; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024495 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024495
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposable element Tf2
Genome locationscaffold12:15649960..15655405
RNA-Seq ExpressionSpg024495
SyntenySpg024495
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032923.1 polyprotein [Cucumis melo var. makuwa]5.7e-10046.92Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG         SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S         ASPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]3.7e-9945.72Show/hide
Query:  SRGRASSSRGSRPSSSSTAPPPMSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTY
        S    + S+G +PS+ S+AP  MSA+ YAMDL F  V  SR  QG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+Y
Subjt:  SRGRASSSRGSRPSSSSTAPPPMSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTY

Query:  SAAVTPEKRFVPRPEIKGYFQKSQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKA
        S  V P K F PRP I GYF K+ ++ +  IEPEF G ++ E  + ++P  FNF+PEDL KT TFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ 
Subjt:  SAAVTPEKRFVPRPEIKGYFQKSQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKA

Query:  LNPTHWNQGLYTDKSFSKPFVPQTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHN
        L P++W QG++  + FS PF P +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    
Subjt:  LNPTHWNQGLYTDKSFSKPFVPQTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHN

Query:  SMRFCLYFQIPWIFCWNFSTSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAA
        + RF LYFQIPWIFCWNF       +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++    
Subjt:  SMRFCLYFQIPWIFCWNFSTSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAA

Query:  SDRS---------ASPASSAQGEEENEDP--DYDLDDPFLDSQP
         +RS         ASPAS    ++ + DP    D++DPFLD+QP
Subjt:  SDRS---------ASPASSAQGEEENEDP--DYDLDDPFLDSQP

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.3e-9946.68Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S          SPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]5.7e-10046.68Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S          SPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]9.7e-10046.92Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG         SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S         ASPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein2.7e-10046.92Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG         SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S         ASPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

A0A5A7U3G5 Polyprotein1.8e-9945.72Show/hide
Query:  SRGRASSSRGSRPSSSSTAPPPMSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTY
        S    + S+G +PS+ S+AP  MSA+ YAMDL F  V  SR  QG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+Y
Subjt:  SRGRASSSRGSRPSSSSTAPPPMSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTY

Query:  SAAVTPEKRFVPRPEIKGYFQKSQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKA
        S  V P K F PRP I GYF K+ ++ +  IEPEF G ++ E  + ++P  FNF+PEDL KT TFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ 
Subjt:  SAAVTPEKRFVPRPEIKGYFQKSQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKA

Query:  LNPTHWNQGLYTDKSFSKPFVPQTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHN
        L P++W QG++  + FS PF P +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    
Subjt:  LNPTHWNQGLYTDKSFSKPFVPQTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHN

Query:  SMRFCLYFQIPWIFCWNFSTSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAA
        + RF LYFQIPWIFCWNF       +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++    
Subjt:  SMRFCLYFQIPWIFCWNFSTSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAA

Query:  SDRS---------ASPASSAQGEEENEDP--DYDLDDPFLDSQP
         +RS         ASPAS    ++ + DP    D++DPFLD+QP
Subjt:  SDRS---------ASPASSAQGEEENEDP--DYDLDDPFLDSQP

A0A5A7UVN1 Retrotransposable element Tf26.1e-10046.68Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S          SPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

A0A5A7V6D1 Retrotransposable element Tf22.7e-10046.68Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG     +   SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L+IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S          SPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

A0A5D3DW87 Polyprotein4.7e-10046.92Show/hide
Query:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK
        MSA+ YAMDL F  V  SR RQG  +    +  +SS+ PP PS  L+RPSG         SP +S+  S+IP + S+YS  V P K F PRP I GYF K
Subjt:  MSADQYAMDLGFTTVTQSRSRQGGIRPMPPM--ESSTPPPRPSANLVRPSGGIIQLRPPVSP-SSAIGSSIP-SSSTYSAAVTPEKRFVPRPEIKGYFQK

Query:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP
        + ++ +  IEPEF G +++E  S ++P GFNF+PEDL+KTRTFYE+ILVD+KSAEITH+PDKNDPSKI YSKL+IF+ L P++W QG++  + FS PF P
Subjt:  SQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFVP

Query:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN
         +Y+YRDY +AWY + W     HSWF++FC+ AYK+ FP WF  WW  FGL+ +I P  +Q SY+ F ++I  +    + RF LYFQIPWIFCWNF    
Subjt:  QTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSN

Query:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG
           +K ++K L IKWW+KFN+ +  +NK+K+WF AN +LQD+  + +  FL  K+ +++ LA  ++  +F  ++     + S         ASPAS    
Subjt:  QPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS---------ASPASSAQG

Query:  EEENEDP--DYDLDDPFLDSQP
        ++ + DP    D++DPFLD+QP
Subjt:  EEENEDP--DYDLDDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAAGTAGAGGCAGAGCCTCCTCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCCACAGCACCTCCACCTATGAGTGCTGACCAATACGCTATGGATTTAGGGTT
TACTACGGTAACCCAATCCAGATCTAGGCAAGGCGGAATACGCCCTATGCCCCCAATGGAGTCATCAACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCAG
GCGGAATCATTCAATTGAGACCTCCTGTCTCTCCTTCTTCAGCAATAGGATCATCGATCCCGTCCTCTTCAACATACTCTGCGGCTGTAACGCCTGAAAAGAGGTTTGTA
CCTCGCCCAGAGATCAAAGGTTACTTTCAAAAATCGCAGGTTATCTATGAACCCATCATAGAGCCTGAATTTCAGGGTCTCAACCTAGAAGAGACCATTTCAAACATGTA
TCCTACAGGTTTCAATTTCATGCCTGAGGATTTAAACAAAACAAGAACCTTCTATGAGTTTATCCTAGTTGACACCAAGTCAGCTGAGATAACCCATATTCCTGACAAAA
ACGATCCCTCTAAGATCGCTTATTCAAAACTAAAGATCTTCAAAGCCTTGAATCCAACCCACTGGAATCAAGGATTATATACAGACAAATCATTTTCAAAACCCTTTGTT
CCACAAACATATTCATATCGGGACTACGTTAGAGCCTGGTATAATATGATGTGGTATTCACCCTCCAAACATTCTTGGTTCATTTCTTTCTGCCAGAATGCTTACAAAAT
CACATTCCCATTGTGGTTCATTCAATGGTGGAATACATTCGGTCTTACGAATGATATTTTGCCTACTCCCTTGCAAGAGTCATATTATCATTTTGCAAGGAATATTCAAA
AAACAGCATTTCATAACTCTATGAGATTCTGTTTATATTTCCAAATTCCTTGGATATTTTGCTGGAACTTCTCAACCAGCAACCAACCTCAGTACAAAACCGTCACGAAG
ATCCTAAAGATCAAATGGTGGGACAAATTCAATTTCCAGAACGCCACCCTTAATAAGGTAAAGGAGTGGTTCGCAGCCAATGGTTATCTTCAAGATATCGACATAAAGAG
GAACGCAGAGTTTCTCAATGACAAATCAAAGCTCTTAGCAGCTCTTGCACAGACGACATCTGATGCAGACTTCCAAAGGATTCTACAGATGGCGGCTTCAGATAGAAGCG
CATCCCCAGCTTCTTCTGCACAAGGAGAAGAAGAAAATGAAGATCCGGATTACGATCTGGACGACCCGTTTCTCGACTCACAACCTATCCTACAAGATATGGAATCTTAT
CTTCTGAAAAGAGATAAAGCTGAAGCATCTTCAACAGTTTTAAAACCTATCTTCGACGAAGAGATCGTCAGAAGCTATTTACGTTCATCTACTCCGAAGGACTGTTGCGA
AGGACTGTTGCGGTTGGTGGTCCCGGTCGTAAGACGCAAAGAAGAGCGCAGTGAATCCGTTGGTCAGCCTACCTTGCCTTCTTGCCAAAAGACTTCCTCTAAGGAGCTAA
CTCAAAATGAAATTGAGGACCAGCATATGGCCTCATCAGGCTCTGACATCTCTAATGAAGCTTTGCATATAGCAAAGATCGAAAACAACCTTCAAGCCTGGGGTCTACCC
AAACTTGACAACAAAACAATCTATATGCATAATACGTTCAATTTCAAAGAGCAACACTGCATCAAGATTGTTGAACGCAAAATTCCAGTCTATGGGAATATTGATTCAAT
TCAATTATTTCCAAAAGACGATATCCTCAAGCACCGAAAGGATTTTCAGTTCCTTCATATAGGAGCAGTTCAAGTCGCTCTCCGTCCAATGTTCAGAATGGCACTGGTCC
AATCCCCAAAGGGAAAAACCATGCTGATCGAAACAAACATCAATAAATCCTCTGTAAGTGTCCCAAAGATGCTTTCATGGGATAACCTCACAAGAAATCCTAGATGGACA
ATCGAAAATGCTTTTGTCCCGAATAAGAAAGAAAAAGAACTTTCCCATATTATCGAACATCCAGATGGGAGAGTAGAAATCAAATTTGAGGATGAAGAACCTCGTTTCCC
AGTGGTCAAAGAAAACATGAACAAAAAGGAGTTTATGAGTTCTAGACCAAGTACCTCTGGCATTAGGCCAGAATCTCTTCAAAGTATTGGCAGAACTAGCTCACTCAGAG
TTAAGTCTGTAAGACTAGAACACGGAGTTCCAAATCTCCAATATGAAGAAGAAAGACCTCCTTCTCCAACCCAAACCGATATGGAAACCGAATCAGTTTTCAAAAGCCAA
CTGAACGTTATCATTGCTGATAACGAATTCAAAGTTGACAAAGAAGCTCTGCAAACGGAGTTTATGGCCAAAGAAAACAGAGAAGAAAGAAAACGCTTCTTTAAGACTCA
CTCTGAAGAACAGAGAAAAGTTATTAAAGAAGAATACTTTCAAACTCTTGAAAAGCTTCAAGAACATATTTCCTTTTTCAGATGGTTCAATCAGAGAAAAGAATATTCTC
ACATATGCGCCATAAGAGAAAAAGAAAAATGGAAAACAATGAGGCGAGGAGAAGTTCAAGGAAACTTCCCTCCAATGGAAGATGTTGAGTTCGACAGTTTTTACCATGAA
AAAATTGTCGCAAAACCCTTTCAACTCATTAGAGAAGCTGAAGAGGCTCAACCTCCTACCAATAAAGAAATCAAAAGCATTCAGGTCCAAAACAATTTCTCGAACCGAAT
GCTAACCTTCATAGCTGAACAAGTTTACCGGCTAGAGGAATTAATCGATCCTCCTCCAGCACCTATCAAACCCATGTTCAGCCCTCTTGAACAAGTCAATCTCAGGACGC
CAAAGACTAAACTCTTGGAAGAGATTGATAGAAAGCTTTCTGCCATAGCAAGAGGAGAAAGCTCAAGTCAGATAAATGTTTTGAATGATAGTGACAGTGATGAAACTGAT
TCTATTATTGAACAATTATCTGGCCTCCAAATTGAAGAGCCTCAATCCCTTAGGCCCCGAGATCGTGTGAACTGGTATCAAAGACCCTCGATGCCAGACCTCAATTACGA
ACAAAGTCACAAGTTCGTCAAAACCAAACAATTTGACGGTCAATCTATTGTTGTTTGGAACCTTGATGGAAAGTCCGATAGACAGATTCAAGATATGCTGTCAGAAATGC
TCATAGCATCAACAGCATACCAAGAAAATGGGAATTCAAACCATGTAGCCTGTGTAACCTTAATCAATGGTTTTACAGGTGTCCTTAAGGCATGGTGGGACTGCCTCAGT
ACTTCTCTCAAATTAGAAATCAAGCTACATACTACAAAGGTCAAGAGAAAAAGAGAGATTTCTGATACAAAGGCAGACCCAGGTATAAGGATAGGTGGAGAACCTATCAC
TAAACCTGAAACCTCTAAAACCCCTCCAAAGGTAGTTGTCATAGAAGAAGAGGTAGACCAGCAAGATGCCGTTGAGGCATTAATTTATGCTATCTCTTGGGCCTTCACAA
CTGCTCACAATGTGAAGCATGACGATACCCAAAGAACCATTCTCAAAAACCTCAGGTACTTGGAGAAGACAAAGATTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAAGTAGAGGCAGAGCCTCCTCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCCACAGCACCTCCACCTATGAGTGCTGACCAATACGCTATGGATTTAGGGTT
TACTACGGTAACCCAATCCAGATCTAGGCAAGGCGGAATACGCCCTATGCCCCCAATGGAGTCATCAACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCAG
GCGGAATCATTCAATTGAGACCTCCTGTCTCTCCTTCTTCAGCAATAGGATCATCGATCCCGTCCTCTTCAACATACTCTGCGGCTGTAACGCCTGAAAAGAGGTTTGTA
CCTCGCCCAGAGATCAAAGGTTACTTTCAAAAATCGCAGGTTATCTATGAACCCATCATAGAGCCTGAATTTCAGGGTCTCAACCTAGAAGAGACCATTTCAAACATGTA
TCCTACAGGTTTCAATTTCATGCCTGAGGATTTAAACAAAACAAGAACCTTCTATGAGTTTATCCTAGTTGACACCAAGTCAGCTGAGATAACCCATATTCCTGACAAAA
ACGATCCCTCTAAGATCGCTTATTCAAAACTAAAGATCTTCAAAGCCTTGAATCCAACCCACTGGAATCAAGGATTATATACAGACAAATCATTTTCAAAACCCTTTGTT
CCACAAACATATTCATATCGGGACTACGTTAGAGCCTGGTATAATATGATGTGGTATTCACCCTCCAAACATTCTTGGTTCATTTCTTTCTGCCAGAATGCTTACAAAAT
CACATTCCCATTGTGGTTCATTCAATGGTGGAATACATTCGGTCTTACGAATGATATTTTGCCTACTCCCTTGCAAGAGTCATATTATCATTTTGCAAGGAATATTCAAA
AAACAGCATTTCATAACTCTATGAGATTCTGTTTATATTTCCAAATTCCTTGGATATTTTGCTGGAACTTCTCAACCAGCAACCAACCTCAGTACAAAACCGTCACGAAG
ATCCTAAAGATCAAATGGTGGGACAAATTCAATTTCCAGAACGCCACCCTTAATAAGGTAAAGGAGTGGTTCGCAGCCAATGGTTATCTTCAAGATATCGACATAAAGAG
GAACGCAGAGTTTCTCAATGACAAATCAAAGCTCTTAGCAGCTCTTGCACAGACGACATCTGATGCAGACTTCCAAAGGATTCTACAGATGGCGGCTTCAGATAGAAGCG
CATCCCCAGCTTCTTCTGCACAAGGAGAAGAAGAAAATGAAGATCCGGATTACGATCTGGACGACCCGTTTCTCGACTCACAACCTATCCTACAAGATATGGAATCTTAT
CTTCTGAAAAGAGATAAAGCTGAAGCATCTTCAACAGTTTTAAAACCTATCTTCGACGAAGAGATCGTCAGAAGCTATTTACGTTCATCTACTCCGAAGGACTGTTGCGA
AGGACTGTTGCGGTTGGTGGTCCCGGTCGTAAGACGCAAAGAAGAGCGCAGTGAATCCGTTGGTCAGCCTACCTTGCCTTCTTGCCAAAAGACTTCCTCTAAGGAGCTAA
CTCAAAATGAAATTGAGGACCAGCATATGGCCTCATCAGGCTCTGACATCTCTAATGAAGCTTTGCATATAGCAAAGATCGAAAACAACCTTCAAGCCTGGGGTCTACCC
AAACTTGACAACAAAACAATCTATATGCATAATACGTTCAATTTCAAAGAGCAACACTGCATCAAGATTGTTGAACGCAAAATTCCAGTCTATGGGAATATTGATTCAAT
TCAATTATTTCCAAAAGACGATATCCTCAAGCACCGAAAGGATTTTCAGTTCCTTCATATAGGAGCAGTTCAAGTCGCTCTCCGTCCAATGTTCAGAATGGCACTGGTCC
AATCCCCAAAGGGAAAAACCATGCTGATCGAAACAAACATCAATAAATCCTCTGTAAGTGTCCCAAAGATGCTTTCATGGGATAACCTCACAAGAAATCCTAGATGGACA
ATCGAAAATGCTTTTGTCCCGAATAAGAAAGAAAAAGAACTTTCCCATATTATCGAACATCCAGATGGGAGAGTAGAAATCAAATTTGAGGATGAAGAACCTCGTTTCCC
AGTGGTCAAAGAAAACATGAACAAAAAGGAGTTTATGAGTTCTAGACCAAGTACCTCTGGCATTAGGCCAGAATCTCTTCAAAGTATTGGCAGAACTAGCTCACTCAGAG
TTAAGTCTGTAAGACTAGAACACGGAGTTCCAAATCTCCAATATGAAGAAGAAAGACCTCCTTCTCCAACCCAAACCGATATGGAAACCGAATCAGTTTTCAAAAGCCAA
CTGAACGTTATCATTGCTGATAACGAATTCAAAGTTGACAAAGAAGCTCTGCAAACGGAGTTTATGGCCAAAGAAAACAGAGAAGAAAGAAAACGCTTCTTTAAGACTCA
CTCTGAAGAACAGAGAAAAGTTATTAAAGAAGAATACTTTCAAACTCTTGAAAAGCTTCAAGAACATATTTCCTTTTTCAGATGGTTCAATCAGAGAAAAGAATATTCTC
ACATATGCGCCATAAGAGAAAAAGAAAAATGGAAAACAATGAGGCGAGGAGAAGTTCAAGGAAACTTCCCTCCAATGGAAGATGTTGAGTTCGACAGTTTTTACCATGAA
AAAATTGTCGCAAAACCCTTTCAACTCATTAGAGAAGCTGAAGAGGCTCAACCTCCTACCAATAAAGAAATCAAAAGCATTCAGGTCCAAAACAATTTCTCGAACCGAAT
GCTAACCTTCATAGCTGAACAAGTTTACCGGCTAGAGGAATTAATCGATCCTCCTCCAGCACCTATCAAACCCATGTTCAGCCCTCTTGAACAAGTCAATCTCAGGACGC
CAAAGACTAAACTCTTGGAAGAGATTGATAGAAAGCTTTCTGCCATAGCAAGAGGAGAAAGCTCAAGTCAGATAAATGTTTTGAATGATAGTGACAGTGATGAAACTGAT
TCTATTATTGAACAATTATCTGGCCTCCAAATTGAAGAGCCTCAATCCCTTAGGCCCCGAGATCGTGTGAACTGGTATCAAAGACCCTCGATGCCAGACCTCAATTACGA
ACAAAGTCACAAGTTCGTCAAAACCAAACAATTTGACGGTCAATCTATTGTTGTTTGGAACCTTGATGGAAAGTCCGATAGACAGATTCAAGATATGCTGTCAGAAATGC
TCATAGCATCAACAGCATACCAAGAAAATGGGAATTCAAACCATGTAGCCTGTGTAACCTTAATCAATGGTTTTACAGGTGTCCTTAAGGCATGGTGGGACTGCCTCAGT
ACTTCTCTCAAATTAGAAATCAAGCTACATACTACAAAGGTCAAGAGAAAAAGAGAGATTTCTGATACAAAGGCAGACCCAGGTATAAGGATAGGTGGAGAACCTATCAC
TAAACCTGAAACCTCTAAAACCCCTCCAAAGGTAGTTGTCATAGAAGAAGAGGTAGACCAGCAAGATGCCGTTGAGGCATTAATTTATGCTATCTCTTGGGCCTTCACAA
CTGCTCACAATGTGAAGCATGACGATACCCAAAGAACCATTCTCAAAAACCTCAGGTACTTGGAGAAGACAAAGATTGCTTAA
Protein sequenceShow/hide protein sequence
MSESRGRASSSRGSRPSSSSTAPPPMSADQYAMDLGFTTVTQSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIIQLRPPVSPSSAIGSSIPSSSTYSAAVTPEKRFV
PRPEIKGYFQKSQVIYEPIIEPEFQGLNLEETISNMYPTGFNFMPEDLNKTRTFYEFILVDTKSAEITHIPDKNDPSKIAYSKLKIFKALNPTHWNQGLYTDKSFSKPFV
PQTYSYRDYVRAWYNMMWYSPSKHSWFISFCQNAYKITFPLWFIQWWNTFGLTNDILPTPLQESYYHFARNIQKTAFHNSMRFCLYFQIPWIFCWNFSTSNQPQYKTVTK
ILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSASPASSAQGEEENEDPDYDLDDPFLDSQPILQDMESY
LLKRDKAEASSTVLKPIFDEEIVRSYLRSSTPKDCCEGLLRLVVPVVRRKEERSESVGQPTLPSCQKTSSKELTQNEIEDQHMASSGSDISNEALHIAKIENNLQAWGLP
KLDNKTIYMHNTFNFKEQHCIKIVERKIPVYGNIDSIQLFPKDDILKHRKDFQFLHIGAVQVALRPMFRMALVQSPKGKTMLIETNINKSSVSVPKMLSWDNLTRNPRWT
IENAFVPNKKEKELSHIIEHPDGRVEIKFEDEEPRFPVVKENMNKKEFMSSRPSTSGIRPESLQSIGRTSSLRVKSVRLEHGVPNLQYEEERPPSPTQTDMETESVFKSQ
LNVIIADNEFKVDKEALQTEFMAKENREERKRFFKTHSEEQRKVIKEEYFQTLEKLQEHISFFRWFNQRKEYSHICAIREKEKWKTMRRGEVQGNFPPMEDVEFDSFYHE
KIVAKPFQLIREAEEAQPPTNKEIKSIQVQNNFSNRMLTFIAEQVYRLEELIDPPPAPIKPMFSPLEQVNLRTPKTKLLEEIDRKLSAIARGESSSQINVLNDSDSDETD
SIIEQLSGLQIEEPQSLRPRDRVNWYQRPSMPDLNYEQSHKFVKTKQFDGQSIVVWNLDGKSDRQIQDMLSEMLIASTAYQENGNSNHVACVTLINGFTGVLKAWWDCLS
TSLKLEIKLHTTKVKRKREISDTKADPGIRIGGEPITKPETSKTPPKVVVIEEEVDQQDAVEALIYAISWAFTTAHNVKHDDTQRTILKNLRYLEKTKIA