; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024412 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024412
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold9:23779616..23781613
RNA-Seq ExpressionSpg024412
SyntenySpg024412
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]5.2e-1242.55Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDR-FSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFH
        +H+WNL+TF  +G++ GGFI+    +   IE  E  +K+KENY GF+PA + I D +   F +QIVT+ +G  L +R   IHGSF   A   F+
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDR-FSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFH

KAA0055618.1 hypothetical protein E6C27_scaffold222G001040 [Cucumis melo var. makuwa]6.1e-1341.94Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF
        +H+WN+ TF+ +G + GG I+           +EVKLKI+ NY GF+P  + I D K +RF++Q V++ +G  LI+R   +HG+F  QAT IF
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF

TYK01560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.8e-1252.94Show/hide
Query:  HLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQD
        HLWN   FK +GD L GFI Y   NS LI+CVEV +K+K NYCGF+P E ++ D  D F VQ+ + Q+
Subjt:  HLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQD

TYK23598.1 hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]8.9e-1238.71Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF
        +HLWN+ TF+ +G + GG I+           +E ++K++ NY GF+PA V I D + ++FS+Q+VT+ +G  LI+R   +HG+F  QA   F
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]2.6e-2746.77Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFHRGPTDPL
        +HLW+L TFKA+G++LGGFI+YD +NS  IEC +V +K+K NYCGFIPAE++  DG   F  ++V+++D   L  +   IHG FS +A   FH+G  +  
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFHRGPTDPL

Query:  FCLADIWRIENGKDYPVVKSLHPS
            D WR+ENG +YP V   +P+
Subjt:  FCLADIWRIENGKDYPVVKSLHPS

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein2.5e-1242.55Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDR-FSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFH
        +H+WNL+TF  +G++ GGFI+    +   IE  E  +K+KENY GF+PA + I D +   F +QIVT+ +G  L +R   IHGSF   A   F+
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDR-FSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFH

A0A5A7UKN2 DUF4283 domain-containing protein3.0e-1341.94Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF
        +H+WN+ TF+ +G + GG I+           +EVKLKI+ NY GF+P  + I D K +RF++Q V++ +G  LI+R   +HG+F  QAT IF
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF

A0A5D3BR42 LINE-1 retrotransposable element ORF2 protein3.3e-1252.94Show/hide
Query:  HLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQD
        HLWN   FK +GD L GFI Y   NS LI+CVEV +K+K NYCGF+P E ++ D  D F VQ+ + Q+
Subjt:  HLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQD

A0A5D3DJE1 DUF4283 domain-containing protein4.3e-1238.71Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF
        +HLWN+ TF+ +G + GG I+           +E ++K++ NY GF+PA V I D + ++FS+Q+VT+ +G  LI+R   +HG+F  QA   F
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGK-DRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIF

A0A6J1D6X4 uncharacterized protein LOC1110181861.2e-2746.77Show/hide
Query:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFHRGPTDPL
        +HLW+L TFKA+G++LGGFI+YD +NS  IEC +V +K+K NYCGFIPAE++  DG   F  ++V+++D   L  +   IHG FS +A   FH+G  +  
Subjt:  MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFHRGPTDPL

Query:  FCLADIWRIENGKDYPVVKSLHPS
            D WR+ENG +YP V   +P+
Subjt:  FCLADIWRIENGKDYPVVKSLHPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTATGGAACCTTCATACATTTAAAGCTTTAGGGGACAGCCTTGGAGGGTTCATTGAATACGATCTGTCGAACTCCCTGCTCATTGAATGTGTGGAAGTCAAGTT
GAAAATCAAGGAAAACTACTGTGGCTTCATCCCAGCAGAGGTGAATATCGAGGATGGAAAGGACCGTTTCAGCGTGCAAATCGTTACTTACCAAGATGGAAACATGCTGA
TAGATAGAACGACCGATATTCATGGTAGTTTTTCGCCGCAGGCAACTCACATCTTCCATAGAGGTCCGACGGATCCCCTCTTTTGCCTAGCAGATATTTGGAGGATTGAA
AACGGCAAGGATTACCCAGTGGTTAAAAGCCTTCATCCTTCTGATTCGGTAATGGTTAGTGACGGACAGCTGGAAGGCACAACAGCTAATTTCGAAATTTCCCGCTTAAA
ACTTAAAGGGAAAAGCTTTGATGAAGGCGGGCCCTCAAAGGTCGATGTCACGATAGCCCAATTTGAAGCCCAGCCCAATCTGGATAAGCCCGAATTAGAAGATGAAGAGT
GGATAGTTAAGCGGTCCAAAAAGAAAATTAAAAAAGGGGTTTCTTTTGCTAAAGAGGCCCAAGTTTCCGTTTTTAAAAAGGGAGAGGTCCACTCCACTAAGAAAAGAAAT
AGCCCACAAAGGTCGTATGAAGAGGTGGAAGTCTGGAATAGGGAGCAAGGCACCGAATCAGAGATATCCTTTTCTAGTCCAACCAGCAAAGAAAGTGACAGCGGGAAAGA
AGAGAGAGCTCGTTGCGCGGGGGATTCAGATAATGATTTCCCAGAAGGTTGCCAGTTATGCTTCTCTAATGATTTCGATCAAGAAAGAGGATCTATGCCTAACAGCGTGG
AAGCCACGGCTGAGACAGCGGTTGAAGCGGCCGAGGAAGGTAGCGATAGTTTGAAAGTCATTCAGAATTCTCCCTCCGAGGCTTTGCCCTCCAGAAAAGTCAGCCACAAA
GATCACCAGCCGATTTCCCCAAAAGCTCTTGCTATGATTCCGCCTAGGAATAGTGAGAAAACTCAAGCAGAGGGCGATAAAGGAGAGCTTATTCTGAGTAAAGAGTTTAT
TCACACCCTCAGAAAGAATAATCTTTGTATAAGGCCGATAGTTGGGTCGAATGTTAAGAAAGGCAATTCTACTAAAAAAAGGCGCAGCAGAGAAGTGACCAACCTCCTTA
GATCTTGGGAGAAAGAAGTTGAGCCGATTATAGAATCCGACAAGGAGAATGATAGCTTTACCAGCCAGCAAGGCACCGAATCAGAGATATCCTTTTCTAGTCCAGCCAGC
AAAGAAAGTGACAGCGGGAAAGAAGAGAGAGCTCGTTGCGCGGGGGATTCAGATAATGATTTCCCAGAAGGTTACCAGTTATGCTTCTCTAATGATTTCGATCAAGAAAG
AGGATCTATGCCTAACAACATGGAAGCCACGGCTGAGACAGCGGTTGAAGCGGCCGAGGAAGGTAGCGATAGTTTGAAAGTCATTCAGAATTCTCCCTCCGAGGCTTTGC
CCTCCAGAAAAGTCAGCCACGAAGATCACCTGCCGATTTCCCCAAAAGCTCTTGCTATGATTCCGCCTAGGAATAGTGAGAAAACTCAAGCAGAGGGCAATAAAGGAGAG
CTTATTCTGAGTAAAGAGTTTATTCACACCCTCAGAAAGAATAATCTTTGTATAAGGCCGATAGTTGGGTCGAATGTTAAGAAAGGCAATTCTACTAAAAAAAGGCGCAG
CAGAGAAGTGACCAACCTCCTTAGATCTTGGGAGAAAGAAGTTGAGCCGATTATAGAATCCGACAAGGAGAATGATAGCTTTGTAGATGGTTTAAGTAGTTCGAAAAGGG
CAGATGCGGTTTCCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTATGGAACCTTCATACATTTAAAGCTTTAGGGGACAGCCTTGGAGGGTTCATTGAATACGATCTGTCGAACTCCCTGCTCATTGAATGTGTGGAAGTCAAGTT
GAAAATCAAGGAAAACTACTGTGGCTTCATCCCAGCAGAGGTGAATATCGAGGATGGAAAGGACCGTTTCAGCGTGCAAATCGTTACTTACCAAGATGGAAACATGCTGA
TAGATAGAACGACCGATATTCATGGTAGTTTTTCGCCGCAGGCAACTCACATCTTCCATAGAGGTCCGACGGATCCCCTCTTTTGCCTAGCAGATATTTGGAGGATTGAA
AACGGCAAGGATTACCCAGTGGTTAAAAGCCTTCATCCTTCTGATTCGGTAATGGTTAGTGACGGACAGCTGGAAGGCACAACAGCTAATTTCGAAATTTCCCGCTTAAA
ACTTAAAGGGAAAAGCTTTGATGAAGGCGGGCCCTCAAAGGTCGATGTCACGATAGCCCAATTTGAAGCCCAGCCCAATCTGGATAAGCCCGAATTAGAAGATGAAGAGT
GGATAGTTAAGCGGTCCAAAAAGAAAATTAAAAAAGGGGTTTCTTTTGCTAAAGAGGCCCAAGTTTCCGTTTTTAAAAAGGGAGAGGTCCACTCCACTAAGAAAAGAAAT
AGCCCACAAAGGTCGTATGAAGAGGTGGAAGTCTGGAATAGGGAGCAAGGCACCGAATCAGAGATATCCTTTTCTAGTCCAACCAGCAAAGAAAGTGACAGCGGGAAAGA
AGAGAGAGCTCGTTGCGCGGGGGATTCAGATAATGATTTCCCAGAAGGTTGCCAGTTATGCTTCTCTAATGATTTCGATCAAGAAAGAGGATCTATGCCTAACAGCGTGG
AAGCCACGGCTGAGACAGCGGTTGAAGCGGCCGAGGAAGGTAGCGATAGTTTGAAAGTCATTCAGAATTCTCCCTCCGAGGCTTTGCCCTCCAGAAAAGTCAGCCACAAA
GATCACCAGCCGATTTCCCCAAAAGCTCTTGCTATGATTCCGCCTAGGAATAGTGAGAAAACTCAAGCAGAGGGCGATAAAGGAGAGCTTATTCTGAGTAAAGAGTTTAT
TCACACCCTCAGAAAGAATAATCTTTGTATAAGGCCGATAGTTGGGTCGAATGTTAAGAAAGGCAATTCTACTAAAAAAAGGCGCAGCAGAGAAGTGACCAACCTCCTTA
GATCTTGGGAGAAAGAAGTTGAGCCGATTATAGAATCCGACAAGGAGAATGATAGCTTTACCAGCCAGCAAGGCACCGAATCAGAGATATCCTTTTCTAGTCCAGCCAGC
AAAGAAAGTGACAGCGGGAAAGAAGAGAGAGCTCGTTGCGCGGGGGATTCAGATAATGATTTCCCAGAAGGTTACCAGTTATGCTTCTCTAATGATTTCGATCAAGAAAG
AGGATCTATGCCTAACAACATGGAAGCCACGGCTGAGACAGCGGTTGAAGCGGCCGAGGAAGGTAGCGATAGTTTGAAAGTCATTCAGAATTCTCCCTCCGAGGCTTTGC
CCTCCAGAAAAGTCAGCCACGAAGATCACCTGCCGATTTCCCCAAAAGCTCTTGCTATGATTCCGCCTAGGAATAGTGAGAAAACTCAAGCAGAGGGCAATAAAGGAGAG
CTTATTCTGAGTAAAGAGTTTATTCACACCCTCAGAAAGAATAATCTTTGTATAAGGCCGATAGTTGGGTCGAATGTTAAGAAAGGCAATTCTACTAAAAAAAGGCGCAG
CAGAGAAGTGACCAACCTCCTTAGATCTTGGGAGAAAGAAGTTGAGCCGATTATAGAATCCGACAAGGAGAATGATAGCTTTGTAGATGGTTTAAGTAGTTCGAAAAGGG
CAGATGCGGTTTCCTTATGA
Protein sequenceShow/hide protein sequence
MHLWNLHTFKALGDSLGGFIEYDLSNSLLIECVEVKLKIKENYCGFIPAEVNIEDGKDRFSVQIVTYQDGNMLIDRTTDIHGSFSPQATHIFHRGPTDPLFCLADIWRIE
NGKDYPVVKSLHPSDSVMVSDGQLEGTTANFEISRLKLKGKSFDEGGPSKVDVTIAQFEAQPNLDKPELEDEEWIVKRSKKKIKKGVSFAKEAQVSVFKKGEVHSTKKRN
SPQRSYEEVEVWNREQGTESEISFSSPTSKESDSGKEERARCAGDSDNDFPEGCQLCFSNDFDQERGSMPNSVEATAETAVEAAEEGSDSLKVIQNSPSEALPSRKVSHK
DHQPISPKALAMIPPRNSEKTQAEGDKGELILSKEFIHTLRKNNLCIRPIVGSNVKKGNSTKKRRSREVTNLLRSWEKEVEPIIESDKENDSFTSQQGTESEISFSSPAS
KESDSGKEERARCAGDSDNDFPEGYQLCFSNDFDQERGSMPNNMEATAETAVEAAEEGSDSLKVIQNSPSEALPSRKVSHEDHLPISPKALAMIPPRNSEKTQAEGNKGE
LILSKEFIHTLRKNNLCIRPIVGSNVKKGNSTKKRRSREVTNLLRSWEKEVEPIIESDKENDSFVDGLSSSKRADAVSL