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Spg024280 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024280
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGTP-binding protein SAR1
Genome locationscaffold4:20910839..20913953
RNA-Seq ExpressionSpg024280
SyntenySpg024280
Gene Ontology termsGO:0003400 - regulation of COPII vesicle coating (biological process)
GO:0070863 - positive regulation of protein exit from endoplasmic reticulum (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0030127 - COPII vesicle coat (cellular component)
GO:0070971 - endoplasmic reticulum exit site (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006687 - Small GTPase superfamily, SAR1-type
IPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB24406.1 hypothetical protein B456_004G144100 [Gossypium raimondii]1.4e-3573.15Show/hide
Query:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF
        F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGF
Subjt:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF

Query:  KWLSQYIK
        KW+SQYIK
Subjt:  KWLSQYIK

MBA0583939.1 hypothetical protein [Gossypium raimondii]1.4e-3573.15Show/hide
Query:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF
        F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGF
Subjt:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF

Query:  KWLSQYIK
        KW+SQYIK
Subjt:  KWLSQYIK

XP_042988256.1 GTP-binding protein SAR1B [Carya illinoinensis]1.4e-3574.77Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKVSLA+ NVRPLEVFMCSIVRKMGYGDGFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

XP_042992771.1 GTP-binding protein SAR1A isoform X1 [Carya illinoinensis]1.4e-3574.77Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+EALADV FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

XP_042992772.1 GTP-binding protein SAR1A isoform X2 [Carya illinoinensis]1.4e-3574.77Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+EALADV FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

TrEMBL top hitse value%identityAlignment
A0A061DRC2 Secretion-associated RAS super family 2 isoform 11.2e-3573.15Show/hide
Query:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF
        F VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGF
Subjt:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF

Query:  KWLSQYIK
        KW+SQYIK
Subjt:  KWLSQYIK

A0A0D2R4Q5 Uncharacterized protein6.8e-3673.15Show/hide
Query:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF
        F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGF
Subjt:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF

Query:  KWLSQYIK
        KW+SQYIK
Subjt:  KWLSQYIK

A0A2P6R7I2 Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase1.2e-3573.83Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+EALA V FLILGN IDIP       +  HL  N   TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        W+SQYIK
Subjt:  WLSQYIK

A0A6A2XSJ5 GTP-binding protein SAR1B1.2e-3570.91Show/hide
Query:  SAFEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGD
        S F+VD  VYLVD YDKERFAESKK++DALLS+E+LA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGD
Subjt:  SAFEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGD

Query:  GFKWLSQYIK
        GFKW+SQYIK
Subjt:  GFKWLSQYIK

A0A7J8P3W6 Uncharacterized protein6.8e-3673.15Show/hide
Query:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF
        F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGF
Subjt:  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGF

Query:  KWLSQYIK
        KW+SQYIK
Subjt:  KWLSQYIK

SwissProt top hitse value%identityAlignment
O04266 GTP-binding protein SAR1A2.9e-3671.03Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL  +   TGKGKV L   NVRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

O04267 GTP-binding protein SAR1B2.6e-3266.67Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLA--NLNVRPLEVFMCSIVRKMGYGDG
        +VD  VYLVD YDKERF+ESKK+LDALLS++ALA V FLILGN ID P       +  HL      TGKGKV+ A  +  VRPLEVFMCSIVRKMGYG+G
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLA--NLNVRPLEVFMCSIVRKMGYGDG

Query:  FKWLSQYI
        FKWLSQYI
Subjt:  FKWLSQYI

O04834 GTP-binding protein SAR1A2.9e-3670.09Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL  +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        W+SQYIK
Subjt:  WLSQYIK

P52884 GTP-binding protein SAR21.5e-3262.62Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD  D+ERF E+KK+LD LLS+E+L +V FLILGN IDIP       +  HL    + TGKG ++LA  NVRP+EVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        W+SQYIK
Subjt:  WLSQYIK

Q01474 GTP-binding protein SAR1B4.2e-3569.81Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESK++LDALLS+EALA V FLILGN IDIP       +  HL      TGKGKV+L +  VRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYI
        WLSQYI
Subjt:  WLSQYI

Arabidopsis top hitse value%identityAlignment
AT1G02620.1 Ras-related small GTP-binding family protein3.5e-3770.09Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YD+ERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL  +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

AT1G09180.1 secretion-associated RAS super family 14.1e-3364.49Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YD++RF ESK++LDALLS+EALA+V  LILGN IDIP       +  +L      TGKG V+L +  VRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        WLSQYIK
Subjt:  WLSQYIK

AT1G56330.1 secretion-associated RAS 1B3.0e-3669.81Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESK++LDALLS+EALA V FLILGN IDIP       +  HL      TGKGKV+L +  VRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYI
        WLSQYI
Subjt:  WLSQYI

AT3G62560.1 Ras-related small GTP-binding family protein2.7e-3770.75Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+E+LA+V FLILGN IDIP       +  HL      TGKGKV+LA  NVRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYI
        W+SQYI
Subjt:  WLSQYI

AT4G02080.1 secretion-associated RAS super family 22.1e-3770.09Show/hide
Query:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK
        +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL  +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFK
Subjt:  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFK

Query:  WLSQYIK
        W+SQYIK
Subjt:  WLSQYIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCTCCAGCATCAGACAACTTGAAAATCTTTGCTCGTTCCGTCAGTCGCATCTTCTTCTTGTTCGAAGCTCTTTGTCGTGTCGATTTTCAGTCCTCACATCGTAG
TCGCAGCTTTGCTCGTGCTTGCTCAGCCTTCGAAGTGGATGTCGCAGTTTATCTGGTGGACCCATATGACAAGGAGAGATTTGCAGAGTCCAAAAAACAGTTGGACGCAC
TCCTCTCCAATGAAGCATTAGCTGATGTTTCATTTCTGATTCTGGGTAATATGATTGACATTCCAATATGCTGCATCAGAAGACGAGTTACGGTACATCTTAGGTCTAAC
AAACTTCACACAGGCAAGGGCAAGGTAAGCCTAGCTAACTTGAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTTAGGAAAATGGGTTATGGGGATGGTTTCAA
ATGGCTTTCTCAGTACATTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCTCCAGCATCAGACAACTTGAAAATCTTTGCTCGTTCCGTCAGTCGCATCTTCTTCTTGTTCGAAGCTCTTTGTCGTGTCGATTTTCAGTCCTCACATCGTAG
TCGCAGCTTTGCTCGTGCTTGCTCAGCCTTCGAAGTGGATGTCGCAGTTTATCTGGTGGACCCATATGACAAGGAGAGATTTGCAGAGTCCAAAAAACAGTTGGACGCAC
TCCTCTCCAATGAAGCATTAGCTGATGTTTCATTTCTGATTCTGGGTAATATGATTGACATTCCAATATGCTGCATCAGAAGACGAGTTACGGTACATCTTAGGTCTAAC
AAACTTCACACAGGCAAGGGCAAGGTAAGCCTAGCTAACTTGAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTTAGGAAAATGGGTTATGGGGATGGTTTCAA
ATGGCTTTCTCAGTACATTAAGTAG
Protein sequenceShow/hide protein sequence
MSAPASDNLKIFARSVSRIFFLFEALCRVDFQSSHRSRSFARACSAFEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSN
KLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK