; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024295 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024295
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold4:22544946..22546645
RNA-Seq ExpressionSpg024295
SyntenySpg024295
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]8.0e-1930.27Show/hide
Query:  RFINELARAKYMEML-KRDFLFERGFGEDLLH---------FLRAGIANHGWSQFCAKP-DPLNSNIVRELYAN--------------------------
        +F++  A  +Y E +  R+ + E+GF   LLH         F+   I + GW  FC  P DP+   +V+E YAN                          
Subjt:  RFINELARAKYMEML-KRDFLFERGFGEDLLH---------FLRAGIANHGWSQFCAKP-DPLNSNIVRELYAN--------------------------

Query:  --IDDQEGFQVMMVVAPSNDQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISN
          I +Q+   V ++     +QL   ++ I I GAQW LS K   T     L+  A  W  F+  RLL +TH  T+SR+R +L++A+L    I+VG++I +
Subjt:  --IDDQEGFQVMMVVAPSNDQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISN

Query:  EIYNCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGL-VCGIHNILEQLALSASRQEYAER
        +I  C  K  G L+FP+ I+ LC ++ V  EA +  L   G  +++    +S+ R E +E+
Subjt:  EIYNCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGL-VCGIHNILEQLALSASRQEYAER

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.8e-2131.68Show/hide
Query:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----
        V+F  E A  +Y   ++ R    E+GF  D       L F+   I  H W QFCA P+     +VRE YAN+ D     V    + V+ S + +NA    
Subjt:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----

Query:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                              +  + + GA+W +S +   T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI 
Subjt:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGLVCGIHNI--LEQLALSASRQEYAERQTQ
         C  +  G LFFP+ IT LC  A  P    +  L    HN   ++ +A++   QE     TQ
Subjt:  NCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGLVCGIHNI--LEQLALSASRQEYAERQTQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.2e-2830.14Show/hide
Query:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----
        V+F  E A  +Y   ++ R    E+GF  D       L F+   I  H W QFCA P+     +VRE YAN+ D E   V    + V+ S + +NA    
Subjt:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----

Query:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                              +  +   GA+W +S +   T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI 
Subjt:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRA---------------------------EVPTEA---------------RQCGLVCGIHNILEQLALSASRQEY----
         C  +  G LFFP+ IT LC  A                           E PTE+               R  G +      LEQ       Q+Y    
Subjt:  NCWHKMVGKLFFPNTITMLCSRA---------------------------EVPTEA---------------RQCGLVCGIHNILEQLALSASRQEY----

Query:  ----AERQTQTYWTYAKRRDATLRRALQSNFSKTYQAFPMFPDDL
              +Q Q +W Y+K RD  L++ALQ+NF++    FP FP ++
Subjt:  ----AERQTQTYWTYAKRRDATLRRALQSNFSKTYQAFPMFPDDL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.8e-1830.09Show/hide
Query:  VRFINELARAKYME-------MLKRDFLFERGFGEDLLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANI---DDQ----EGFQVMMVVAPSN-----
        V+F ++ A  +Y E        ++++F+++     +   F+   I  H W  FCA P+     +VRE Y N+   DD      G QV + V   N     
Subjt:  VRFINELARAKYME-------MLKRDFLFERGFGEDLLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANI---DDQ----EGFQVMMVVAPSN-----

Query:  ----------------DQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                         +L   +  + I GA+W +S +   T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ----------------DQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRAEVP
         C  +  G LFFP+ IT +C     P
Subjt:  NCWHKMVGKLFFPNTITMLCSRAEVP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.3e-2133.02Show/hide
Query:  QLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWHKMVGKLFFPNTIT
        +L   +  +   GA+W +S +   T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I +EI  C  +  G LFFP+ IT
Subjt:  QLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWHKMVGKLFFPNTIT

Query:  MLCSRA-------------------------EVPTEARQ---------CGLVCGIHNILEQLAL---SASRQEYAERQTQTYWTYAKRRDATLRRALQSN
         LC  A                         E PTE+ Q                 ++L+QL       S+QE+  +Q Q +W Y+K RD  L++ALQ+N
Subjt:  MLCSRA-------------------------EVPTEARQ---------CGLVCGIHNILEQLAL---SASRQEYAERQTQTYWTYAKRRDATLRRALQSN

Query:  FSKTYQAFPMFPDDL
        F++    FP FP ++
Subjt:  FSKTYQAFPMFPDDL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.8e-2131.68Show/hide
Query:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----
        V+F  E A  +Y   ++ R    E+GF  D       L F+   I  H W QFCA P+     +VRE YAN+ D     V    + V+ S + +NA    
Subjt:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----

Query:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                              +  + + GA+W +S +   T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI 
Subjt:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGLVCGIHNI--LEQLALSASRQEYAERQTQ
         C  +  G LFFP+ IT LC  A  P    +  L    HN   ++ +A++   QE     TQ
Subjt:  NCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGLVCGIHNI--LEQLALSASRQEYAERQTQ

A0A2P5BCG4 Uncharacterized protein (Fragment)3.5e-2830.14Show/hide
Query:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----
        V+F  E A  +Y   ++ R    E+GF  D       L F+   I  H W QFCA P+     +VRE YAN+ D E   V    + V+ S + +NA    
Subjt:  VRFINELARAKYMEMLK-RDFLFERGFGED------LLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVM---MVVAPSNDQLNA----

Query:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                              +  +   GA+W +S +   T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI 
Subjt:  ---------------------AVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRA---------------------------EVPTEA---------------RQCGLVCGIHNILEQLALSASRQEY----
         C  +  G LFFP+ IT LC  A                           E PTE+               R  G +      LEQ       Q+Y    
Subjt:  NCWHKMVGKLFFPNTITMLCSRA---------------------------EVPTEA---------------RQCGLVCGIHNILEQLALSASRQEY----

Query:  ----AERQTQTYWTYAKRRDATLRRALQSNFSKTYQAFPMFPDDL
              +Q Q +W Y+K RD  L++ALQ+NF++    FP FP ++
Subjt:  ----AERQTQTYWTYAKRRDATLRRALQSNFSKTYQAFPMFPDDL

A0A2P5DAQ2 Uncharacterized protein8.6e-1930.09Show/hide
Query:  VRFINELARAKYME-------MLKRDFLFERGFGEDLLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANI---DDQ----EGFQVMMVVAPSN-----
        V+F ++ A  +Y E        ++++F+++     +   F+   I  H W  FCA P+     +VRE Y N+   DD      G QV + V   N     
Subjt:  VRFINELARAKYME-------MLKRDFLFERGFGEDLLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANI---DDQ----EGFQVMMVVAPSN-----

Query:  ----------------DQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY
                         +L   +  + I GA+W +S +   T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ----------------DQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIY

Query:  NCWHKMVGKLFFPNTITMLCSRAEVP
         C  +  G LFFP+ IT +C     P
Subjt:  NCWHKMVGKLFFPNTITMLCSRAEVP

A0A2P5DXM3 Uncharacterized protein6.4e-2233.02Show/hide
Query:  QLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWHKMVGKLFFPNTIT
        +L   +  +   GA+W +S +   T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I +EI  C  +  G LFFP+ IT
Subjt:  QLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWHKMVGKLFFPNTIT

Query:  MLCSRA-------------------------EVPTEARQ---------CGLVCGIHNILEQLAL---SASRQEYAERQTQTYWTYAKRRDATLRRALQSN
         LC  A                         E PTE+ Q                 ++L+QL       S+QE+  +Q Q +W Y+K RD  L++ALQ+N
Subjt:  MLCSRA-------------------------EVPTEARQ---------CGLVCGIHNILEQLAL---SASRQEYAERQTQTYWTYAKRRDATLRRALQSN

Query:  FSKTYQAFPMFPDDL
        F++    FP FP ++
Subjt:  FSKTYQAFPMFPDDL

W9RBS1 Uncharacterized protein3.9e-1930.27Show/hide
Query:  RFINELARAKYMEML-KRDFLFERGFGEDLLH---------FLRAGIANHGWSQFCAKP-DPLNSNIVRELYAN--------------------------
        +F++  A  +Y E +  R+ + E+GF   LLH         F+   I + GW  FC  P DP+   +V+E YAN                          
Subjt:  RFINELARAKYMEML-KRDFLFERGFGEDLLH---------FLRAGIANHGWSQFCAKP-DPLNSNIVRELYAN--------------------------

Query:  --IDDQEGFQVMMVVAPSNDQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISN
          I +Q+   V ++     +QL   ++ I I GAQW LS K   T     L+  A  W  F+  RLL +TH  T+SR+R +L++A+L    I+VG++I +
Subjt:  --IDDQEGFQVMMVVAPSNDQLNAAVREIGIEGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISN

Query:  EIYNCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGL-VCGIHNILEQLALSASRQEYAER
        +I  C  K  G L+FP+ I+ LC ++ V  EA +  L   G  +++    +S+ R E +E+
Subjt:  EIYNCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGL-VCGIHNILEQLALSASRQEYAER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGATTATTCGGTTAGGATTTTATTTGCTGAAGCCCCATTTAAACCCCACTCAGTGGAACACGTTGCTGATGTTGTGGTTGAGGAAGAAAATCCAAAGGAACC
TGAGGAACAAGATCCTGAACAGAGTGAGCCGGTGGTTGAGAATCCGCAAGAAGTTCAAGAGAAGCAGGCGGAAGATGTGCAAGAAAAAGGTAATGGACAGGAAGTTCAAG
AGCAGGAGGTTCAGGCTGAAGTCATTGTACCAGAGATTCCACATCGCCGCCGTCGGAAGCAAAAGGCTGGGAGGGTCAAGGCAAAGGAAGAGATTTTAGCGAAGCATCAA
GAAGACAAGGGCAAGGGAGTTGCAGAAGAGGAAGAAGTAGGAATGTCGTTTGTTCGCTTCATAAATGAACTTGCTAGAGCAAAATACATGGAGATGCTAAAAAGGGATTT
CTTATTCGAGAGAGGTTTCGGTGAAGATCTACTGCATTTCTTGAGGGCCGGGATTGCGAATCATGGCTGGAGTCAATTCTGTGCAAAGCCAGATCCATTAAATTCGAATA
TTGTTCGTGAATTGTACGCGAATATTGATGATCAGGAAGGATTCCAAGTTATGATGGTGGTGGCACCATCTAACGATCAACTGAATGCGGCTGTTAGGGAGATTGGCATT
GAAGGGGCCCAATGGAGGTTGTCGAAGAAGGAGAAGCGCACATTCCAAGCGGCTTATCTAAAGAGTGAGGCCAACACATGGTTGAGCTTCATTAAGCTGCGCCTACTTCC
GACAACCCACGACTCAACAGTATCACGGGACAGGGTGCTTCTGGTATTTGCTATTCTACGGTCTTTAAGTATTGATGTTGGAAAAATTATTTCGAATGAAATCTACAATT
GCTGGCACAAGATGGTGGGAAAGCTGTTTTTCCCAAACACGATCACGATGTTATGCAGCAGGGCAGAAGTGCCCACGGAAGCACGCCAATGTGGGCTGGTTTGCGGCATT
CATAACATTTTAGAGCAACTGGCACTGTCCGCCAGTAGGCAAGAGTATGCTGAAAGGCAGACACAAACCTACTGGACCTATGCTAAAAGGAGGGATGCCACACTGAGGAG
GGCCTTACAATCGAATTTTTCGAAAACATATCAGGCCTTCCCTATGTTCCCCGATGATCTATTTAACCCTTGGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGATTATTCGGTTAGGATTTTATTTGCTGAAGCCCCATTTAAACCCCACTCAGTGGAACACGTTGCTGATGTTGTGGTTGAGGAAGAAAATCCAAAGGAACC
TGAGGAACAAGATCCTGAACAGAGTGAGCCGGTGGTTGAGAATCCGCAAGAAGTTCAAGAGAAGCAGGCGGAAGATGTGCAAGAAAAAGGTAATGGACAGGAAGTTCAAG
AGCAGGAGGTTCAGGCTGAAGTCATTGTACCAGAGATTCCACATCGCCGCCGTCGGAAGCAAAAGGCTGGGAGGGTCAAGGCAAAGGAAGAGATTTTAGCGAAGCATCAA
GAAGACAAGGGCAAGGGAGTTGCAGAAGAGGAAGAAGTAGGAATGTCGTTTGTTCGCTTCATAAATGAACTTGCTAGAGCAAAATACATGGAGATGCTAAAAAGGGATTT
CTTATTCGAGAGAGGTTTCGGTGAAGATCTACTGCATTTCTTGAGGGCCGGGATTGCGAATCATGGCTGGAGTCAATTCTGTGCAAAGCCAGATCCATTAAATTCGAATA
TTGTTCGTGAATTGTACGCGAATATTGATGATCAGGAAGGATTCCAAGTTATGATGGTGGTGGCACCATCTAACGATCAACTGAATGCGGCTGTTAGGGAGATTGGCATT
GAAGGGGCCCAATGGAGGTTGTCGAAGAAGGAGAAGCGCACATTCCAAGCGGCTTATCTAAAGAGTGAGGCCAACACATGGTTGAGCTTCATTAAGCTGCGCCTACTTCC
GACAACCCACGACTCAACAGTATCACGGGACAGGGTGCTTCTGGTATTTGCTATTCTACGGTCTTTAAGTATTGATGTTGGAAAAATTATTTCGAATGAAATCTACAATT
GCTGGCACAAGATGGTGGGAAAGCTGTTTTTCCCAAACACGATCACGATGTTATGCAGCAGGGCAGAAGTGCCCACGGAAGCACGCCAATGTGGGCTGGTTTGCGGCATT
CATAACATTTTAGAGCAACTGGCACTGTCCGCCAGTAGGCAAGAGTATGCTGAAAGGCAGACACAAACCTACTGGACCTATGCTAAAAGGAGGGATGCCACACTGAGGAG
GGCCTTACAATCGAATTTTTCGAAAACATATCAGGCCTTCCCTATGTTCCCCGATGATCTATTTAACCCTTGGATATGA
Protein sequenceShow/hide protein sequence
MEEDYSVRILFAEAPFKPHSVEHVADVVVEEENPKEPEEQDPEQSEPVVENPQEVQEKQAEDVQEKGNGQEVQEQEVQAEVIVPEIPHRRRRKQKAGRVKAKEEILAKHQ
EDKGKGVAEEEEVGMSFVRFINELARAKYMEMLKRDFLFERGFGEDLLHFLRAGIANHGWSQFCAKPDPLNSNIVRELYANIDDQEGFQVMMVVAPSNDQLNAAVREIGI
EGAQWRLSKKEKRTFQAAYLKSEANTWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWHKMVGKLFFPNTITMLCSRAEVPTEARQCGLVCGI
HNILEQLALSASRQEYAERQTQTYWTYAKRRDATLRRALQSNFSKTYQAFPMFPDDLFNPWI