; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024475 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024475
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold12:17132244..17134958
RNA-Seq ExpressionSpg024475
SyntenySpg024475
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]4.5e-3655.47Show/hide
Query:  MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRT
        +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY  +++I +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR+T
Subjt:  MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRT

Query:  VRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        VRIPSAGE    +QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  VRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]7.7e-3658.09Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        +V +G  D  VDL+  TC+CREF+Y++IPCSH IAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W    EF  + + PPK V RVGRR T 
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        RIPS GE    +Q  KCGRCG  GHNRKTC EPL+T
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]8.2e-3857.66Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +YAEPIYP+G   +W  P +F E  I PPK VARVGRR+TV
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]2.4e-3755.8Show/hide
Query:  RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRR
        ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY  +++I +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR+
Subjt:  RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRR

Query:  TVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  TVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]9.1e-3759.56Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        +V +G LD  VDL+   C+CREF+Y++IPCSHAIAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W    EF  + + PPK V RVGRR+TV
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        RIPS GE    +Q  KCGRCG  GHNRKTC EPL+T
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

TrEMBL top hitse value%identityAlignment
A0A6J1DK28 uncharacterized protein LOC1110207872.2e-3655.47Show/hide
Query:  MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRT
        +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY  +++I +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR+T
Subjt:  MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRT

Query:  VRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        VRIPSAGE    +QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  VRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DK35 uncharacterized protein LOC1110218333.7e-3658.09Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        +V +G  D  VDL+  TC+CREF+Y++IPCSH IAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W    EF  + + PPK V RVGRR T 
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        RIPS GE    +Q  KCGRCG  GHNRKTC EPL+T
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DQV1 uncharacterized protein LOC1110222994.0e-3857.66Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +YAEPIYP+G   +W  P +F E  I PPK VARVGRR+TV
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DRF6 uncharacterized protein LOC1110236641.2e-3755.8Show/hide
Query:  RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRR
        ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY  +++I +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR+
Subjt:  RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRR

Query:  TVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  TVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DYC4 uncharacterized protein LOC1110256784.4e-3759.56Show/hide
Query:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV
        +V +G LD  VDL+   C+CREF+Y++IPCSHAIAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W    EF  + + PPK V RVGRR+TV
Subjt:  EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTV

Query:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST
        RIPS GE    +Q  KCGRCG  GHNRKTC EPL+T
Subjt:  RIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase4.9e-0431.94Show/hide
Query:  TCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPP
        +CTC +F+ Y+ PC HA+A  +    N +      Y  E +  +YA     V  MS W  P       +LPP
Subjt:  TCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPP

AT1G64260.1 MuDR family transposase4.7e-0731.25Show/hide
Query:  VDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKR
        V L++ TCTCR+F+ Y+ PC HA+A      +N +      Y  E    +YA    PV  ++ W  P + +   + PP +
Subjt:  VDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTAATGCCTCGAATCTTTGTGTGTTACGG
TGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGA
GTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTA
AGCGGAGAGGATGCATCTAAATTGTCGTTATACTTATCAATGATTCCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTC
ACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCTGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTAT
CATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAAT
TACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGA
GGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGAAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACT
TTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGTC
ACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGA
GATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAAAACAACAAGTTCATAAGTGCGGTC
GATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTAATGCCTCGAATCTTTGTGTGTTACGG
TGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGA
GTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTA
AGCGGAGAGGATGCATCTAAATTGTCGTTATACTTATCAATGATTCCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTC
ACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCTGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTAT
CATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAAT
TACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGA
GGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGAAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACT
TTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGTC
ACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGA
GATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAAAACAACAAGTTCATAAGTGCGGTC
GATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
Protein sequenceShow/hide protein sequence
MMNPDRDFLVKRPGFPGREIHQEIFQILMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSDINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFL
SGEDASKLSLYLSMIPKDVHGSGSNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLN
YEEQEYDEEEDENWEYNEEDEELDESYEEESEADEFEEVDGVEADGGTDGGNEVEKDVAPLASRMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVV
TLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT