; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024496 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024496
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntracellular protein transporter
Genome locationscaffold12:17145311..17153073
RNA-Seq ExpressionSpg024496
SyntenySpg024496
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035622.1 hypothetical protein SDJN02_02420 [Cucurbita argyrosperma subsp. argyrosperma]6.9e-6082.24Show/hide
Query:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD
        LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGNVKSSDRRKAAGCRCSNVYSFTR 
Subjt:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD

Query:  DECSFNCMPGERRVLLHESFGRGFSSCHSSSSLDWEKVVADGAMMLTIVVAL
        DEC FNCMPGERRVLLHES GRGF    S   +   KV  D AMMLT V+AL
Subjt:  DECSFNCMPGERRVLLHESFGRGFSSCHSSSSLDWEKVVADGAMMLTIVVAL

XP_022958465.1 uncharacterized protein LOC111459684 isoform X1 [Cucurbita moschata]2.5e-4990.18Show/hide
Query:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT
        K LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGNVKSSDRRKAAGCRCSNVYSFT
Subjt:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT

Query:  RDDECSFNCMPG
        R DEC FNCMPG
Subjt:  RDDECSFNCMPG

XP_022995208.1 uncharacterized protein LOC111490822 isoform X1 [Cucurbita maxima]1.1e-4990.18Show/hide
Query:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT
        K LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGN KSSDRRKAAGCRCSNVYSFT
Subjt:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT

Query:  RDDECSFNCMPG
        RDDEC FNCMPG
Subjt:  RDDECSFNCMPG

XP_022995209.1 uncharacterized protein LOC111490822 isoform X2 [Cucurbita maxima]3.2e-4990.91Show/hide
Query:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD
        LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGN KSSDRRKAAGCRCSNVYSFTRD
Subjt:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD

Query:  DECSFNCMPG
        DEC FNCMPG
Subjt:  DECSFNCMPG

XP_023533472.1 uncharacterized protein LOC111795347 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-4987.07Show/hide
Query:  VVNVKRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNV
        ++  K LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGNVKSSDRRKAAGCRCSNV
Subjt:  VVNVKRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNV

Query:  YSFTRDDECSFNCMPG
        YSFTR DEC FNCMPG
Subjt:  YSFTRDDECSFNCMPG

TrEMBL top hitse value%identityAlignment
A0A6J1DYH8 uncharacterized protein LOC111025735 isoform X12.5e-4788.18Show/hide
Query:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD
        LN+LG  +TL DPKM+PRTSRGPRAQKSR SSNEGPNWVLIAGGALLSTLSIRLGY+LKQAFDT+QLKDSG+SL GNVKSSDRRKAAGCRCSNVYSFTRD
Subjt:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD

Query:  DECSFNCMPG
        DEC FNC+PG
Subjt:  DECSFNCMPG

A0A6J1H251 uncharacterized protein LOC111459684 isoform X23.5e-4990.91Show/hide
Query:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD
        LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGNVKSSDRRKAAGCRCSNVYSFTR 
Subjt:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD

Query:  DECSFNCMPG
        DEC FNCMPG
Subjt:  DECSFNCMPG

A0A6J1H3I1 uncharacterized protein LOC111459684 isoform X11.2e-4990.18Show/hide
Query:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT
        K LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGNVKSSDRRKAAGCRCSNVYSFT
Subjt:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT

Query:  RDDECSFNCMPG
        R DEC FNCMPG
Subjt:  RDDECSFNCMPG

A0A6J1K528 uncharacterized protein LOC111490822 isoform X21.6e-4990.91Show/hide
Query:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD
        LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGN KSSDRRKAAGCRCSNVYSFTRD
Subjt:  LNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTRD

Query:  DECSFNCMPG
        DEC FNCMPG
Subjt:  DECSFNCMPG

A0A6J1K787 uncharacterized protein LOC111490822 isoform X15.4e-5090.18Show/hide
Query:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT
        K LN LG SSTLLDPKM+PRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLS+RLGY+LKQ FDT+QLKDSG+SLTGN KSSDRRKAAGCRCSNVYSFT
Subjt:  KRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFT

Query:  RDDECSFNCMPG
        RDDEC FNCMPG
Subjt:  RDDECSFNCMPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27610.1 unknown protein6.8e-1342.57Show/hide
Query:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR
        MS R +   + Q+      EGPNW+LIAGGALLSTLSIR GY+LKQ+ D+K   +    L  N  S  ++  + C  S   S T+ +D C F  +PG   
Subjt:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR

Query:  V
        V
Subjt:  V

AT4G27610.2 unknown protein6.8e-1342.57Show/hide
Query:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR
        MS R +   + Q+      EGPNW+LIAGGALLSTLSIR GY+LKQ+ D+K   +    L  N  S  ++  + C  S   S T+ +D C F  +PG   
Subjt:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR

Query:  V
        V
Subjt:  V

AT4G27610.3 unknown protein6.8e-1342.57Show/hide
Query:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR
        MS R +   + Q+      EGPNW+LIAGGALLSTLSIR GY+LKQ+ D+K   +    L  N  S  ++  + C  S   S T+ +D C F  +PG   
Subjt:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKAAGCRCSNVYSFTR-DDECSFNCMPGERR

Query:  V
        V
Subjt:  V

AT4G27620.1 unknown protein6.1e-1445Show/hide
Query:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVK---SSDRRKAAGCRC-SNVYSFTRDDECSFNCMPG
        M+ R +   R Q+      EGPNW+LIAGGALLSTLSIR GY+LKQ+ D+   K   ++ TG +K   ++DR +  GC   SN     R+++C F+C PG
Subjt:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVK---SSDRRKAAGCRC-SNVYSFTRDDECSFNCMPG

AT4G27620.2 unknown protein6.1e-1445Show/hide
Query:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVK---SSDRRKAAGCRC-SNVYSFTRDDECSFNCMPG
        M+ R +   R Q+      EGPNW+LIAGGALLSTLSIR GY+LKQ+ D+   K   ++ TG +K   ++DR +  GC   SN     R+++C F+C PG
Subjt:  MSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVK---SSDRRKAAGCRC-SNVYSFTRDDECSFNCMPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCTGCTCAAAACCGAGGATAATAGAACAGTTTGTTTTGTTGGCTGTTTGTCAATGCAATGTGCCACTTGAAAACAGCAAGCAGAAAAGACTCGAGACTCCTAG
TTGGGTTGGGCTGATTGAGATCATCGATACTATTAGCTTGGGTGGAGGCAGAGATGTTCCTTTATGGAGTCTTGAGAAATCCGGGATTTTCTCCTCCAAATCGGCCTTCT
TGAAACTATCAGATTCTTCCCCATCCCTCACGACCCCGTTGATCGACGCCATCAGGAAGAACCACACCCCAAAGAAGGTTAAGGTTTTTCTTTGGTCCCTTGCCCATAGA
AGCCTTAACACTTCAGACCTTCTTCAAAAAAAGTGTAGAAATAGAATGCTCTCTCCTTTGGTGTGCCCCCTGTGCTGGGCTAATTCGGAATCCCTTGACCATCTTTTCCT
TCGTTGCCCTTTTGCTTTTGCGGGTTGGAGGTGGCTGCTGGGGGAATTCAACCTCTCCATTTCCTTGCCTGATAATATAGATGTGTGGTTGGATGAGGCTTTATCGGGTT
GGTTTTTGAGGGGCAGAGGCAAGATTTTGTGGAGCATGGCTGTGAGAGCCCTCTATAAGTTTCCTCCAAAGGGCATCATTTTCTCTGTAGAACCTCCAAATTCATTTGGC
CAAAAGGGAGGCATTCTTCTTGTGGATGTCATAAAGGGCAAGAAAAAGGGAGAAGTGGTAAATGTGAAGAGGTTGAATGAGTTAGGAATATCTTCCACACTTCTAGATCC
TAAAATGTCACCAAGAACAAGTAGAGGTCCTAGAGCTCAGAAGTCCAGAATTTCTTCCAATGAGGGCCCAAATTGGGTTCTAATTGCTGGTGGTGCATTATTAAGCACCC
TATCAATTCGCCTAGGTTACAGACTGAAACAAGCATTTGACACAAAGCAGCTGAAGGATAGTGGCAATTCTTTAACAGGAAATGTGAAATCTTCTGACAGAAGAAAGGCT
GCTGGATGTCGTTGCTCGAATGTATATTCATTTACACGAGATGATGAATGTAGCTTCAACTGTATGCCAGGAGAGAGGAGGGTTCTTCTCCATGAGTCGTTCGGAAGGGG
GTTTTCTTCTTGTCATAGCTCCTCCTCCCTGGATTGGGAGAAGGTTGTTGCTGACGGTGCTATGATGCTAACCATTGTTGTGGCCTTGCTTTGCCCTGAGTTTCTATTCA
CTAATGCAACCTCATTTTCTTCATCATTTTGGAAATTATGTCGCAGAGATGGCTGCATTGGGATCCCACTGGACCTTCCCGGAGATCTTGTGTCCTTGTCGGCACAGAAG
GTGACCAGGTCCAGTTTGGATTTCTTTGTTCTTACCATACTCGCTGTTGTTGGCGTTGGCATTTCATCTTTGCTTCATTTGTCATTGGGATTATGGGGCTATATTTTTCC
CTTTTCAATTGTCCTTGCAATTTCCCCCTTTTTAATTCTCCACAACAACTCCTTCCTTTCGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCTGCTCAAAACCGAGGATAATAGAACAGTTTGTTTTGTTGGCTGTTTGTCAATGCAATGTGCCACTTGAAAACAGCAAGCAGAAAAGACTCGAGACTCCTAG
TTGGGTTGGGCTGATTGAGATCATCGATACTATTAGCTTGGGTGGAGGCAGAGATGTTCCTTTATGGAGTCTTGAGAAATCCGGGATTTTCTCCTCCAAATCGGCCTTCT
TGAAACTATCAGATTCTTCCCCATCCCTCACGACCCCGTTGATCGACGCCATCAGGAAGAACCACACCCCAAAGAAGGTTAAGGTTTTTCTTTGGTCCCTTGCCCATAGA
AGCCTTAACACTTCAGACCTTCTTCAAAAAAAGTGTAGAAATAGAATGCTCTCTCCTTTGGTGTGCCCCCTGTGCTGGGCTAATTCGGAATCCCTTGACCATCTTTTCCT
TCGTTGCCCTTTTGCTTTTGCGGGTTGGAGGTGGCTGCTGGGGGAATTCAACCTCTCCATTTCCTTGCCTGATAATATAGATGTGTGGTTGGATGAGGCTTTATCGGGTT
GGTTTTTGAGGGGCAGAGGCAAGATTTTGTGGAGCATGGCTGTGAGAGCCCTCTATAAGTTTCCTCCAAAGGGCATCATTTTCTCTGTAGAACCTCCAAATTCATTTGGC
CAAAAGGGAGGCATTCTTCTTGTGGATGTCATAAAGGGCAAGAAAAAGGGAGAAGTGGTAAATGTGAAGAGGTTGAATGAGTTAGGAATATCTTCCACACTTCTAGATCC
TAAAATGTCACCAAGAACAAGTAGAGGTCCTAGAGCTCAGAAGTCCAGAATTTCTTCCAATGAGGGCCCAAATTGGGTTCTAATTGCTGGTGGTGCATTATTAAGCACCC
TATCAATTCGCCTAGGTTACAGACTGAAACAAGCATTTGACACAAAGCAGCTGAAGGATAGTGGCAATTCTTTAACAGGAAATGTGAAATCTTCTGACAGAAGAAAGGCT
GCTGGATGTCGTTGCTCGAATGTATATTCATTTACACGAGATGATGAATGTAGCTTCAACTGTATGCCAGGAGAGAGGAGGGTTCTTCTCCATGAGTCGTTCGGAAGGGG
GTTTTCTTCTTGTCATAGCTCCTCCTCCCTGGATTGGGAGAAGGTTGTTGCTGACGGTGCTATGATGCTAACCATTGTTGTGGCCTTGCTTTGCCCTGAGTTTCTATTCA
CTAATGCAACCTCATTTTCTTCATCATTTTGGAAATTATGTCGCAGAGATGGCTGCATTGGGATCCCACTGGACCTTCCCGGAGATCTTGTGTCCTTGTCGGCACAGAAG
GTGACCAGGTCCAGTTTGGATTTCTTTGTTCTTACCATACTCGCTGTTGTTGGCGTTGGCATTTCATCTTTGCTTCATTTGTCATTGGGATTATGGGGCTATATTTTTCC
CTTTTCAATTGTCCTTGCAATTTCCCCCTTTTTAATTCTCCACAACAACTCCTTCCTTTCGAAGAAATAG
Protein sequenceShow/hide protein sequence
MDACSKPRIIEQFVLLAVCQCNVPLENSKQKRLETPSWVGLIEIIDTISLGGGRDVPLWSLEKSGIFSSKSAFLKLSDSSPSLTTPLIDAIRKNHTPKKVKVFLWSLAHR
SLNTSDLLQKKCRNRMLSPLVCPLCWANSESLDHLFLRCPFAFAGWRWLLGEFNLSISLPDNIDVWLDEALSGWFLRGRGKILWSMAVRALYKFPPKGIIFSVEPPNSFG
QKGGILLVDVIKGKKKGEVVNVKRLNELGISSTLLDPKMSPRTSRGPRAQKSRISSNEGPNWVLIAGGALLSTLSIRLGYRLKQAFDTKQLKDSGNSLTGNVKSSDRRKA
AGCRCSNVYSFTRDDECSFNCMPGERRVLLHESFGRGFSSCHSSSSLDWEKVVADGAMMLTIVVALLCPEFLFTNATSFSSSFWKLCRRDGCIGIPLDLPGDLVSLSAQK
VTRSSLDFFVLTILAVVGVGISSLLHLSLGLWGYIFPFSIVLAISPFLILHNNSFLSKK