; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024372 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024372
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold4:23155116..23161408
RNA-Seq ExpressionSpg024372
SyntenySpg024372
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037079.1 suppressor of mec-8 and unc-52 protein-like protein 1 [Cucumis melo var. makuwa]1.7e-1838.33Show/hide
Query:  WKRNFFSKVGRMTLIRST-------SLVLWGVPL-----------HFVF-------GFHR---SLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPS
        WK+ FF + GR+TLI+S        +L+L+  P             F++       GFH    +L+N ETT + +LLSL++     S RRDVR W+ +PS
Subjt:  WKRNFFSKVGRMTLIRST-------SLVLWGVPL-----------HFVF-------GFHR---SLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPS

Query:  AGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLL
         GFS                      +++KA KK  FF WQV+ G VNT+DRL R + P+V PF CMLCRK EE+LD+++
Subjt:  AGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLL

KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]2.4e-2534.78Show/hide
Query:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFF--------------------------SKVGRMTLIRSTSLV--LWGV-----------PLHFVFGFHRS
        PL  NP++ SFW+ + EK++K  A WK+                              ++  ++L+RS  L+  L G+           P+ F +GF  +
Subjt:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFF--------------------------SKVGRMTLIRSTSLV--LWGV-----------PLHFVFGFHRS

Query:  LSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPF
        L+N E T + +LL+L++  N K +RRDVR  + +PS GF C+S F  +++ SP  E VF  + + K PKK  FF WQV+ G V  +DRL R +  ++ PF
Subjt:  LSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPF

Query:  CCMLCRK
        CC+LCRK
Subjt:  CCMLCRK

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]5.6e-2240Show/hide
Query:  LVLWGVPLHFVFGFHRSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSV
        LV  G    F FGF R+LS+ ET+N++AL+SL+E  + +  RRDV  WS  P  GF C+SFFQ +VN +P  ESV S +W++K P+K + F+WQV     
Subjt:  LVLWGVPLHFVFGFHRSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSV

Query:  NTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVFEFHFA
                                 EE+LDHLLW CE    VW  F + F   +A
Subjt:  NTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVFEFHFA

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]7.1e-2547.06Show/hide
Query:  NLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDC
        +L    R+V  WS +PS GFS +S F  +++ SP RE VF  +W++K  KK  FF WQV+    N +DRL R   P     CC+LCRKA+E+LDHLLWDC
Subjt:  NLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDC

Query:  EFARSVWSLFFEVFEFHFA
        ++AR+VW  F + F+   A
Subjt:  EFARSVWSLFFEVFEFHFA

XP_008464727.1 PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]6.9e-2042.74Show/hide
Query:  RSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVD
        R  S  E T + +LLS ++  + +  RRD+  W+ +PS GF   S F  +++ +P +E VF  +W    PKK +FF WQV+   VN +DRL R +  +V 
Subjt:  RSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVD

Query:  PFCCMLCRKAEENLDHL
         FCCMLC+KAE +LDHL
Subjt:  PFCCMLCRKAEENLDHL

TrEMBL top hitse value%identityAlignment
A0A1S3CMM8 uncharacterized protein LOC1035025433.3e-2042.74Show/hide
Query:  RSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVD
        R  S  E T + +LLS ++  + +  RRD+  W+ +PS GF   S F  +++ +P +E VF  +W    PKK +FF WQV+   VN +DRL R +  +V 
Subjt:  RSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVD

Query:  PFCCMLCRKAEENLDHL
         FCCMLC+KAE +LDHL
Subjt:  PFCCMLCRKAEENLDHL

A0A2N9IA81 Uncharacterized protein4.8e-1929.24Show/hide
Query:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFFSKVGRMTLIRSTSLVLWGVPLHFVFGF-------HR---------------------------------
        PL    K+ S WNPIIE+++KR A WKR + SK G++TLI+ST   L  +P +F+  F       HR                                 
Subjt:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFFSKVGRMTLIRSTSLVLWGVPLHFVFGF-------HR---------------------------------

Query:  --SLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVV
          S+ + E  +I + + L+   ++  +  D   W    S  F+ + +++F+ +    R   +  +WK K P +  FF+W    G + TID L R +  ++
Subjt:  --SLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVV

Query:  DPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVF
          +CC LC+++ E+ DHLL  C+ AR +W L   VF
Subjt:  DPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVF

A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X21.2e-2534.78Show/hide
Query:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFF--------------------------SKVGRMTLIRSTSLV--LWGV-----------PLHFVFGFHRS
        PL  NP++ SFW+ + EK++K  A WK+                              ++  ++L+RS  L+  L G+           P+ F +GF  +
Subjt:  PLAHNPKSSSFWNPIIEKVQKRPASWKRNFF--------------------------SKVGRMTLIRSTSLV--LWGV-----------PLHFVFGFHRS

Query:  LSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPF
        L+N E T + +LL+L++  N K +RRDVR  + +PS GF C+S F  +++ SP  E VF  + + K PKK  FF WQV+ G V  +DRL R +  ++ PF
Subjt:  LSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPF

Query:  CCMLCRK
        CC+LCRK
Subjt:  CCMLCRK

A0A5D3CI74 Calpain-type cysteine protease DEK12.7e-2240Show/hide
Query:  LVLWGVPLHFVFGFHRSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSV
        LV  G    F FGF R+LS+ ET+N++AL+SL+E  + +  RRDV  WS  P  GF C+SFFQ +VN +P  ESV S +W++K P+K + F+WQV     
Subjt:  LVLWGVPLHFVFGFHRSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSV

Query:  NTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVFEFHFA
                                 EE+LDHLLW CE    VW  F + F   +A
Subjt:  NTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVFEFHFA

A0A5D3E255 Reverse transcriptase3.4e-2547.06Show/hide
Query:  NLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDC
        +L    R+V  WS +PS GFS +S F  +++ SP RE VF  +W++K  KK  FF WQV+    N +DRL R   P     CC+LCRKA+E+LDHLLWDC
Subjt:  NLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDC

Query:  EFARSVWSLFFEVFEFHFA
        ++AR+VW  F + F+   A
Subjt:  EFARSVWSLFFEVFEFHFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.2e-0736.9Show/hide
Query:  VNLSPVRESV--FSCLW-KVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLF
        ++L+P+ E V  F  +W K K P K  F AW  +   ++T DR+  +    + P  C+ C   +E   HL +DCEFAR VW  F
Subjt:  VNLSPVRESV--FSCLW-KVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLF

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.7e-0526.52Show/hide
Query:  SNSETTNIMALLSLIERAN--LKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESV--FSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVV
        S S    I+ L +L+  A   L     D   W  D  A  +  S  +    L P   +V     +W      K  F  W V +  ++T DRL      + 
Subjt:  SNSETTNIMALLSLIERAN--LKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSPVRESV--FSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVV

Query:  DPFCCMLCRKAEENLDHLLWDCEFARSVWSLF
         P  C+LC   +++  HL ++C+F+  VW  F
Subjt:  DPFCCMLCRKAEENLDHLLWDCEFARSVWSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCGGAAATTGTGGAGGAAATGAGGGAAGAAGGACAAGACATGGAATGGGAAGCGAATTTCAATCCACTTGAGGAAGAGTTTGGCTCAGATCCATCTATCCTAAG
CTACTCAGAGGATGAATCATTCTTATCTACCCCTACAGCCAAGGATATGGAAGTCCCAAATCGGGGTTCCTCGTTCATGAATGAAGGGGTTGTTGTCGAGCAAAATCAGG
ACGAGGCGAAGGCAAGTCGGGTTTATTCTCAGTCTATGACGGTGGTTGAGACTCCCTCTCCGTCTGCCGTGGGTGTGCAGCAGCCTGGACCATCTGCCGAGGATCCTTCT
CACTCGATAGTGGAGGTTAGTCCTTCTGGAATGCCAAACCAAGTACGTGCCTTTTCTTTGAAGTCTTTACCTTTCGTTTCGGGTTTTGGGGAGATGAGAGTCTTGTCAGG
AGAGTTTGGCCCGTCTTTAATCTCAAGTCCTAATGCTTTTAGAATAGGTTTCGACGGGAATGACCATCTTTGTGCTTTAGGACTAGTTTTAGAGAACTCGGTTTGTAATT
CTCATTCCTCTAGGCATGTAAGGGTTCCTTTTCAGGGAAGTGTTATAGGCCAATGGCCCTGGGGTTGGGCGACGTTAGCTTCGATGGGCATTCAGGCGACCCCAACTAGG
GGAGGCCCTTTGAAATCCATCGATCTCCCAGATGCCCCTATGAAAGGAAATCAATCTCGTCAAAGGAAAGGGAAAGGTGGAACCAATAAGACGGATAGGGAACTGAAGAA
ACTAATGGGCTCAATTAACTATAATCGTAAGAAGAGGGAGAAGAGAAGTCTTGTGAAGGAGGTGTTTTCCCAAGAAAACTCGAACATTGTGGTCCTTCTTGAGACTAAGT
GGCAGAAGTACTTTAGAAGATTCGTGAAGAGTGTTTGGGGTAGGAGAAAAGTGGAGTGGGCTGGTATTGAGTCCCTTGGGGCATCGGGTGGTGTTCTTTTTATGTCTCGA
GGTAGAAATGAGTTCTGGAACGAGCTGGGTGACCTTTCTGGCCTTTGCGGGTCTTACTGGTGCATTATGGGAGACTTTAATGTCACGAGGGATAAGGCTGGGTACCTTAT
CTTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAATCATCCATGTAGGAGACATGCGGGTGGGAGTATCCTATGCAATGAGGGAAG
ACCGAATGGGGGATGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTGTTGGGAAATATTCTACAGTGAGAAGAGTGCAGCTGTCTTACGACCTCTTGCTCAC
AATCCTAAGTCTTCTTCCTTTTGGAATCCAATCATCGAGAAAGTCCAGAAAAGACCTGCTTCTTGGAAGAGAAATTTCTTCTCCAAAGTGGGGAGGATGACTCTCATTCG
TTCCACATCCTTGGTTTTGTGGGGAGTTCCACTTCATTTTGTTTTCGGTTTTCATCGTTCGTTATCTAATAGTGAGACCACGAACATCATGGCCCTCTTATCTTTGATCG
AGAGGGCTAACCTTAAATCGGACAGGAGAGATGTGCGTTTTTGGAGTCTTGATCCCTCTGCGGGCTTTTCTTGCAGATCGTTTTTTCAGTTTATGGTCAATCTCTCCCCC
GTTAGAGAGTCTGTCTTTTCGTGTCTCTGGAAGGTTAAAGCTCCGAAGAAGGACTTGTTCTTTGCTTGGCAGGTCATCTTTGGTAGTGTTAACACTATTGATAGGCTTTC
GAGAGTGAAGGCTCCTGTTGTCGATCCTTTTTGTTGCATGTTATGTCGGAAGGCTGAAGAAAATCTTGATCATTTGTTATGGGATTGTGAATTTGCTCGCTCTGTCTGGA
GTCTCTTCTTCGAGGTCTTCGAGTTTCATTTTGCGAGCCAATCACCGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCGGAAATTGTGGAGGAAATGAGGGAAGAAGGACAAGACATGGAATGGGAAGCGAATTTCAATCCACTTGAGGAAGAGTTTGGCTCAGATCCATCTATCCTAAG
CTACTCAGAGGATGAATCATTCTTATCTACCCCTACAGCCAAGGATATGGAAGTCCCAAATCGGGGTTCCTCGTTCATGAATGAAGGGGTTGTTGTCGAGCAAAATCAGG
ACGAGGCGAAGGCAAGTCGGGTTTATTCTCAGTCTATGACGGTGGTTGAGACTCCCTCTCCGTCTGCCGTGGGTGTGCAGCAGCCTGGACCATCTGCCGAGGATCCTTCT
CACTCGATAGTGGAGGTTAGTCCTTCTGGAATGCCAAACCAAGTACGTGCCTTTTCTTTGAAGTCTTTACCTTTCGTTTCGGGTTTTGGGGAGATGAGAGTCTTGTCAGG
AGAGTTTGGCCCGTCTTTAATCTCAAGTCCTAATGCTTTTAGAATAGGTTTCGACGGGAATGACCATCTTTGTGCTTTAGGACTAGTTTTAGAGAACTCGGTTTGTAATT
CTCATTCCTCTAGGCATGTAAGGGTTCCTTTTCAGGGAAGTGTTATAGGCCAATGGCCCTGGGGTTGGGCGACGTTAGCTTCGATGGGCATTCAGGCGACCCCAACTAGG
GGAGGCCCTTTGAAATCCATCGATCTCCCAGATGCCCCTATGAAAGGAAATCAATCTCGTCAAAGGAAAGGGAAAGGTGGAACCAATAAGACGGATAGGGAACTGAAGAA
ACTAATGGGCTCAATTAACTATAATCGTAAGAAGAGGGAGAAGAGAAGTCTTGTGAAGGAGGTGTTTTCCCAAGAAAACTCGAACATTGTGGTCCTTCTTGAGACTAAGT
GGCAGAAGTACTTTAGAAGATTCGTGAAGAGTGTTTGGGGTAGGAGAAAAGTGGAGTGGGCTGGTATTGAGTCCCTTGGGGCATCGGGTGGTGTTCTTTTTATGTCTCGA
GGTAGAAATGAGTTCTGGAACGAGCTGGGTGACCTTTCTGGCCTTTGCGGGTCTTACTGGTGCATTATGGGAGACTTTAATGTCACGAGGGATAAGGCTGGGTACCTTAT
CTTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAATCATCCATGTAGGAGACATGCGGGTGGGAGTATCCTATGCAATGAGGGAAG
ACCGAATGGGGGATGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTGTTGGGAAATATTCTACAGTGAGAAGAGTGCAGCTGTCTTACGACCTCTTGCTCAC
AATCCTAAGTCTTCTTCCTTTTGGAATCCAATCATCGAGAAAGTCCAGAAAAGACCTGCTTCTTGGAAGAGAAATTTCTTCTCCAAAGTGGGGAGGATGACTCTCATTCG
TTCCACATCCTTGGTTTTGTGGGGAGTTCCACTTCATTTTGTTTTCGGTTTTCATCGTTCGTTATCTAATAGTGAGACCACGAACATCATGGCCCTCTTATCTTTGATCG
AGAGGGCTAACCTTAAATCGGACAGGAGAGATGTGCGTTTTTGGAGTCTTGATCCCTCTGCGGGCTTTTCTTGCAGATCGTTTTTTCAGTTTATGGTCAATCTCTCCCCC
GTTAGAGAGTCTGTCTTTTCGTGTCTCTGGAAGGTTAAAGCTCCGAAGAAGGACTTGTTCTTTGCTTGGCAGGTCATCTTTGGTAGTGTTAACACTATTGATAGGCTTTC
GAGAGTGAAGGCTCCTGTTGTCGATCCTTTTTGTTGCATGTTATGTCGGAAGGCTGAAGAAAATCTTGATCATTTGTTATGGGATTGTGAATTTGCTCGCTCTGTCTGGA
GTCTCTTCTTCGAGGTCTTCGAGTTTCATTTTGCGAGCCAATCACCGTTGTAG
Protein sequenceShow/hide protein sequence
MQAEIVEEMREEGQDMEWEANFNPLEEEFGSDPSILSYSEDESFLSTPTAKDMEVPNRGSSFMNEGVVVEQNQDEAKASRVYSQSMTVVETPSPSAVGVQQPGPSAEDPS
HSIVEVSPSGMPNQVRAFSLKSLPFVSGFGEMRVLSGEFGPSLISSPNAFRIGFDGNDHLCALGLVLENSVCNSHSSRHVRVPFQGSVIGQWPWGWATLASMGIQATPTR
GGPLKSIDLPDAPMKGNQSRQRKGKGGTNKTDRELKKLMGSINYNRKKREKRSLVKEVFSQENSNIVVLLETKWQKYFRRFVKSVWGRRKVEWAGIESLGASGGVLFMSR
GRNEFWNELGDLSGLCGSYWCIMGDFNVTRDKAGYLILVTLCDTAHLVFDTDAMIQIIHVGDMRVGVSYAMREDRMGDGNITVQDGIHSFPCWEIFYSEKSAAVLRPLAH
NPKSSSFWNPIIEKVQKRPASWKRNFFSKVGRMTLIRSTSLVLWGVPLHFVFGFHRSLSNSETTNIMALLSLIERANLKSDRRDVRFWSLDPSAGFSCRSFFQFMVNLSP
VRESVFSCLWKVKAPKKDLFFAWQVIFGSVNTIDRLSRVKAPVVDPFCCMLCRKAEENLDHLLWDCEFARSVWSLFFEVFEFHFASQSPL