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Spg024458 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024458
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:17171913..17173262
RNA-Seq ExpressionSpg024458
SyntenySpg024458
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036245.1 hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1253.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
XP_022930901.1 uncharacterized protein LOC111437254 isoform X1 [Cucurbita moschata]1.7e-1253.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
XP_022930902.1 uncharacterized protein LOC111437254 isoform X2 [Cucurbita moschata]1.7e-1253.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
XP_022996266.1 uncharacterized protein LOC111491544 [Cucurbita maxima]1.7e-1253.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
XP_023532570.1 uncharacterized protein LOC111794692 [Cucurbita pepo subsp. pepo]1.7e-1253.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
TrEMBL top hitse value%identityAlignment
A0A6A6K714 Uncharacterized protein4.2e-1268.42Show/hide
Query:  EDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGIWMVEQTWKQK
        +D+DEDE E+ EGQLCCLQALKFS GKMNLGMGRPNLVK+SKA +G   +    K+K
Subjt:  EDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGIWMVEQTWKQK
A0A6J1ERY4 uncharacterized protein LOC111437254 isoform X28.4e-1353.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
A0A6J1ES68 uncharacterized protein LOC111437254 isoform X18.4e-1353.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
A0A6J1K488 uncharacterized protein LOC1114915448.4e-1353.61Show/hide
Query:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
        + + ET E+ E  W   ++ EKI             EEDEDEDE+EDREGQLCCLQALKFS GKMNLGMGRPNLVKMSKA +G  W+     +++ +
Subjt:  EQIEETTEERENQWEIEEREEKI-------------EEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI-WMVEQTWKQKEI
V7B544 Uncharacterized protein3.5e-1176Show/hide
Query:  EKIEEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEG
        EK E++E+E+E ED EG+LCCLQALKFSTGKMNLGMGRPNL+K SKA +G
Subjt:  EKIEEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25130.1 unknown protein9.5e-0947.22Show/hide
Query:  EEQIEETTEERENQWEIEEREEKIEEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI
        EE+ ++  ++ ++  + +  E+++  +E++D+  D + QLCCLQALKFSTGKM+LG+ RPNL+K+SKAF+GI
Subjt:  EEQIEETTEERENQWEIEEREEKIEEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTATGGGCGATGCAGTTCGCAGAGACGAAGGAACATTCGAAATGCCATCGTGTGATTGGCCAAGGAACAAAAGGGATGGATTCGTTGTGGGAGACATACGAGA
AGAGCAAATCGAAGAAACTACAGAAGAACGAGAAAATCAATGGGAAATCGAAGAAAGGGAAGAAAAAATCGAAGAAGATGAAGATGAAGATGAATTTGAAGATCGAGAAG
GGCAACTGTGCTGTTTACAGGCTCTGAAATTCTCGACGGGGAAGATGAATTTGGGAATGGGGAGACCGAATCTTGTGAAAATGTCGAAAGCTTTTGAAGGGATTTGGATG
GTTGAGCAGACATGGAAGCAGAAAGAGATCGATCCATTGATGAATTATTTTACGGGTTGTTTGGCCCTTGGGTTTGGAATGGGAATGGATTGGAATGGCATGGGGTTCCC
ACGTTTGGCCCATGGGTTTGGGCTTGGAATGATGATTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTATGGGCGATGCAGTTCGCAGAGACGAAGGAACATTCGAAATGCCATCGTGTGATTGGCCAAGGAACAAAAGGGATGGATTCGTTGTGGGAGACATACGAGA
AGAGCAAATCGAAGAAACTACAGAAGAACGAGAAAATCAATGGGAAATCGAAGAAAGGGAAGAAAAAATCGAAGAAGATGAAGATGAAGATGAATTTGAAGATCGAGAAG
GGCAACTGTGCTGTTTACAGGCTCTGAAATTCTCGACGGGGAAGATGAATTTGGGAATGGGGAGACCGAATCTTGTGAAAATGTCGAAAGCTTTTGAAGGGATTTGGATG
GTTGAGCAGACATGGAAGCAGAAAGAGATCGATCCATTGATGAATTATTTTACGGGTTGTTTGGCCCTTGGGTTTGGAATGGGAATGGATTGGAATGGCATGGGGTTCCC
ACGTTTGGCCCATGGGTTTGGGCTTGGAATGATGATTCCCATTTGA
Protein sequenceShow/hide protein sequence
MTSMGDAVRRDEGTFEMPSCDWPRNKRDGFVVGDIREEQIEETTEERENQWEIEEREEKIEEDEDEDEFEDREGQLCCLQALKFSTGKMNLGMGRPNLVKMSKAFEGIWM
VEQTWKQKEIDPLMNYFTGCLALGFGMGMDWNGMGFPRLAHGFGLGMMIPI