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Spg024416 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024416
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionproline-rich proteoglycan 2-like
Genome locationscaffold9:24103111..24103665
RNA-Seq ExpressionSpg024416
SyntenySpg024416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7882823.1 unnamed protein product [Brassica rapa]1.1e-1538Show/hide
Query:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN
        +KRLVP GPN+   P +PPH+I    + R    G                FG KRLVP GPN+   P +PPH+I    +            KRLVP GPN
Subjt:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN

Query:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
        +   P +PPH+I               G KRLVP GPN+   P +PPH+I
Subjt:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

RID71831.1 hypothetical protein BRARA_C03751 [Brassica rapa]1.1e-1538Show/hide
Query:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN
        +KRLVP GPN+   P +PPH+I    + R    G                FG KRLVP GPN+   P +PPH+I    +            KRLVP GPN
Subjt:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN

Query:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
        +   P +PPH+I               G KRLVP GPN+   P +PPH+I
Subjt:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

VDC94000.1 unnamed protein product [Brassica oleracea]3.5e-1742.65Show/hide
Query:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHNIVT
        +KRLVP GPN+   P +PPH+IV             FG KRLVP GPN+   P +PPH I    +            KRLVP GPN+   P +PPH I  
Subjt:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHNIVT

Query:  MSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
          + R     L +G KRLVP GPN+   P +PPH I
Subjt:  MSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

XP_022159163.1 proline-rich proteoglycan 2-like [Momordica charantia]1.0e-1635.04Show/hide
Query:  MGLLSKVDMFHVFFMFSFVAMVLDVTNVEGKRDESSDELILSLKRLVPGGPNHAFPPGTPPHTI--------------------VTKSIAR---------
        MG LSK +M  VF   SFVA++ D   VE +RD + D L L LKR VP GPN A  P  PP T+                    +T  + R         
Subjt:  MGLLSKVDMFHVFFMFSFVAMVLDVTNVEGKRDESSDELILSLKRLVPGGPNHAFPPGTPPHTI--------------------VTKSIAR---------

Query:  --DEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGG-----------LALSSKRLVPGGPNHAFPPGTPPHNIVTMSIAR-----------
           E     FG KR VP GPN A  P  PP   FT S+ R    G              S KR VP GPN A  P  PP    T+ + R           
Subjt:  --DEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGG-----------LALSSKRLVPGGPNHAFPPGTPPHNIVTMSIAR-----------

Query:  DDIDELVLGPKRLVPGGPNHAFPPGTPPHNIIMK
         +   + LG KR VP GPN A  P  PP  + +K
Subjt:  DDIDELVLGPKRLVPGGPNHAFPPGTPPHNIIMK

XP_022932063.1 uncharacterized protein LOC111438388 [Cucurbita moschata]7.5e-2848.05Show/hide
Query:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARD--------EIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFP
        L  KRLVP GPN  FPP TP H + +K +  D        E   H  GSKRLVP GPN  FPP TP HN+ +  +  D   G  L SKRLVPGGPN  F 
Subjt:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARD--------EIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFP

Query:  PGTPPHNIVTMSIARDDIDELV--------LGPKRLVPGGPNHAFPPGTPPHNI
        P TP HN+ +  +  D  +++         LG KRLVPGGPN  FPP TP HN+
Subjt:  PGTPPHNIVTMSIARDDIDELV--------LGPKRLVPGGPNHAFPPGTPPHNI

TrEMBL top hitse value%identityAlignment
A0A398A230 Uncharacterized protein5.4e-1638Show/hide
Query:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN
        +KRLVP GPN+   P +PPH+I    + R    G                FG KRLVP GPN+   P +PPH+I    +            KRLVP GPN
Subjt:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDG--------------HAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPN

Query:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
        +   P +PPH+I               G KRLVP GPN+   P +PPH+I
Subjt:  HAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

A0A3P6B7Y9 Uncharacterized protein1.7e-1742.65Show/hide
Query:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHNIVT
        +KRLVP GPN+   P +PPH+IV             FG KRLVP GPN+   P +PPH I    +            KRLVP GPN+   P +PPH I  
Subjt:  LKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHNIVT

Query:  MSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
          + R     L +G KRLVP GPN+   P +PPH I
Subjt:  MSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

A0A6J1DY20 proline-rich proteoglycan 2-like4.9e-1735.04Show/hide
Query:  MGLLSKVDMFHVFFMFSFVAMVLDVTNVEGKRDESSDELILSLKRLVPGGPNHAFPPGTPPHTI--------------------VTKSIAR---------
        MG LSK +M  VF   SFVA++ D   VE +RD + D L L LKR VP GPN A  P  PP T+                    +T  + R         
Subjt:  MGLLSKVDMFHVFFMFSFVAMVLDVTNVEGKRDESSDELILSLKRLVPGGPNHAFPPGTPPHTI--------------------VTKSIAR---------

Query:  --DEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGG-----------LALSSKRLVPGGPNHAFPPGTPPHNIVTMSIAR-----------
           E     FG KR VP GPN A  P  PP   FT S+ R    G              S KR VP GPN A  P  PP    T+ + R           
Subjt:  --DEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGG-----------LALSSKRLVPGGPNHAFPPGTPPHNIVTMSIAR-----------

Query:  DDIDELVLGPKRLVPGGPNHAFPPGTPPHNIIMK
         +   + LG KR VP GPN A  P  PP  + +K
Subjt:  DDIDELVLGPKRLVPGGPNHAFPPGTPPHNIIMK

A0A6J1F0K6 uncharacterized protein LOC1114383883.6e-2848.05Show/hide
Query:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARD--------EIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFP
        L  KRLVP GPN  FPP TP H + +K +  D        E   H  GSKRLVP GPN  FPP TP HN+ +  +  D   G  L SKRLVPGGPN  F 
Subjt:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARD--------EIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFP

Query:  PGTPPHNIVTMSIARDDIDELV--------LGPKRLVPGGPNHAFPPGTPPHNI
        P TP HN+ +  +  D  +++         LG KRLVPGGPN  FPP TP HN+
Subjt:  PGTPPHNIVTMSIARDDIDELV--------LGPKRLVPGGPNHAFPPGTPPHNI

M4D9I0 Uncharacterized protein1.4e-1640.29Show/hide
Query:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHA-FGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHN
        + +KRLVP GPN+   P +PPH I  ++         A FG KRLVP GPN+   P +PPH+I    +            KRLVP GPN+   P +PPH+
Subjt:  LSLKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHA-FGSKRLVPGGPNHAFPPGTPPHNIFTNSIARDDTGGLALSSKRLVPGGPNHAFPPGTPPHN

Query:  IVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI
        I               G KRLVP GPN+   P +PPH+I
Subjt:  IVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTACTTTCAAAGGTTGACATGTTCCATGTTTTCTTCATGTTTTCTTTTGTTGCTATGGTATTAGATGTAACAAATGTGGAGGGAAAGAGAGATGAAAGTAGTGA
TGAACTTATTTTGAGTCTCAAAAGACTTGTTCCTGGAGGACCAAATCATGCGTTTCCTCCCGGAACTCCTCCTCACACTATTGTTACGAAATCAATAGCAAGAGATGAAA
TTGACGGACATGCTTTTGGTTCCAAGAGACTTGTTCCAGGAGGGCCAAATCACGCTTTCCCTCCTGGAACTCCTCCTCACAACATCTTTACGAACTCAATAGCAAGAGAT
GACACTGGTGGACTTGCCTTGAGTTCCAAGAGACTTGTCCCAGGGGGACCAAATCACGCTTTTCCTCCTGGAACTCCTCCTCACAACATTGTTACAATGTCAATAGCAAG
AGATGACATTGATGAGCTTGTTTTAGGTCCTAAGAGACTTGTTCCGGGGGGGCCAAATCATGCTTTCCCTCCTGGAACTCCTCCTCACAACATTATTATGAAGCCAATAT
CTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTACTTTCAAAGGTTGACATGTTCCATGTTTTCTTCATGTTTTCTTTTGTTGCTATGGTATTAGATGTAACAAATGTGGAGGGAAAGAGAGATGAAAGTAGTGA
TGAACTTATTTTGAGTCTCAAAAGACTTGTTCCTGGAGGACCAAATCATGCGTTTCCTCCCGGAACTCCTCCTCACACTATTGTTACGAAATCAATAGCAAGAGATGAAA
TTGACGGACATGCTTTTGGTTCCAAGAGACTTGTTCCAGGAGGGCCAAATCACGCTTTCCCTCCTGGAACTCCTCCTCACAACATCTTTACGAACTCAATAGCAAGAGAT
GACACTGGTGGACTTGCCTTGAGTTCCAAGAGACTTGTCCCAGGGGGACCAAATCACGCTTTTCCTCCTGGAACTCCTCCTCACAACATTGTTACAATGTCAATAGCAAG
AGATGACATTGATGAGCTTGTTTTAGGTCCTAAGAGACTTGTTCCGGGGGGGCCAAATCATGCTTTCCCTCCTGGAACTCCTCCTCACAACATTATTATGAAGCCAATAT
CTTAA
Protein sequenceShow/hide protein sequence
MGLLSKVDMFHVFFMFSFVAMVLDVTNVEGKRDESSDELILSLKRLVPGGPNHAFPPGTPPHTIVTKSIARDEIDGHAFGSKRLVPGGPNHAFPPGTPPHNIFTNSIARD
DTGGLALSSKRLVPGGPNHAFPPGTPPHNIVTMSIARDDIDELVLGPKRLVPGGPNHAFPPGTPPHNIIMKPIS