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Spg024338 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024338
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEF-hand domain-containing protein
Genome locationscaffold4:19333069..19337703
RNA-Seq ExpressionSpg024338
SyntenySpg024338
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039753.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa]7.0e-2968.94Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++DSK K R SMN R VKDV EYEK+R+SRI ENKKRMEALGL KLATSF +S+ N +K D+KGKRKLGE   AADEDY+P
Subjt:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G+DSSS+ED DDSEE D +FG+GK   SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

XP_004140495.1 uncharacterized protein LOC101206207 [Cucumis sativus]5.2e-3272.73Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSKKP-RGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++ SKK  RGSMNGR+VKDV EYEK+R+SRIAENKKRMEALGLAK+ATSF +S+ N +K D KGKRKLGE   AAD+DYKP
Subjt:  MSNRDLSDYE-SEENPNSSSSDSKKP-RGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G DSSS+ED DDSEEGD DFG+GKV  SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

XP_016902477.1 PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo]7.0e-2968.94Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++DSK K R SMN R VKDV EYEK+R+SRI ENKKRMEALGL KLATSF +S+ N +K D+KGKRKLGE   AADEDY+P
Subjt:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G+DSSS+ED DDSEE D +FG+GK   SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

XP_022159279.1 uncharacterized protein LOC111025692 isoform X1 [Momordica charantia]6.3e-3068.42Show/hide
Query:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE
        MS+RDL+D E  E P+S SSDS++   S+NG+DV  V+EYEK+RLSRIAENKKRMEALGLA LA +   SA NS+ IDKKGKRKLGED+D ADEDYKPGE
Subjt:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE

Query:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK
        DSSSAED D     EEGD DFG+GKV  S  MK
Subjt:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK

XP_022159280.1 uncharacterized protein LOC111025692 isoform X2 [Momordica charantia]6.3e-3068.42Show/hide
Query:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE
        MS+RDL+D E  E P+S SSDS++   S+NG+DV  V+EYEK+RLSRIAENKKRMEALGLA LA +   SA NS+ IDKKGKRKLGED+D ADEDYKPGE
Subjt:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE

Query:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK
        DSSSAED D     EEGD DFG+GKV  S  MK
Subjt:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK

TrEMBL top hitse value%identityAlignment
A0A0A0KDV1 EF-hand domain-containing protein2.5e-3272.73Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSKKP-RGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++ SKK  RGSMNGR+VKDV EYEK+R+SRIAENKKRMEALGLAK+ATSF +S+ N +K D KGKRKLGE   AAD+DYKP
Subjt:  MSNRDLSDYE-SEENPNSSSSDSKKP-RGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G DSSS+ED DDSEEGD DFG+GKV  SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

A0A1S4E2M5 uncharacterized protein LOC1034990703.4e-2968.94Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++DSK K R SMN R VKDV EYEK+R+SRI ENKKRMEALGL KLATSF +S+ N +K D+KGKRKLGE   AADEDY+P
Subjt:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G+DSSS+ED DDSEE D +FG+GK   SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

A0A5D3DMC4 EF_hand_5 domain-containing protein3.4e-2968.94Show/hide
Query:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP
        MSNRDL+D E  EE PNSS++DSK K R SMN R VKDV EYEK+R+SRI ENKKRMEALGL KLATSF +S+ N +K D+KGKRKLGE   AADEDY+P
Subjt:  MSNRDLSDYE-SEENPNSSSSDSK-KPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP

Query:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK
        G+DSSS+ED DDSEE D +FG+GK   SR  K
Subjt:  GEDSSSAED-DDSEEGDGDFGTGKVFESRRMK

A0A6J1DY88 uncharacterized protein LOC111025692 isoform X23.1e-3068.42Show/hide
Query:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE
        MS+RDL+D E  E P+S SSDS++   S+NG+DV  V+EYEK+RLSRIAENKKRMEALGLA LA +   SA NS+ IDKKGKRKLGED+D ADEDYKPGE
Subjt:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE

Query:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK
        DSSSAED D     EEGD DFG+GKV  S  MK
Subjt:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK

A0A6J1E1Z5 uncharacterized protein LOC111025692 isoform X13.1e-3068.42Show/hide
Query:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE
        MS+RDL+D E  E P+S SSDS++   S+NG+DV  V+EYEK+RLSRIAENKKRMEALGLA LA +   SA NS+ IDKKGKRKLGED+D ADEDYKPGE
Subjt:  MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGE

Query:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK
        DSSSAED D     EEGD DFG+GKV  S  MK
Subjt:  DSSSAEDDDS----EEGDGDFGTGKVFESRRMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73440.1 calmodulin-related1.7e-0436.75Show/hide
Query:  SNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP--G
        S  + S  E E + +SS ++S+  +G+        +++YEK+RLSRIAENK R++ALG++K A +  + +  SKK  ++ KR  GE+    D+DY P   
Subjt:  SNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKP--G

Query:  EDSSSAEDDDSEEGDGD
        +     +DD+ EE D D
Subjt:  EDSSSAEDDDSEEGDGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCGCGACCTTTCTGATTACGAGAGCGAGGAAAATCCAAATTCTTCAAGCTCCGACTCAAAGAAGCCCAGAGGTTCCATGAATGGCAGAGACGTCAAGGATGT
AAATGAGTATGAGAAACGGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTAGGATTGGCTAAATTGGCGACCTCATTTACGAATTCCGCCATGAATT
CGAAGAAGATTGATAAGAAGGGGAAGCGGAAGCTGGGTGAGGATCATGATGCCGCCGATGAAGATTATAAGCCTGGCGAGGATTCCTCTAGTGCTGAAGATGATGATTCA
GAGGAAGGGGATGGAGATTTTGGAACTGGGAAAGTTTTTGAGTCTCGTCGAATGAAGGTCACAACTCTTGATGTCCCACCCTTTCTCCAATCAAGAAGTCTAATTTCAGC
GGTGGCAGGGCTTTGCGAAGGAATCGCAGAAGAGGGGGAGATCGAAGGAGATGAGGTTTCATTGAAGGAGGTTTGCTTTAAGGCAAAAGGTGGCTGTGGATGGTCTTATT
CGAGTGGTTGGTTACCTCCATCACGACATATTCTTCTTTTTGATGAGGTGGACTTTGGTAATGGAGAGGTTGACCTGGAGTGTTTGATGGAGGTGGGTCCCTCGGATCAA
CTGTTGAGTGAAGAAGATTATGTGTCAGACCCTTCAATTGTTAGCTATTCGGATGACGAATCGTTTCTATCTACCCTGTTTGTTATTGAGTCAAACTCGGTGAATATACG
AGCCTTATTCAATGAGGAAGGGATTATCGAGCCGAACGCGGGACAAAATCCAACAAGGGAGAGGGAGGAGACTATGACAGATAACAAAGCGCTTTTCGAGGAGGTAAGAG
CCATCGAGGGGTCGTATGATCGGATGGGGAAGCTAGTCAGTCCTATAGTGTCTCTTCCAGGTCTTGGAGGTTCTCTGTCTCACCCGGTCGACGTGTCGTGGGGGGTTAGA
GGCTCTCCTAATACTTTAGTTCCCGATGCTATAGGTTGTGGTCCAGAGGGGGGAGGTCCATCTGTTACTAATAGGGAGCCTGAGGGAAGTCCCTTGGATTACTCTAGTCC
TAGTCATACCCTGGGTTTGACCCTTAATATACGGGAAGCTGGGGGAGAAGAGGACGGGAGTCGGGAAGGTGGAGGAGGTAAGAAGAAGAGGCTGGTTAGGGAATTAAAGA
AGTTGGACTGTTCGGTTAATTATGATAAGAAGAAAGCTCCTTTGGGAGTGGGAGAGATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCGCGACCTTTCTGATTACGAGAGCGAGGAAAATCCAAATTCTTCAAGCTCCGACTCAAAGAAGCCCAGAGGTTCCATGAATGGCAGAGACGTCAAGGATGT
AAATGAGTATGAGAAACGGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTAGGATTGGCTAAATTGGCGACCTCATTTACGAATTCCGCCATGAATT
CGAAGAAGATTGATAAGAAGGGGAAGCGGAAGCTGGGTGAGGATCATGATGCCGCCGATGAAGATTATAAGCCTGGCGAGGATTCCTCTAGTGCTGAAGATGATGATTCA
GAGGAAGGGGATGGAGATTTTGGAACTGGGAAAGTTTTTGAGTCTCGTCGAATGAAGGTCACAACTCTTGATGTCCCACCCTTTCTCCAATCAAGAAGTCTAATTTCAGC
GGTGGCAGGGCTTTGCGAAGGAATCGCAGAAGAGGGGGAGATCGAAGGAGATGAGGTTTCATTGAAGGAGGTTTGCTTTAAGGCAAAAGGTGGCTGTGGATGGTCTTATT
CGAGTGGTTGGTTACCTCCATCACGACATATTCTTCTTTTTGATGAGGTGGACTTTGGTAATGGAGAGGTTGACCTGGAGTGTTTGATGGAGGTGGGTCCCTCGGATCAA
CTGTTGAGTGAAGAAGATTATGTGTCAGACCCTTCAATTGTTAGCTATTCGGATGACGAATCGTTTCTATCTACCCTGTTTGTTATTGAGTCAAACTCGGTGAATATACG
AGCCTTATTCAATGAGGAAGGGATTATCGAGCCGAACGCGGGACAAAATCCAACAAGGGAGAGGGAGGAGACTATGACAGATAACAAAGCGCTTTTCGAGGAGGTAAGAG
CCATCGAGGGGTCGTATGATCGGATGGGGAAGCTAGTCAGTCCTATAGTGTCTCTTCCAGGTCTTGGAGGTTCTCTGTCTCACCCGGTCGACGTGTCGTGGGGGGTTAGA
GGCTCTCCTAATACTTTAGTTCCCGATGCTATAGGTTGTGGTCCAGAGGGGGGAGGTCCATCTGTTACTAATAGGGAGCCTGAGGGAAGTCCCTTGGATTACTCTAGTCC
TAGTCATACCCTGGGTTTGACCCTTAATATACGGGAAGCTGGGGGAGAAGAGGACGGGAGTCGGGAAGGTGGAGGAGGTAAGAAGAAGAGGCTGGTTAGGGAATTAAAGA
AGTTGGACTGTTCGGTTAATTATGATAAGAAGAAAGCTCCTTTGGGAGTGGGAGAGATCTAG
Protein sequenceShow/hide protein sequence
MSNRDLSDYESEENPNSSSSDSKKPRGSMNGRDVKDVNEYEKRRLSRIAENKKRMEALGLAKLATSFTNSAMNSKKIDKKGKRKLGEDHDAADEDYKPGEDSSSAEDDDS
EEGDGDFGTGKVFESRRMKVTTLDVPPFLQSRSLISAVAGLCEGIAEEGEIEGDEVSLKEVCFKAKGGCGWSYSSGWLPPSRHILLFDEVDFGNGEVDLECLMEVGPSDQ
LLSEEDYVSDPSIVSYSDDESFLSTLFVIESNSVNIRALFNEEGIIEPNAGQNPTREREETMTDNKALFEEVRAIEGSYDRMGKLVSPIVSLPGLGGSLSHPVDVSWGVR
GSPNTLVPDAIGCGPEGGGPSVTNREPEGSPLDYSSPSHTLGLTLNIREAGGEEDGSREGGGGKKKRLVRELKKLDCSVNYDKKKAPLGVGEI