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Spg024291 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024291
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncytochrome b5
Genome locationscaffold4:20360090..20363033
RNA-Seq ExpressionSpg024291
SyntenySpg024291
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593603.1 Cycloartenol synthase, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3981.37Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTS+LPDHPGG ELL+LAVEKDATFDFKSVGHSE AQE MKK++IGKIDP TLP +Q++VETTPH+PTPSL SFSP+HVLIP+LLL LAFAFPY+K+
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

XP_004140502.1 cytochrome b5 [Cucumis sativus]1.3e-4085.29Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELA EKMK ++IGKID STLP KQ+YVE+ P+Q TPSLFSFSP+H+L+P+LLLALAFAFPYFKL
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

XP_008459741.1 PREDICTED: cytochrome b5 [Cucumis melo]9.7e-4490.2Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMK +RIGKID STLP+KQ YVE+TP+QPTPSLFSFSP+HVL+P+LLLALAFAFPYFKL
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

XP_022964486.1 cytochrome b5-like [Cucurbita moschata]9.4e-3980.39Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTS+LPDHPGG ELL+LAVEKDATFDFKSVGHSE A+E+MKK++IGKIDP TLP +Q++VETTPH+PTPSL SFSP+HVLIP+LLL LAFAFPY K+
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

XP_038875836.1 cytochrome b5-like [Benincasa hispida]2.2e-4389.22Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVT+FLPDHPGG+ELLLLAV +DATFDFKSVGHSELAQEKMKK+RIGKID STLPRKQ+YVETTP+QPTPSLFSFSP+H+LIP+LLLALAFAFPYFKL
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

TrEMBL top hitse value%identityAlignment
A0A0A0KA20 Cytochrome b5 heme-binding domain-containing protein6.4e-4185.29Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELA EKMK ++IGKID STLP KQ+YVE+ P+Q TPSLFSFSP+H+L+P+LLLALAFAFPYFKL
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

A0A1S3CAE5 cytochrome b54.7e-4490.2Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMK +RIGKID STLP+KQ YVE+TP+QPTPSLFSFSP+HVL+P+LLLALAFAFPYFKL
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

A0A6J1HJ10 cytochrome b5-like4.6e-3980.39Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTS+LPDHPGG ELL+LAVEKDATFDFKSVGHSE A+E+MKK++IGKIDP TLP +Q++VETTPH+PTPSL SFSP+HVLIP+LLL LAFAFPY K+
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

A0A6J1KHQ2 cytochrome b5-like2.3e-3879.41Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL
        VYDVTS+LPDHPGG ELL+L VEKDATFDFKSVGHSE A+E MKK++IGKIDP TLP +Q+YVETTP++PTPSL SFSP+HVLIP+LLL LAFAFPY K+
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKL

Query:  KA
        KA
Subjt:  KA

M5X125 Cytochrome b5 heme-binding domain-containing protein1.4e-1953.85Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEY---VETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPY
        VYDVT FL DHPGGDE+LLLAVEKDAT DF  VGHS+ A+E+M+KF +GK+D ST+P +  Y    +TTP     S F    +  L+P+L+L  AFA  Y
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEY---VETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPY

Query:  FKLK
        +  K
Subjt:  FKLK

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B8.1e-1748.45Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALA
        VY+VT FL DHPGGD++LL +  KDAT DF+ VGHSE A+E M+++ +G+IDP+T+P+K +Y  T P QP       S F    +  L+P+ +L LA
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALA

P40934 Cytochrome b56.8e-1646.73Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA
        VYDVT F+ DHPGGDE+LL +  KDAT DF+ VGHS+ A++ M+K+ IG+ID ST+P  + YV   P QP      TP  F    +  L+P+L+L LA  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA

Query:  FPYFKLK
           +  K
Subjt:  FPYFKLK

P49098 Cytochrome b51.2e-1544.66Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALAFAF
        VYDVT FL DHPGGDE+LL A  KDAT DF+ VGHS  A+  + ++ +G ID +T+P K +Y  T P+QP       S F    +  L+P+++L +AF  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALAFAF

Query:  PYF
         ++
Subjt:  PYF

Q42342 Cytochrome b5 isoform E1.2e-1545.79Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA
        VYDVT F+ DHPGGDE+LL +  KDAT DF+ VGHS+ A++ M K+ IG+ID S++P  + YV   P QP      TP  F    +  L+P+L+L LA  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA

Query:  FPYFKLK
          ++  K
Subjt:  FPYFKLK

Q9ZWT2 Cytochrome B5 isoform D2.0e-1544.44Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETT-----PHQPTPSLFSFSPVHVLIPMLLLALAFAF
        VYDVT FL DHPGGDE++L +  KDAT DF+ VGHS  A+  + ++ +G ID +T+P K ++V  T       Q   S F    +  L+P+L+L LAF  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETT-----PHQPTPSLFSFSPVHVLIPMLLLALAFAF

Query:  PYF-KLKA
         Y+ K KA
Subjt:  PYF-KLKA

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A3.8e-1439.18Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQE---YVETTPHQPTPSLFSFSPVHVLIPMLLLALAFA
        VYDV+S++ +HPGGD++LL    KDAT DF+  GHS+ A+E M+K+ IG++D S+LP   E   Y +  P      LF  +  + ++P+ ++ ++ A
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQE---YVETTPHQPTPSLFSFSPVHVLIPMLLLALAFA

AT2G32720.1 cytochrome B5 isoform B5.7e-1848.45Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALA
        VY+VT FL DHPGGD++LL +  KDAT DF+ VGHSE A+E M+++ +G+IDP+T+P+K +Y  T P QP       S F    +  L+P+ +L LA
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP-----TPSLFSFSPVHVLIPMLLLALA

AT2G46650.1 cytochrome B5 isoform C4.1e-1641.51Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYV-----ETTPHQPTPSLFSFSPVHVLIPMLLLALAFAF
        VYD+++F+ +HPGGD +LL    KDA+ DF+ V HS+ A+E MKK+ IG +D ST+P  Q+Y+     E+T  + T        +  LIP+L+L +AFA 
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYV-----ETTPHQPTPSLFSFSPVHVLIPMLLLALAFAF

Query:  PYFKLK
         ++  K
Subjt:  PYFKLK

AT5G48810.1 cytochrome B5 isoform D1.4e-1644.44Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETT-----PHQPTPSLFSFSPVHVLIPMLLLALAFAF
        VYDVT FL DHPGGDE++L +  KDAT DF+ VGHS  A+  + ++ +G ID +T+P K ++V  T       Q   S F    +  L+P+L+L LAF  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETT-----PHQPTPSLFSFSPVHVLIPMLLLALAFAF

Query:  PYF-KLKA
         Y+ K KA
Subjt:  PYF-KLKA

AT5G53560.1 cytochrome B5 isoform E8.3e-1745.79Show/hide
Query:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA
        VYDVT F+ DHPGGDE+LL +  KDAT DF+ VGHS+ A++ M K+ IG+ID S++P  + YV   P QP      TP  F    +  L+P+L+L LA  
Subjt:  VYDVTSFLPDHPGGDELLLLAVEKDATFDFKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQP------TPSLFSFSPVHVLIPMLLLALAFA

Query:  FPYFKLK
          ++  K
Subjt:  FPYFKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTCTCTTCTTCTCTTCACTCTCTCCACCTTCGACCCTGCCATTAAAATGAACTTCACTCCTCCACGAAGGCTCCTCTCCCAGAAATTGACGTCGATTGAAGT
CTGTACGCCGTCGGACAGACTCCGCGGCCATGCTTCGCCGGAGCTCGCACTCATTTCCACCCGCAGAGATCGGTATCAGTGGCTGAGGCGAAGCGTGGCGGCGCTGAGAT
CGAAAGAAGAAAGTTTTCTATCAGTGTACGATGTGACTTCTTTTTTGCCGGACCATCCAGGAGGAGATGAGCTTTTACTACTTGCAGTTGAAAAAGATGCAACATTTGAT
TTCAAGAGCGTTGGACACAGTGAGTTAGCTCAAGAGAAGATGAAAAAGTTTCGGATTGGAAAGATCGACCCATCGACTCTTCCAAGAAAACAAGAATATGTCGAAACTAC
CCCACACCAACCAACTCCAAGTCTCTTTTCCTTTTCACCCGTGCATGTTCTAATCCCTATGTTGCTCTTAGCCTTGGCTTTTGCTTTTCCCTATTTTAAACTCAAGGCCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTTCTCTTCTTCTCTTCACTCTCTCCACCTTCGACCCTGCCATTAAAATGAACTTCACTCCTCCACGAAGGCTCCTCTCCCAGAAATTGACGTCGATTGAAGT
CTGTACGCCGTCGGACAGACTCCGCGGCCATGCTTCGCCGGAGCTCGCACTCATTTCCACCCGCAGAGATCGGTATCAGTGGCTGAGGCGAAGCGTGGCGGCGCTGAGAT
CGAAAGAAGAAAGTTTTCTATCAGTGTACGATGTGACTTCTTTTTTGCCGGACCATCCAGGAGGAGATGAGCTTTTACTACTTGCAGTTGAAAAAGATGCAACATTTGAT
TTCAAGAGCGTTGGACACAGTGAGTTAGCTCAAGAGAAGATGAAAAAGTTTCGGATTGGAAAGATCGACCCATCGACTCTTCCAAGAAAACAAGAATATGTCGAAACTAC
CCCACACCAACCAACTCCAAGTCTCTTTTCCTTTTCACCCGTGCATGTTCTAATCCCTATGTTGCTCTTAGCCTTGGCTTTTGCTTTTCCCTATTTTAAACTCAAGGCCT
AA
Protein sequenceShow/hide protein sequence
MFVSLLLFTLSTFDPAIKMNFTPPRRLLSQKLTSIEVCTPSDRLRGHASPELALISTRRDRYQWLRRSVAALRSKEESFLSVYDVTSFLPDHPGGDELLLLAVEKDATFD
FKSVGHSELAQEKMKKFRIGKIDPSTLPRKQEYVETTPHQPTPSLFSFSPVHVLIPMLLLALAFAFPYFKLKA