; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024404 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024404
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold9:24130623..24134925
RNA-Seq ExpressionSpg024404
SyntenySpg024404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]5.6e-1029.13Show/hide
Query:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS
        R+ Y  +V +    +E +  W    +  G        +    +V+T+R  HDDW +I++ + +QL+  +   PF  DK L+   + E  +L+  NKGW +
Subjt:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS

Query:  FDPIILKVEKWNKKKHNRITCVPNYGG
             +K E+WN+K H     +P+YGG
Subjt:  FDPIILKVEKWNKKKHNRITCVPNYGG

KAA0051807.1 hypothetical protein E6C27_scaffold60G002200 [Cucumis melo var. makuwa]2.5e-1032.8Show/hide
Query:  SVEEVVL----CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFD
        S +EVV+     +E S+ W    +  G       I+  + +V+T+R  HDDW  I++ +++QL+  +   PF  DK L+     E  +L+  NKGW +  
Subjt:  SVEEVVL----CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFD

Query:  PIILKVEKWNKKKHNRITCVPNYGG
           +K E+WN+K H     VP+YGG
Subjt:  PIILKVEKWNKKKHNRITCVPNYGG

TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]3.5e-1233.85Show/hide
Query:  HLRKKYTLSVEEVVL-CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKG
        HL +  T+  ++ VL  +  SRE + +    G       +D N+++V+T+R  HDDW +I++ ++ QL+ P+   PF  DK L+     E  +L+  NKG
Subjt:  HLRKKYTLSVEEVVL-CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKG

Query:  WVSFDPIILKVEKWNKKKHNRITCVPNYGG
        W +     +K E+WN+K H     VP+YGG
Subjt:  WVSFDPIILKVEKWNKKKHNRITCVPNYGG

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]5.6e-1029.13Show/hide
Query:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS
        R+ Y  +V +    +E +  W    +  G        +    +V+T+R  HDDW +I++ + +QL+  +   PF  DK L+   + E  +L+  NKGW +
Subjt:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS

Query:  FDPIILKVEKWNKKKHNRITCVPNYGG
             +K E+WN+K H     +P+YGG
Subjt:  FDPIILKVEKWNKKKHNRITCVPNYGG

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]8.3e-2251.58Show/hide
Query:  EEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFDPIILKVEKWNKKKHNRITCVPNYG
        EEVR+++  E +V+T+RD HDDW RIL  +++Q E   +INPFQ DK L+KCPS ++  LL TNKGWV+F P+ +K+E WN   H R    P+YG
Subjt:  EEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFDPIILKVEKWNKKKHNRITCVPNYG

TrEMBL top hitse value%identityAlignment
A0A5A7U495 DUF4283 domain-containing protein2.7e-1029.13Show/hide
Query:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS
        R+ Y  +V +    +E +  W    +  G        +    +V+T+R  HDDW +I++ + +QL+  +   PF  DK L+   + E  +L+  NKGW +
Subjt:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS

Query:  FDPIILKVEKWNKKKHNRITCVPNYGG
             +K E+WN+K H     +P+YGG
Subjt:  FDPIILKVEKWNKKKHNRITCVPNYGG

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 11.7e-1233.85Show/hide
Query:  HLRKKYTLSVEEVVL-CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKG
        HL +  T+  ++ VL  +  SRE + +    G       +D N+++V+T+R  HDDW +I++ ++ QL+ P+   PF  DK L+     E  +L+  NKG
Subjt:  HLRKKYTLSVEEVVL-CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKG

Query:  WVSFDPIILKVEKWNKKKHNRITCVPNYGG
        W +     +K E+WN+K H     VP+YGG
Subjt:  WVSFDPIILKVEKWNKKKHNRITCVPNYGG

A0A5D3CFS8 DUF4283 domain-containing protein2.7e-1029.13Show/hide
Query:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS
        R+ Y  +V +    +E +  W    +  G        +    +V+T+R  HDDW +I++ + +QL+  +   PF  DK L+   + E  +L+  NKGW +
Subjt:  RKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVS

Query:  FDPIILKVEKWNKKKHNRITCVPNYGG
             +K E+WN+K H     +P+YGG
Subjt:  FDPIILKVEKWNKKKHNRITCVPNYGG

A0A5D3DCX6 DUF4283 domain-containing protein1.2e-1032.8Show/hide
Query:  SVEEVVL----CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFD
        S +EVV+     +E S+ W    +  G       I+  + +V+T+R  HDDW  I++ +++QL+  +   PF  DK L+     E  +L+  NKGW +  
Subjt:  SVEEVVL----CEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFD

Query:  PIILKVEKWNKKKHNRITCVPNYGG
           +K E+WN+K H     VP+YGG
Subjt:  PIILKVEKWNKKKHNRITCVPNYGG

A0A6J1D6X4 uncharacterized protein LOC1110181864.0e-2251.58Show/hide
Query:  EEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFDPIILKVEKWNKKKHNRITCVPNYG
        EEVR+++  E +V+T+RD HDDW RIL  +++Q E   +INPFQ DK L+KCPS ++  LL TNKGWV+F P+ +K+E WN   H R    P+YG
Subjt:  EEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPFQPDKTLLKCPSTEMVDLLSTNKGWVSFDPIILKVEKWNKKKHNRITCVPNYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGGCAAGAAGCTGTAAAGTGAAGATAGAGAACAAATCTTTCTCGTGTAGCTTTGATAGAAACTATAAAGGAAGAGTGGTTAGAATCCAAGAAGAACACTTGAG
AAAGAAGTACACCCTGTCTGTCGAGGAAGTTGTCCTGTGTGAAGAAATATCCAGAGAGTGGAGAGACGTGAAAGAGTACAGAGGGAGCAAAGAAGAAGTTAGAAAGATTG
ACGGGAACGAGGTCTTAGTGGTTACAAAAAGAGATCTTCACGATGACTGGGGTCGTATCCTAGACATTATGCAACAGCAACTGGAAGAACCCCTCGTTATTAATCCTTTT
CAACCCGACAAGACCCTCCTTAAATGCCCCTCAACAGAAATGGTTGACTTGCTATCAACGAACAAAGGATGGGTCAGCTTCGACCCAATCATCTTAAAAGTTGAAAAGTG
GAACAAAAAGAAACATAACAGAATCACATGTGTACCCAACTATGGGGGTATGGATTCGAACCCACCCATGTCAAGCCCAGCCAGTAAAGAAACGGAAGATCTGGAAGAAG
AGAGACCAAATCCCTGCGAAGATAACGACGACGCGATCCTGGAAGGGTATCAACAATATTTTGCTGCCGGCAATGAATCTCACAGGGTTATTCAAAAGCAGGAGGAAGAA
AATAAGAAGTCCCCCCCCCCCTCCCCACATGAAACCAGAGTTGAAGAAAGAACTGAAGTGGAAGCGATCTGCTACCCACAAACTGGTACGATTTTTTTGGCTTCTTACAG
TACTAAGAAGGTGATTGAAGATACTCCAAAGGCCTTAGCTATTATCCAACCGACAAGAGAAGAGAATAATGATAAGAAAAAGGGATACTTTGAGGGGTTGAATCAGATTG
ATAGAAGGTTAGTGAAGTCCATTTGGAGCTCTAGGCACATTGCGTGGTTGGCTCTGAATGCTATTAATTCAGCAGGAGGGAAAGAAGTTAGTTCTTACAAGGGGGTTTGG
TGTATCACTGGTGACTTCAACATGATTAGATGGTCCAAAGAAAGGGTGGAGCTACACTGGGAAGCAACGCAACAAGGGTTGCAGGGAATGCAACAAATCTTGGAAAAAAT
GCAGAATCGGCTCAAGGAATTTGATCACCAAAAGATAGAGAGAGATCAGAAAAAGAAGGAAGATGACAATGTGAACTACAAACGGGCTGAGAAATTATTAGGTTGTAAGC
AAGGCCGAAGAGTAGCAGGGAGGTGTCGATCTTACGCAAAAGTACAGCCAGAAACGAGAGAGGAAGCAGTTCGAGAAAGTCCAAAAGTGTTTTCGGGTAAGGGATCATTG
AAAGAGTATGAGAAGATTGATCCTCAACTGGGGGAAGGGTGTATGAAGGGGAGAGAAAGAGGGCGAGGCCGGCGCAAGCAACATCAACGATGTAAGTTACACAGGAAAAA
TGGAAAAATCGAGGAGCAAAAATGGAAGGACAAGATTCCGGCGAATATAGCAAATGAGCAAGAATGCCGACAGCGGTGGAAGGCTAAAAGACGGAGGAGGAAAAGAAGGC
AGGGGAAACGGCTAGGGTTGCATTGCAGAAGTAACCCAATAATTGGGTATTGGTCAAATAGGCCCAATCAAGCCCAATATGATAAAATGGATAGGTATGCTGCTCTATGG
AGAAATTTTGGGTTTAATAATGGTGGGCTAGTACTTGGCTTGGGACAGCAAGTGAACCATGGGCTTAGCCCATCGAAGAAGAACAAGATTTGTTTTGAAGAACTTGCCCG
ATTGGGAGACATCAACTCTTGGAAAAACCCTACCCATGAGAAGCCACTCACCTCAACCACCATGGTGTTCTGTGCTGCAATCACGCCGCCAACCATCCCAATTGGACAAG
CTCATGTTGACTTCACTCACATCACTGGGCTGGTCTTGAATAAATTGGATAACAGGCCCAGTTGCAACATGATTTCTTTGGGCTGCATTGTTCTTGGTGCTTTGGGCTGC
ATTGTTCTTGGGTTGCACTCCAACAGCTGGCAAAATATGGCACCCATGGGCCCATGCTTCAGTGTTGCACACCGTCTCTTCCATACATCACCAACATTCGCCTCCTGCTC
TGTTTCTGCCAACCACAAGCCACAACACATGACTATTGAAGCGACTACTAGCTGGATTTTGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGATGGCAAGAAGCTGTAAAGTGAAGATAGAGAACAAATCTTTCTCGTGTAGCTTTGATAGAAACTATAAAGGAAGAGTGGTTAGAATCCAAGAAGAACACTTGAG
AAAGAAGTACACCCTGTCTGTCGAGGAAGTTGTCCTGTGTGAAGAAATATCCAGAGAGTGGAGAGACGTGAAAGAGTACAGAGGGAGCAAAGAAGAAGTTAGAAAGATTG
ACGGGAACGAGGTCTTAGTGGTTACAAAAAGAGATCTTCACGATGACTGGGGTCGTATCCTAGACATTATGCAACAGCAACTGGAAGAACCCCTCGTTATTAATCCTTTT
CAACCCGACAAGACCCTCCTTAAATGCCCCTCAACAGAAATGGTTGACTTGCTATCAACGAACAAAGGATGGGTCAGCTTCGACCCAATCATCTTAAAAGTTGAAAAGTG
GAACAAAAAGAAACATAACAGAATCACATGTGTACCCAACTATGGGGGTATGGATTCGAACCCACCCATGTCAAGCCCAGCCAGTAAAGAAACGGAAGATCTGGAAGAAG
AGAGACCAAATCCCTGCGAAGATAACGACGACGCGATCCTGGAAGGGTATCAACAATATTTTGCTGCCGGCAATGAATCTCACAGGGTTATTCAAAAGCAGGAGGAAGAA
AATAAGAAGTCCCCCCCCCCCTCCCCACATGAAACCAGAGTTGAAGAAAGAACTGAAGTGGAAGCGATCTGCTACCCACAAACTGGTACGATTTTTTTGGCTTCTTACAG
TACTAAGAAGGTGATTGAAGATACTCCAAAGGCCTTAGCTATTATCCAACCGACAAGAGAAGAGAATAATGATAAGAAAAAGGGATACTTTGAGGGGTTGAATCAGATTG
ATAGAAGGTTAGTGAAGTCCATTTGGAGCTCTAGGCACATTGCGTGGTTGGCTCTGAATGCTATTAATTCAGCAGGAGGGAAAGAAGTTAGTTCTTACAAGGGGGTTTGG
TGTATCACTGGTGACTTCAACATGATTAGATGGTCCAAAGAAAGGGTGGAGCTACACTGGGAAGCAACGCAACAAGGGTTGCAGGGAATGCAACAAATCTTGGAAAAAAT
GCAGAATCGGCTCAAGGAATTTGATCACCAAAAGATAGAGAGAGATCAGAAAAAGAAGGAAGATGACAATGTGAACTACAAACGGGCTGAGAAATTATTAGGTTGTAAGC
AAGGCCGAAGAGTAGCAGGGAGGTGTCGATCTTACGCAAAAGTACAGCCAGAAACGAGAGAGGAAGCAGTTCGAGAAAGTCCAAAAGTGTTTTCGGGTAAGGGATCATTG
AAAGAGTATGAGAAGATTGATCCTCAACTGGGGGAAGGGTGTATGAAGGGGAGAGAAAGAGGGCGAGGCCGGCGCAAGCAACATCAACGATGTAAGTTACACAGGAAAAA
TGGAAAAATCGAGGAGCAAAAATGGAAGGACAAGATTCCGGCGAATATAGCAAATGAGCAAGAATGCCGACAGCGGTGGAAGGCTAAAAGACGGAGGAGGAAAAGAAGGC
AGGGGAAACGGCTAGGGTTGCATTGCAGAAGTAACCCAATAATTGGGTATTGGTCAAATAGGCCCAATCAAGCCCAATATGATAAAATGGATAGGTATGCTGCTCTATGG
AGAAATTTTGGGTTTAATAATGGTGGGCTAGTACTTGGCTTGGGACAGCAAGTGAACCATGGGCTTAGCCCATCGAAGAAGAACAAGATTTGTTTTGAAGAACTTGCCCG
ATTGGGAGACATCAACTCTTGGAAAAACCCTACCCATGAGAAGCCACTCACCTCAACCACCATGGTGTTCTGTGCTGCAATCACGCCGCCAACCATCCCAATTGGACAAG
CTCATGTTGACTTCACTCACATCACTGGGCTGGTCTTGAATAAATTGGATAACAGGCCCAGTTGCAACATGATTTCTTTGGGCTGCATTGTTCTTGGTGCTTTGGGCTGC
ATTGTTCTTGGGTTGCACTCCAACAGCTGGCAAAATATGGCACCCATGGGCCCATGCTTCAGTGTTGCACACCGTCTCTTCCATACATCACCAACATTCGCCTCCTGCTC
TGTTTCTGCCAACCACAAGCCACAACACATGACTATTGAAGCGACTACTAGCTGGATTTTGTGTTAA
Protein sequenceShow/hide protein sequence
MTMARSCKVKIENKSFSCSFDRNYKGRVVRIQEEHLRKKYTLSVEEVVLCEEISREWRDVKEYRGSKEEVRKIDGNEVLVVTKRDLHDDWGRILDIMQQQLEEPLVINPF
QPDKTLLKCPSTEMVDLLSTNKGWVSFDPIILKVEKWNKKKHNRITCVPNYGGMDSNPPMSSPASKETEDLEEERPNPCEDNDDAILEGYQQYFAAGNESHRVIQKQEEE
NKKSPPPSPHETRVEERTEVEAICYPQTGTIFLASYSTKKVIEDTPKALAIIQPTREENNDKKKGYFEGLNQIDRRLVKSIWSSRHIAWLALNAINSAGGKEVSSYKGVW
CITGDFNMIRWSKERVELHWEATQQGLQGMQQILEKMQNRLKEFDHQKIERDQKKKEDDNVNYKRAEKLLGCKQGRRVAGRCRSYAKVQPETREEAVRESPKVFSGKGSL
KEYEKIDPQLGEGCMKGRERGRGRRKQHQRCKLHRKNGKIEEQKWKDKIPANIANEQECRQRWKAKRRRRKRRQGKRLGLHCRSNPIIGYWSNRPNQAQYDKMDRYAALW
RNFGFNNGGLVLGLGQQVNHGLSPSKKNKICFEELARLGDINSWKNPTHEKPLTSTTMVFCAAITPPTIPIGQAHVDFTHITGLVLNKLDNRPSCNMISLGCIVLGALGC
IVLGLHSNSWQNMAPMGPCFSVAHRLFHTSPTFASCSVSANHKPQHMTIEATTSWILC