; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024368 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024368
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-Pol polyprotein
Genome locationscaffold4:22967247..22968442
RNA-Seq ExpressionSpg024368
SyntenySpg024368
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]3.2e-1328.32Show/hide
Query:  FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKA-------------------------------PLHPRG
        F+T+VI Q  W++FC HP   +VPLVREFYA   + +     V+   V F++  IN ++ ++                                 + P+G
Subjt:  FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKA-------------------------------PLHPRG

Query:  -----NDAIKNP--------SAKLMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSC--GRKRAGKLFFGSLITQSCQRVKIVLGKDEKHHFFK
                +K          +A+ M +T   T++ +RV+LLYSI+TG+ +NI  I  ++I +C   RKR G L+F SLITQ   +  +   KDE      
Subjt:  -----NDAIKNP--------SAKLMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSC--GRKRAGKLFFGSLITQSCQRVKIVLGKDEKHHFFK

Query:  PTIDLPLIGKIQQNNTQRKDKASTSQ
          I    I +I Q       K   ++
Subjt:  PTIDLPLIGKIQQNNTQRKDKASTSQ

KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.9e-1328.14Show/hide
Query:  VKLKAKSPKAPKNPFPEVFKDVNFQEKMEIMRKKDFLNEKGF---SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTV-VRG
        + L  K  +  KN F E+ K    ++ +  +R K+F  ++G        G++  ++ + I +  W + C  P   V  +V+EFYA +    +   + VR 
Subjt:  VKLKAKSPKAPKNPFPEVFKDVNFQEKMEIMRKKDFLNEKGF---SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTV-VRG

Query:  KMVSFSSVDINMVYRIK---------------APLHPRGNDAIKNPSAK-------------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDIL
          V FS  DIN  Y +K                 +  RG    K    K             L+ T+ DST+S ER+ +LY I+ G +IN+G +I ++I 
Subjt:  KMVSFSSVDINMVYRIK---------------APLHPRGNDAIKNPSAK-------------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDIL

Query:  SCGRKRAGKLFFGSLITQSCQRVKIVLGKDE
         C  +  GKLFF  LIT+ C+   + +  DE
Subjt:  SCGRKRAGKLFFGSLITQSCQRVKIVLGKDE

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.0e-1931.28Show/hide
Query:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------
        EKGF    S   G L  F+ +VITQ  W++FCAHP++ +VPLVREFYA   +   N   VRG  VS+S   IN V+ +  P+    ++ I+N        
Subjt:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------

Query:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ
                                    P+AK         L+ TT   T+S +R++LL+S++ G  IN+G +I  +I +C  ++ G LFF SLIT+ C+
Subjt:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ

Query:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ
          +     +E+       ID   + +I Q+  T+   + S+S+
Subjt:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.1e-2031.28Show/hide
Query:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------
        EKGF    S   G L  F+ +VITQ  W++FCAHP++ +VPLVREFYA   +   N   VRG  VS+S   IN V+ +  P+    ++ I+N        
Subjt:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------

Query:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ
                                    P+AK         L+ TT   T+S +R++LL+S++ G  IN+G +I  +I +C  ++ G LFF SLIT+ C+
Subjt:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ

Query:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ
          +     +E+       ID   + +I Q+  T+   + S+S+
Subjt:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.7e-1729.96Show/hide
Query:  KDVNFQEKMEIMRKKDFLNEKGFSNRAGTLSD---------FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVY
        K V F+ K   +R ++ +  +  S     + D         F+  VI Q  WQ FCAHP++ +VPLVREFY        +   +RG  V  S   IN ++
Subjt:  KDVNFQEKMEIMRKKDFLNEKGFSNRAGTLSD---------FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVY

Query:  RIKAPLHPRG---NDAIK--------------------------------NPSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIRED
         +  P+        D  K                                NP AK         L+ TT   T+S E V LLYS++TG  IN+G +I  +
Subjt:  RIKAPLHPRG---NDAIK--------------------------------NPSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIRED

Query:  ILSCGRKRAGKLFFGSLITQSCQRVKI-VLGKDEKHH
        I +C  +++G LFF SLIT  C+  +   L  +EK H
Subjt:  ILSCGRKRAGKLFFGSLITQSCQRVKI-VLGKDEKHH

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.0e-2031.28Show/hide
Query:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------
        EKGF    S   G L  F+ +VITQ  W++FCAHP++ +VPLVREFYA   +   N   VRG  VS+S   IN V+ +  P+    ++ I+N        
Subjt:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------

Query:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ
                                    P+AK         L+ TT   T+S +R++LL+S++ G  IN+G +I  +I +C  ++ G LFF SLIT+ C+
Subjt:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ

Query:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ
          +     +E+       ID   + +I Q+  T+   + S+S+
Subjt:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ

A0A2P5BCG4 Uncharacterized protein (Fragment)2.9e-2031.28Show/hide
Query:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------
        EKGF    S   G L  F+ +VITQ  W++FCAHP++ +VPLVREFYA   +   N   VRG  VS+S   IN V+ +  P+    ++ I+N        
Subjt:  EKGF----SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKN--------

Query:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ
                                    P+AK         L+ TT   T+S +R++LL+S++ G  IN+G +I  +I +C  ++ G LFF SLIT+ C+
Subjt:  ----------------------------PSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQ

Query:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ
          +     +E+       ID   + +I Q+  T+   + S+S+
Subjt:  RVKIVLGKDEKHHFFKPTIDLPLIGKI-QQNNTQRKDKASTSQ

A0A2P5DAQ2 Uncharacterized protein1.8e-1729.96Show/hide
Query:  KDVNFQEKMEIMRKKDFLNEKGFSNRAGTLSD---------FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVY
        K V F+ K   +R ++ +  +  S     + D         F+  VI Q  WQ FCAHP++ +VPLVREFY        +   +RG  V  S   IN ++
Subjt:  KDVNFQEKMEIMRKKDFLNEKGFSNRAGTLSD---------FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVY

Query:  RIKAPLHPRG---NDAIK--------------------------------NPSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIRED
         +  P+        D  K                                NP AK         L+ TT   T+S E V LLYS++TG  IN+G +I  +
Subjt:  RIKAPLHPRG---NDAIK--------------------------------NPSAK---------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIRED

Query:  ILSCGRKRAGKLFFGSLITQSCQRVKI-VLGKDEKHH
        I +C  +++G LFF SLIT  C+  +   L  +EK H
Subjt:  ILSCGRKRAGKLFFGSLITQSCQRVKI-VLGKDEKHH

A0A7J6FZ22 Uncharacterized protein9.1e-1428.14Show/hide
Query:  VKLKAKSPKAPKNPFPEVFKDVNFQEKMEIMRKKDFLNEKGF---SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTV-VRG
        + L  K  +  KN F E+ K    ++ +  +R K+F  ++G        G++  ++ + I +  W + C  P   V  +V+EFYA +    +   + VR 
Subjt:  VKLKAKSPKAPKNPFPEVFKDVNFQEKMEIMRKKDFLNEKGF---SNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTV-VRG

Query:  KMVSFSSVDINMVYRIK---------------APLHPRGNDAIKNPSAK-------------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDIL
          V FS  DIN  Y +K                 +  RG    K    K             L+ T+ DST+S ER+ +LY I+ G +IN+G +I ++I 
Subjt:  KMVSFSSVDINMVYRIK---------------APLHPRGNDAIKNPSAK-------------LMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDIL

Query:  SCGRKRAGKLFFGSLITQSCQRVKIVLGKDE
         C  +  GKLFF  LIT+ C+   + +  DE
Subjt:  SCGRKRAGKLFFGSLITQSCQRVKIVLGKDE

W9QTD9 Uncharacterized protein1.6e-1328.32Show/hide
Query:  FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKA-------------------------------PLHPRG
        F+T+VI Q  W++FC HP   +VPLVREFYA   + +     V+   V F++  IN ++ ++                                 + P+G
Subjt:  FVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKA-------------------------------PLHPRG

Query:  -----NDAIKNP--------SAKLMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSC--GRKRAGKLFFGSLITQSCQRVKIVLGKDEKHHFFK
                +K          +A+ M +T   T++ +RV+LLYSI+TG+ +NI  I  ++I +C   RKR G L+F SLITQ   +  +   KDE      
Subjt:  -----NDAIKNP--------SAKLMSTTQDSTISVERVMLLYSIMTGLEINIGSIIREDILSC--GRKRAGKLFFGSLITQSCQRVKIVLGKDEKHHFFK

Query:  PTIDLPLIGKIQQNNTQRKDKASTSQ
          I    I +I Q       K   ++
Subjt:  PTIDLPLIGKIQQNNTQRKDKASTSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGACCTCCACCAGCTGCTGATAGTACCTCTTCGGCAGAGAAGAAGAATGAAAAGGAAGTTGAAAAAGAGGAGGCCATGACCTCTACTTTGAGGAAGAAAAGAAA
AAGAGAGATAGGAGCCGAGAGGAGAACAAAGAATAAGAATGACCCCATTTTTGCCAAGAGGTCGAGGACAAGGTCCATCGATGCCTCTCCTGTAGCTCCTCCTACCTCCA
CACCTGTCAAATTGAAAGCCAAATCGCCTAAAGCTCCAAAGAATCCGTTTCCTGAAGTCTTCAAAGATGTCAATTTCCAGGAGAAAATGGAGATTATGAGAAAAAAAGAC
TTCTTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACCTTGTCAGACTTTGTGACGAAAGTCATTACCCAAGACAAGTGGCAGGAGTTTTGTGCTCACCCTCAAGAGGT
TGTGGTGCCTTTAGTTCGAGAATTCTATGCCGGCTGGAGGGAAGAGAGCATGAACATGACGGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATTAACATGG
TGTACAGGATCAAGGCACCCTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACTGATGTCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTT
ATGCTTCTCTACAGCATTATGACGGGGTTGGAGATAAACATAGGGAGCATCATCAGAGAAGATATCCTTTCATGTGGAAGGAAGAGAGCAGGGAAGTTGTTCTTTGGGTC
ACTAATTACTCAGTCGTGTCAGAGGGTGAAGATAGTTCTTGGAAAAGATGAGAAGCATCACTTTTTCAAGCCAACCATTGACTTACCTCTAATCGGGAAGATTCAACAGA
ACAACACCCAAAGAAAGGACAAGGCTTCAACTTCCCAAGCTACTCCACCACCGGGGTTGACACCAGCTTCACCTCATGAGCATACTCCTATTTCAGGGCCTACACCATCG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGACCTCCACCAGCTGCTGATAGTACCTCTTCGGCAGAGAAGAAGAATGAAAAGGAAGTTGAAAAAGAGGAGGCCATGACCTCTACTTTGAGGAAGAAAAGAAA
AAGAGAGATAGGAGCCGAGAGGAGAACAAAGAATAAGAATGACCCCATTTTTGCCAAGAGGTCGAGGACAAGGTCCATCGATGCCTCTCCTGTAGCTCCTCCTACCTCCA
CACCTGTCAAATTGAAAGCCAAATCGCCTAAAGCTCCAAAGAATCCGTTTCCTGAAGTCTTCAAAGATGTCAATTTCCAGGAGAAAATGGAGATTATGAGAAAAAAAGAC
TTCTTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACCTTGTCAGACTTTGTGACGAAAGTCATTACCCAAGACAAGTGGCAGGAGTTTTGTGCTCACCCTCAAGAGGT
TGTGGTGCCTTTAGTTCGAGAATTCTATGCCGGCTGGAGGGAAGAGAGCATGAACATGACGGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATTAACATGG
TGTACAGGATCAAGGCACCCTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACTGATGTCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTT
ATGCTTCTCTACAGCATTATGACGGGGTTGGAGATAAACATAGGGAGCATCATCAGAGAAGATATCCTTTCATGTGGAAGGAAGAGAGCAGGGAAGTTGTTCTTTGGGTC
ACTAATTACTCAGTCGTGTCAGAGGGTGAAGATAGTTCTTGGAAAAGATGAGAAGCATCACTTTTTCAAGCCAACCATTGACTTACCTCTAATCGGGAAGATTCAACAGA
ACAACACCCAAAGAAAGGACAAGGCTTCAACTTCCCAAGCTACTCCACCACCGGGGTTGACACCAGCTTCACCTCATGAGCATACTCCTATTTCAGGGCCTACACCATCG
TAG
Protein sequenceShow/hide protein sequence
MRGPPPAADSTSSAEKKNEKEVEKEEAMTSTLRKKRKREIGAERRTKNKNDPIFAKRSRTRSIDASPVAPPTSTPVKLKAKSPKAPKNPFPEVFKDVNFQEKMEIMRKKD
FLNEKGFSNRAGTLSDFVTKVITQDKWQEFCAHPQEVVVPLVREFYAGWREESMNMTVVRGKMVSFSSVDINMVYRIKAPLHPRGNDAIKNPSAKLMSTTQDSTISVERV
MLLYSIMTGLEINIGSIIREDILSCGRKRAGKLFFGSLITQSCQRVKIVLGKDEKHHFFKPTIDLPLIGKIQQNNTQRKDKASTSQATPPPGLTPASPHEHTPISGPTPS