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Spg024490 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024490
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:16433166..16434154
RNA-Seq ExpressionSpg024490
SyntenySpg024490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]2.3e-0430.43Show/hide
Query:  EAMVPLVREFYAGLREESMSMAVVRGRIVSFSSVDINKVYQIKAPLHPRGNDAIKNPSTKQLKEALKMVVNKGFQWKEPTIDLALIQKLQLN
        + M+ +VR FY G   ++    +++G  V FS+ DIN++Y++K  L   GN  I +P    +++ L++++  G QW   ++ L +I+ L  N
Subjt:  EAMVPLVREFYAGLREESMSMAVVRGRIVSFSSVDINKVYQIKAPLHPRGNDAIKNPSTKQLKEALKMVVNKGFQWKEPTIDLALIQKLQLN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGCACCTCCTACCTCCACACCTGTCAAACCGAAGATCAAATCGCCTAAAGCTCCATCACCAAAGAATCTGTTCCCTAAAGTCATCAAGGATGTTAA
TTTCCAGGAGAGAATGGAGATTGTGAGAAAAAGAGACTTCTTGAACGAGAAGGGATTCTCAAACAGAGTAGGGACTTTGTCAGACTTTGAGGCCATGGTGCCTCTAGTTC
GAGAATTTTATGCTGGATTGAGGGAGGAGAGCATGAGCATGGCGGTGGTGAGAGGTAGAATAGTCAGTTTCTCTTCGGTTGATATCAACAAGGTGTACCAGATTAAGGCA
CCTTTGCATCCAAGAGGCAATGATGCAATCAAGAACCCCTCGACCAAACAGTTGAAAGAAGCATTGAAGATGGTGGTCAACAAGGGATTTCAGTGGAAGGAGCCCACCAT
TGACCTAGCTCTAATACAGAAGCTTCAACTGAACAATGCGCAAAGAAAGGACAAGGCTTCCACATCCCAAGCTATTCCACCTCCAGGGCTGAATCCTGTTTCACCTCCTC
AGCACACTCTTGTTCCAGGGCCTAACACCATCATCAGAGGCCCTTGCATTTTCCTTCTGACAGCTAGACCGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGCACCTCCTACCTCCACACCTGTCAAACCGAAGATCAAATCGCCTAAAGCTCCATCACCAAAGAATCTGTTCCCTAAAGTCATCAAGGATGTTAA
TTTCCAGGAGAGAATGGAGATTGTGAGAAAAAGAGACTTCTTGAACGAGAAGGGATTCTCAAACAGAGTAGGGACTTTGTCAGACTTTGAGGCCATGGTGCCTCTAGTTC
GAGAATTTTATGCTGGATTGAGGGAGGAGAGCATGAGCATGGCGGTGGTGAGAGGTAGAATAGTCAGTTTCTCTTCGGTTGATATCAACAAGGTGTACCAGATTAAGGCA
CCTTTGCATCCAAGAGGCAATGATGCAATCAAGAACCCCTCGACCAAACAGTTGAAAGAAGCATTGAAGATGGTGGTCAACAAGGGATTTCAGTGGAAGGAGCCCACCAT
TGACCTAGCTCTAATACAGAAGCTTCAACTGAACAATGCGCAAAGAAAGGACAAGGCTTCCACATCCCAAGCTATTCCACCTCCAGGGCTGAATCCTGTTTCACCTCCTC
AGCACACTCTTGTTCCAGGGCCTAACACCATCATCAGAGGCCCTTGCATTTTCCTTCTGACAGCTAGACCGGATTGA
Protein sequenceShow/hide protein sequence
MDASPAPPTSTPVKPKIKSPKAPSPKNLFPKVIKDVNFQERMEIVRKRDFLNEKGFSNRVGTLSDFEAMVPLVREFYAGLREESMSMAVVRGRIVSFSSVDINKVYQIKA
PLHPRGNDAIKNPSTKQLKEALKMVVNKGFQWKEPTIDLALIQKLQLNNAQRKDKASTSQAIPPPGLNPVSPPQHTLVPGPNTIIRGPCIFLLTARPD