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Spg024480 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024480
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed DNA polymerase
Genome locationscaffold12:18221404..18222863
RNA-Seq ExpressionSpg024480
SyntenySpg024480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]6.8e-1655.43Show/hide
Query:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP
        +Q+  SNLE +MKEYMAR DA +       RN   QLG +A E+KNRPQG+ P  TE P +EGKEQ KAVTLRS L YDGP  P   + +IP
Subjt:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]4.0e-1656.52Show/hide
Query:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP
        +Q+  SNLE +MKEYMAR DA +       RN E QLGQ+A E+KNRPQG+ P  TE P +EGKEQ KAVTLRS L YD P  P   + +IP
Subjt:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]3.8e-1463.89Show/hide
Query:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS
        SQ S+LE+LM++YMA+NDA +       RNLEVQLGQ+A ++KNRPQGTLPS TE P ++GKE  KAVTLRS
Subjt:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]4.9e-1462.5Show/hide
Query:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS
        SQ S+LE+LM++YMA+NDA +       RNLEVQLGQ+A ++KNRPQGTLPS TE P ++GKE  KA+TLRS
Subjt:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]3.8e-1463.89Show/hide
Query:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS
        SQ S+LE+LM++YMA+NDA +       RNLEVQLGQ+A ++KNRPQGTLPS TE P ++GKE  KAVTLRS
Subjt:  SQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRS

TrEMBL top hitse value%identityAlignment
A0A6J1DAE9 uncharacterized protein LOC1110185143.8e-1249.44Show/hide
Query:  SQESNLETLMKEYMARND--------------AAVRNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYP
        +  ++LE + KEYMARND              A +RNLEVQ+GQ A ++K RPQG+ P  TE   ++G EQ KAVTLRS L Y+GPK P
Subjt:  SQESNLETLMKEYMARND--------------AAVRNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYP

A0A6J1DW02 uncharacterized protein LOC1110248973.3e-1655.43Show/hide
Query:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP
        +Q+  SNLE +MKEYMAR DA +       RN   QLG +A E+KNRPQG+ P  TE P +EGKEQ KAVTLRS L YDGP  P   + +IP
Subjt:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP

A0A6J1DYG0 uncharacterized protein LOC1110257641.9e-1656.52Show/hide
Query:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP
        +Q+  SNLE +MKEYMAR DA +       RN E QLGQ+A E+KNRPQG+ P  TE P +EGKEQ KAVTLRS L YD P  P   + +IP
Subjt:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIP

A0A6J1DZC3 uncharacterized protein LOC1110244495.3e-1448.89Show/hide
Query:  MQSQESNLETLMKEYMARNDAAVRNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIPVEARE
        MQ   +  +T +++Y +RNDAA+RNLE Q+GQ+A E+KNRP+GTLPS TE P  EG+E  K +T RS L Y+ PK P  + +  P + +E
Subjt:  MQSQESNLETLMKEYMARNDAAVRNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYPGNQEAEIPVEARE

A0A6J1E110 uncharacterized protein LOC1110254241.0e-1254.76Show/hide
Query:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYP
        +Q+  SNLE  MKEYMAR DA +       RN E QLG +A  +KNRPQG+    TE P  EGKE  KAVTLRS L YD P  P
Subjt:  MQSQESNLETLMKEYMARNDAAV-------RNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLRSVLEYDGPKYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCCAGATCAAGGCCATCCATAACATGATGATGGGCATGTCCATGAAGAATCAAGCCAATATAGCCCCTGCCAATGCTGTTTCTTCTCTTTGTTGTGAGATATG
TGGTGAGGAACACATCGCTGATATGCAGAGTCAAGAGTCCAATCTAGAGACTCTTATGAAGGAGTACATGGCAAGGAACGATGCTGCAGTAAGGAATTTGGAAGTTCAGC
TTGGACAAATTGCTCAGGAGATTAAGAATAGACCTCAAGGTACGTTGCCTAGTAAGACCGAGACTCCGCACAAGGAAGGAAAGGAACAATACAAGGCAGTGACCCTAAGA
AGTGTATTAGAATACGATGGACCAAAGTATCCAGGAAATCAAGAAGCAGAGATCCCAGTTGAAGCTCGAGAGAAGATTTATGGTTTGCCTATGGATGATGTGAATTTTGA
TCCTGATGAGTTCTTTGACGCTGCCATGTTTGAAAATGAGTTGTTGAATGATGTTGAGATGCCTGTTGTAAATGTTTATGAGTATAATTTGCCTACATTGAATCTAGAAG
AGCATGTATTAGATGTCATTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCCAGATCAAGGCCATCCATAACATGATGATGGGCATGTCCATGAAGAATCAAGCCAATATAGCCCCTGCCAATGCTGTTTCTTCTCTTTGTTGTGAGATATG
TGGTGAGGAACACATCGCTGATATGCAGAGTCAAGAGTCCAATCTAGAGACTCTTATGAAGGAGTACATGGCAAGGAACGATGCTGCAGTAAGGAATTTGGAAGTTCAGC
TTGGACAAATTGCTCAGGAGATTAAGAATAGACCTCAAGGTACGTTGCCTAGTAAGACCGAGACTCCGCACAAGGAAGGAAAGGAACAATACAAGGCAGTGACCCTAAGA
AGTGTATTAGAATACGATGGACCAAAGTATCCAGGAAATCAAGAAGCAGAGATCCCAGTTGAAGCTCGAGAGAAGATTTATGGTTTGCCTATGGATGATGTGAATTTTGA
TCCTGATGAGTTCTTTGACGCTGCCATGTTTGAAAATGAGTTGTTGAATGATGTTGAGATGCCTGTTGTAAATGTTTATGAGTATAATTTGCCTACATTGAATCTAGAAG
AGCATGTATTAGATGTCATTTTTTAG
Protein sequenceShow/hide protein sequence
MQAQIKAIHNMMMGMSMKNQANIAPANAVSSLCCEICGEEHIADMQSQESNLETLMKEYMARNDAAVRNLEVQLGQIAQEIKNRPQGTLPSKTETPHKEGKEQYKAVTLR
SVLEYDGPKYPGNQEAEIPVEAREKIYGLPMDDVNFDPDEFFDAAMFENELLNDVEMPVVNVYEYNLPTLNLEEHVLDVIF