGTGATTTCCAACTATAGGGAACATGCTGC
CCTTGCCATCTTGGGCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAAGTAGAGAAGTATAACCAACTGCAGTCGTCGTTTGCTTCTCAATTAACTTCGGAGAAAG
AAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGATGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAA
CTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACGATACTTCATGGAAAGTTGGAAGATGCACAAGAAGAGCTGAA
GAACTACAAGTGGACGTCGTTATCAGATTTCATTTTTTTTATATCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAAATGCTTGGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGCGTTATTCTTCTTGTAGGAAAGGCAAT
ATGTGGAGTTTTTAAAGTCGCCAGTCTTATGGCTGAAGGTTACATTTTTAGTCTTGATGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCACAATGCAT
CTCCCTCGGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCATTATGTCCATGCTTGGTTGGCTTATTACTTTAACACGCATTATAAAGTTTCAGCACCTTTCACTGGCCCG
GTGATGGTTGAATTTTCTGGCGAGGGTGGGGCTAAGTACTTTGACGATTTTGAAGCCCGTTTACATATTCACAAAGGTAAATATGTGTCATGGTATGCAAGTCTTCAAGC
TAGAAATATAGGTGAGCTTTTGAAGGATGACGGGAAATTGTCCGCATCACAATTTCCTGAACTCCCTGCACCACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGG
GGCATCATAGTCCTTCTTTTGTGAGTCCATACGTTTTTGATTCTGTAGCTGCACGTGTGGGCAATTTCAAAGCATCGCTGGATAGAGTTGTGACTCAATCTTGTCATCTT
GTAACTAATGAGATTCCTAAACAAATGAAGACAACAACACATGCAGCTGCGTCTGAGGTCTCTAATTATGGTGCTGACAATGTGATTTCCAACTATAGGGAACATGCTGC
CCTTGCCATCTTGGGCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAAGTAGAGAAGTATAACCAACTGCAGTCGTCGTTTGCTTCTCAATTAACTTCGGAGAAAG
AAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGATGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAA
CTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACGATACTTCATGGAAAGTTGGAAGATGCACAAGAAGAGCTGAA
GAACTACAAGTGGACGTCGTTATCAGATTTCATTTTTTTTATATCATTGTAG
Protein sequenceShow/hide protein sequence
MVYFTEHPDPEKKCLVILKDRDQPVENGVILLVGKAICGVFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGP
VMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGKLSASQFPELPAPLSPLNDPLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCHL
VTNEIPKQMKTTTHAAASEVSNYGADNVISNYREHAALAILGPLKEIVSAYFKKVEKYNQLQSSFASQLTSEKEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEASK
LRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKWTSLSDFIFFISL