; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024393 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024393
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:23347864..23349441
RNA-Seq ExpressionSpg024393
SyntenySpg024393
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.1e-1930.15Show/hide
Query:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS
        K V     +  + ETE     YE  + N           R    E+GF  D       LP F+   IT H W+QFCA PE                P+ +
Subjt:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS

Query:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL
         V  R  Q+   ++A              SE +   +   L      V + GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS+D++L
Subjt:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL

Query:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ
        L+ ++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P  + +  L +   ID   +AR+ Q
Subjt:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-2328.53Show/hide
Query:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS
        K V     +  + ETE     YE  + N           R    E+GF  D       LP F+   IT H W+QFCA PE                P  +
Subjt:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS

Query:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL
         V  R  Q+   ++A              SE +   +   L      V   GA+W +S     T   + L   A +W  F+K RLLPTTH  TVS+D++L
Subjt:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL

Query:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ----------------------------
        L+ ++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P  + +  L +   ID   +AR+ Q                            
Subjt:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ----------------------------

Query:  -----------TQEARQ----------GGQAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPVFPNDLL
                    QE +Q            Q Q +  Y K +D+ L+KALQ+NF++P P+FP FP ++L
Subjt:  -----------TQEARQ----------GGQAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPVFPNDLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.1e-1732.04Show/hide
Query:  LTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP----------TSLE
        L  +   L   A +W  F+K RLLPTTH  TVS+D++LL++++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P          T   
Subjt:  LTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP----------TSLE

Query:  DVILIDK-------EIIDTPNLARLQQTQEARQGG--------------------------------QAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPV
        D I + +       E+   P+ +R      +R  G                                Q Q +  Y K +D+ L+KALQ+NF++P P+FP 
Subjt:  DVILIDK-------EIIDTPNLARLQQTQEARQGG--------------------------------QAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPV

Query:  FPNDLL
        FP +LL
Subjt:  FPNDLL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.7e-1626.67Show/hide
Query:  KETQEQQVQGEVVPEPPHRRHCKQKDDKGKGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGEDLPHFLRPGITNHGWEQFCAK
        KE ++  V+G +  +   R+ C  ++   + V    ++  + E++   + YE  + N   +     ++++F+++     + P F+   I  H W+ FCA 
Subjt:  KETQEQQVQGEVVPEPPHRRHCKQKDDKGKGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGEDLPHFLRPGITNHGWEQFCAK

Query:  PE----------------PINSNVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWL
        PE                P +  V  R  Q+    +A              SE V   +  +L      V I GA+W +S     T   + L   A +W 
Subjt:  PE----------------PINSNVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWL

Query:  GFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP
         F+K RLLPTTH  TVS++ V L++++L   SI+V ++I  EI  C  +K G +FFP+ IT +C     P
Subjt:  GFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.5e-1931.42Show/hide
Query:  SEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKV
        SE +   +  +L      V   GA+W +S     T   + L   A +W  F+K RLLPTTH   VS+D++LL+ ++L   SI+V ++I SEI  C  +K 
Subjt:  SEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKV

Query:  GKVFFPNTITILCNRVGVPTSLE--------DVILIDK-------EIIDTPNLARLQQTQEARQGG---------------------QAQTYSTYVKRKD
        G +FFP+ IT LC       + E        D I + +       E    P+ +R      +R  G                     Q Q +  Y K +D
Subjt:  GKVFFPNTITILCNRVGVPTSLE--------DVILIDK-------EIIDTPNLARLQQTQEARQGG---------------------QAQTYSTYVKRKD

Query:  SMLRKALQSNFSKPYPSFPVFPNDLL
        + L+KALQ+NF++P P+FP FP ++L
Subjt:  SMLRKALQSNFSKPYPSFPVFPNDLL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.9e-1930.15Show/hide
Query:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS
        K V     +  + ETE     YE  + N           R    E+GF  D       LP F+   IT H W+QFCA PE                P+ +
Subjt:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS

Query:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL
         V  R  Q+   ++A              SE +   +   L      V + GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS+D++L
Subjt:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL

Query:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ
        L+ ++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P  + +  L +   ID   +AR+ Q
Subjt:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ

A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-2428.53Show/hide
Query:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS
        K V     +  + ETE     YE  + N           R    E+GF  D       LP F+   IT H W+QFCA PE                P  +
Subjt:  KGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGED-------LPHFLRPGITNHGWEQFCAKPE----------------PINS

Query:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL
         V  R  Q+   ++A              SE +   +   L      V   GA+W +S     T   + L   A +W  F+K RLLPTTH  TVS+D++L
Subjt:  NVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVL

Query:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ----------------------------
        L+ ++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P  + +  L +   ID   +AR+ Q                            
Subjt:  LVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQ----------------------------

Query:  -----------TQEARQ----------GGQAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPVFPNDLL
                    QE +Q            Q Q +  Y K +D+ L+KALQ+NF++P P+FP FP ++L
Subjt:  -----------TQEARQ----------GGQAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPVFPNDLL

A0A2P5CEY2 Uncharacterized protein5.5e-1832.04Show/hide
Query:  LTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP----------TSLE
        L  +   L   A +W  F+K RLLPTTH  TVS+D++LL++++L   SI+V ++I SEI  C  +K G +FFP+ IT LC     P          T   
Subjt:  LTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP----------TSLE

Query:  DVILIDK-------EIIDTPNLARLQQTQEARQGG--------------------------------QAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPV
        D I + +       E+   P+ +R      +R  G                                Q Q +  Y K +D+ L+KALQ+NF++P P+FP 
Subjt:  DVILIDK-------EIIDTPNLARLQQTQEARQGG--------------------------------QAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPV

Query:  FPNDLL
        FP +LL
Subjt:  FPNDLL

A0A2P5DAQ2 Uncharacterized protein1.8e-1626.67Show/hide
Query:  KETQEQQVQGEVVPEPPHRRHCKQKDDKGKGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGEDLPHFLRPGITNHGWEQFCAK
        KE ++  V+G +  +   R+ C  ++   + V    ++  + E++   + YE  + N   +     ++++F+++     + P F+   I  H W+ FCA 
Subjt:  KETQEQQVQGEVVPEPPHRRHCKQKDDKGKGVVEATTEVEEAETEEPRLPYERFVNNLTRAKYLDILKRDFLFERGFGEDLPHFLRPGITNHGWEQFCAK

Query:  PE----------------PINSNVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWL
        PE                P +  V  R  Q+    +A              SE V   +  +L      V I GA+W +S     T   + L   A +W 
Subjt:  PE----------------PINSNVVSRSTQILTKKKA-------------SSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWL

Query:  GFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP
         F+K RLLPTTH  TVS++ V L++++L   SI+V ++I  EI  C  +K G +FFP+ IT +C     P
Subjt:  GFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVP

A0A2P5DXM3 Uncharacterized protein1.7e-1931.42Show/hide
Query:  SEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKV
        SE +   +  +L      V   GA+W +S     T   + L   A +W  F+K RLLPTTH   VS+D++LL+ ++L   SI+V ++I SEI  C  +K 
Subjt:  SEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYLKSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKV

Query:  GKVFFPNTITILCNRVGVPTSLE--------DVILIDK-------EIIDTPNLARLQQTQEARQGG---------------------QAQTYSTYVKRKD
        G +FFP+ IT LC       + E        D I + +       E    P+ +R      +R  G                     Q Q +  Y K +D
Subjt:  GKVFFPNTITILCNRVGVPTSLE--------DVILIDK-------EIIDTPNLARLQQTQEARQGG---------------------QAQTYSTYVKRKD

Query:  SMLRKALQSNFSKPYPSFPVFPNDLL
        + L+KALQ+NF++P P+FP FP ++L
Subjt:  SMLRKALQSNFSKPYPSFPVFPNDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGACGAGAGGTAGAAGAGAAAGGGATGTTGAAGAGGAAGAAGTGCCAGTGACACCTGAGGCATCGAAGAAGAAAACGAAGAGAAGAAAAACACGTGAAGAGAG
AGAGACCAAAAGATTGAGAAGGCAGCAACAGGTCGAAGTAATAAAGGAGCAAGGGAATGGTAAGGAAACTCAAGAACAACAGGTTCAGGGAGAAGTTGTGCCAGAGCCAC
CACATCGTCGCCACTGCAAGCAAAAGGACGACAAGGGCAAAGGAGTTGTTGAAGCAACAACCGAAGTAGAGGAGGCTGAGACTGAGGAACCAAGATTGCCATATGAGCGC
TTCGTCAACAACCTTACCAGAGCAAAATACTTGGACATTCTCAAGCGGGACTTTCTATTTGAAAGAGGATTTGGAGAAGACCTACCACATTTTCTTCGACCAGGGATCAC
AAATCATGGATGGGAGCAATTTTGTGCGAAGCCGGAGCCAATAAACTCAAATGTAGTCTCGCGTTCTACTCAAATATTGACGAAGAAGAAGGCTTCCAGTGAGATGGTGG
CAGCACCATCTAATGATCAGCTGAATGCAGGTGCTATGGAAGTTGGAATTGAAGGGGCTCAGTGGAGGTTGTCAAAGACAGAAAAACTCACTTTTCAAGCCGCCTATTTG
AAAAGCGAAGCAAACATCTGGTTGGGCTTCGTCAAAATGCGACTTCTGCCAACAACCCACAATTCTACAGTCTCCCGCGATCAAGTGCTCCTAGTTTTTGCAATTCTAAG
GTCTCTGAGTATCGATGTTCGTAAGGTGATTGCCAGTGAAATTCATACTTGTTGCTGCAAAAAGGTGGGTAAAGTCTTCTTTCCAAATACCATTACGATTCTATGTAATA
GGGTAGGGGTGCCCACAAGTCTAGAGGATGTGATTTTGATTGATAAGGAGATTATTGACACACCCAACCTAGCAAGGCTTCAACAGACTCAAGAAGCACGACAAGGAGGG
CAAGCTCAAACCTACTCGACTTATGTTAAGAGAAAGGATTCCATGTTAAGGAAGGCACTACAATCGAACTTTTCAAAGCCATATCCTTCCTTCCCAGTTTTTCCCAATGA
TCTGCTAAACCCCTGGATCCCACCGCCACCAGTCGAAAGAGAAGAAGAAGAACAGGATGATCTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGACGAGAGGTAGAAGAGAAAGGGATGTTGAAGAGGAAGAAGTGCCAGTGACACCTGAGGCATCGAAGAAGAAAACGAAGAGAAGAAAAACACGTGAAGAGAG
AGAGACCAAAAGATTGAGAAGGCAGCAACAGGTCGAAGTAATAAAGGAGCAAGGGAATGGTAAGGAAACTCAAGAACAACAGGTTCAGGGAGAAGTTGTGCCAGAGCCAC
CACATCGTCGCCACTGCAAGCAAAAGGACGACAAGGGCAAAGGAGTTGTTGAAGCAACAACCGAAGTAGAGGAGGCTGAGACTGAGGAACCAAGATTGCCATATGAGCGC
TTCGTCAACAACCTTACCAGAGCAAAATACTTGGACATTCTCAAGCGGGACTTTCTATTTGAAAGAGGATTTGGAGAAGACCTACCACATTTTCTTCGACCAGGGATCAC
AAATCATGGATGGGAGCAATTTTGTGCGAAGCCGGAGCCAATAAACTCAAATGTAGTCTCGCGTTCTACTCAAATATTGACGAAGAAGAAGGCTTCCAGTGAGATGGTGG
CAGCACCATCTAATGATCAGCTGAATGCAGGTGCTATGGAAGTTGGAATTGAAGGGGCTCAGTGGAGGTTGTCAAAGACAGAAAAACTCACTTTTCAAGCCGCCTATTTG
AAAAGCGAAGCAAACATCTGGTTGGGCTTCGTCAAAATGCGACTTCTGCCAACAACCCACAATTCTACAGTCTCCCGCGATCAAGTGCTCCTAGTTTTTGCAATTCTAAG
GTCTCTGAGTATCGATGTTCGTAAGGTGATTGCCAGTGAAATTCATACTTGTTGCTGCAAAAAGGTGGGTAAAGTCTTCTTTCCAAATACCATTACGATTCTATGTAATA
GGGTAGGGGTGCCCACAAGTCTAGAGGATGTGATTTTGATTGATAAGGAGATTATTGACACACCCAACCTAGCAAGGCTTCAACAGACTCAAGAAGCACGACAAGGAGGG
CAAGCTCAAACCTACTCGACTTATGTTAAGAGAAAGGATTCCATGTTAAGGAAGGCACTACAATCGAACTTTTCAAAGCCATATCCTTCCTTCCCAGTTTTTCCCAATGA
TCTGCTAAACCCCTGGATCCCACCGCCACCAGTCGAAAGAGAAGAAGAAGAACAGGATGATCTGGGTTAG
Protein sequenceShow/hide protein sequence
MAKTRGRRERDVEEEEVPVTPEASKKKTKRRKTREERETKRLRRQQQVEVIKEQGNGKETQEQQVQGEVVPEPPHRRHCKQKDDKGKGVVEATTEVEEAETEEPRLPYER
FVNNLTRAKYLDILKRDFLFERGFGEDLPHFLRPGITNHGWEQFCAKPEPINSNVVSRSTQILTKKKASSEMVAAPSNDQLNAGAMEVGIEGAQWRLSKTEKLTFQAAYL
KSEANIWLGFVKMRLLPTTHNSTVSRDQVLLVFAILRSLSIDVRKVIASEIHTCCCKKVGKVFFPNTITILCNRVGVPTSLEDVILIDKEIIDTPNLARLQQTQEARQGG
QAQTYSTYVKRKDSMLRKALQSNFSKPYPSFPVFPNDLLNPWIPPPPVEREEEEQDDLG