; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024506 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024506
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationscaffold12:15387761..15391601
RNA-Seq ExpressionSpg024506
SyntenySpg024506
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QAU08184.1 Orf188, partial [Dipsacus asper]4.9e-4471.43Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK LLKEN LPSR                                ADL IG+FLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

QHB76020.1 NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo]4.9e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

WP_189293768.1 NADH-quinone oxidoreductase subunit H [Streptomyces fumigatiscleroticus]4.9e-4472.11Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADL+IGVFLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

YP_009456117.1 NADH dehydrogenase subunit 1 [Momordica charantia]4.9e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        +SVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN  PSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

YP_009738258.1 NADH dehydrogenase subunit 1 [Siraitia siamensis]4.9e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

TrEMBL top hitse value%identityAlignment
A0A2I6C034 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.4e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        +SVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN  PSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

A0A4S4DJL6 Complex1_49kDa domain-containing protein3.1e-4467.52Show/hide
Query:  RVSLMHPKPEVSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGV
        R  +  P   + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSR                                ADL IGV
Subjt:  RVSLMHPKPEVSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGV

Query:  FLWIAISSVAPIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
        FLWIAISS+AP+GLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
Subjt:  FLWIAISSVAPIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

A0A6B7ES87 Orf188 (Fragment)2.4e-4471.43Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK LLKEN LPSR                                ADL IG+FLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

A0A6B9MB92 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.4e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

A0A6C0U9F1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.4e-4473.1Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADLHIGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

SwissProt top hitse value%identityAlignment
A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.8e-4470.63Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSR                                ADL IGVFLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISL
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL

P06254 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.0e-4568.71Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK LLKEN +PS                                 ADL IGVF WIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR
        P+GLLMS YGSN KYSFLGGLRAAAQSISYEIPL LCVLSISLRVIR
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

Q06FP9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.0e-4469.93Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGP G+LQALADGTK LLKEN LPSR                                ADL++GVFLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISL
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL

Q2L952 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.3e-4469.23Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSR                                ADL+IG+FLWIAISS+A
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL
        P+GLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISL
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.0e-4472.03Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSR                                ADL IGVFLWIAISSVA
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL
        PIGLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISL
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL

Arabidopsis top hitse value%identityAlignment
AT2G07785.1 NADH dehydrogenase family protein5.3e-0447.62Show/hide
Query:  AGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRADLHI
        A +Q+R GP+  G  G+LQ LADG+K +LKE   PS A+  +
Subjt:  AGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRADLHI

ATCG01100.1 NADH dehydrogenase family protein8.1e-4570.21Show/hide
Query:  VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVAPI
        VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN  PSR                                ADL+IG+FLWIAISS+API
Subjt:  VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSR--------------------------------ADLHIGVFLWIAISSVAPI

Query:  GLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL
        GLLMS YGSN KYSFLGGLRAAAQSISYEIPLTLCVLSISL
Subjt:  GLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISL

ATMG00516.1 NADH dehydrogenase 1C3.0e-1533.79Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS A                                D +IG+    AISS+ 
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
          G++++   SN KY+FLG LR+AAQ +SYE+ + L ++++ + V
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

ATMG01120.1 NADH dehydrogenase 1B3.0e-1533.79Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS A                                D +IG+    AISS+ 
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
          G++++   SN KY+FLG LR+AAQ +SYE+ + L ++++ + V
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV

ATMG01275.1 NADH dehydrogenase 1A3.0e-1533.79Show/hide
Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS A                                D +IG+    AISS+ 
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRA--------------------------------DLHIGVFLWIAISSVA

Query:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV
          G++++   SN KY+FLG LR+AAQ +SYE+ + L ++++ + V
Subjt:  PIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTGCCGCTGGCCTACCTATTCTCCTAATGCAACCCGGCGGGGCATGGCATTCAATCCTATCTCAATATATGCTCCTCCAAGGCCTAAGGGTGGATTGAATCCAAT
CCCATCCAGCATAGGCGGGGCTGGGAGGTATGAGTCGATCGGATGCAGGGAAGCCCAGGCAATCCGTTCCTATCAATCATTCGTACAACCCAGTTCATCCGATTACTACA
AGGATGAACCCAATCCGGAATATGAACCGAAAAAGAAAAGACCTATTGAACCGATCACAGGAATACCTGTTACAGTACCTATCAGCCAAAAAGGAATCCTTCCAGTAGTA
TCGGCCATTTACCCCATTTCATCAAGGGTACGAAAGCTGTTTCCGCACACTAAGCCTATGCTTCTTTGTAAGCTTTCTCGTAGTTCATATCAGACTTGGAAGCGGGTGAG
TCTAATGCACCCGAAGCCTGAAGTTAGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGGATACAACAACGGATTGGACCTGAATATGCGGGTCCTTTGG
GGGTTCTTCAAGCTTTAGCAGATGGTACAAAACCACTTTTGAAAGAAAATCCGCTTCCATCTAGAGCCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGT
GTTGCTCCCATCGGACTTCTTATGTCAAGATATGGATCCAATAAGAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCTATTAGTTATGAAATACCATTAAC
TCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTGCCGCTGGCCTACCTATTCTCCTAATGCAACCCGGCGGGGCATGGCATTCAATCCTATCTCAATATATGCTCCTCCAAGGCCTAAGGGTGGATTGAATCCAAT
CCCATCCAGCATAGGCGGGGCTGGGAGGTATGAGTCGATCGGATGCAGGGAAGCCCAGGCAATCCGTTCCTATCAATCATTCGTACAACCCAGTTCATCCGATTACTACA
AGGATGAACCCAATCCGGAATATGAACCGAAAAAGAAAAGACCTATTGAACCGATCACAGGAATACCTGTTACAGTACCTATCAGCCAAAAAGGAATCCTTCCAGTAGTA
TCGGCCATTTACCCCATTTCATCAAGGGTACGAAAGCTGTTTCCGCACACTAAGCCTATGCTTCTTTGTAAGCTTTCTCGTAGTTCATATCAGACTTGGAAGCGGGTGAG
TCTAATGCACCCGAAGCCTGAAGTTAGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGGATACAACAACGGATTGGACCTGAATATGCGGGTCCTTTGG
GGGTTCTTCAAGCTTTAGCAGATGGTACAAAACCACTTTTGAAAGAAAATCCGCTTCCATCTAGAGCCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGT
GTTGCTCCCATCGGACTTCTTATGTCAAGATATGGATCCAATAAGAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCTATTAGTTATGAAATACCATTAAC
TCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA
Protein sequenceShow/hide protein sequence
MMCRWPTYSPNATRRGMAFNPISIYAPPRPKGGLNPIPSSIGGAGRYESIGCREAQAIRSYQSFVQPSSSDYYKDEPNPEYEPKKKRPIEPITGIPVTVPISQKGILPVV
SAIYPISSRVRKLFPHTKPMLLCKLSRSSYQTWKRVSLMHPKPEVSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRADLHIGVFLWIAISS
VAPIGLLMSRYGSNKKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR