; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024537 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024537
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:16615045..16618131
RNA-Seq ExpressionSpg024537
SyntenySpg024537
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]3.8e-1036.36Show/hide
Query:  IVREFYTNIDDQEGFQVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI------RGTPRRFG
        +VREFY N+ +       + GAQW+ S  E  +F+ + +K E   W+ F+  RLL +TH S V++DR +L++AI+   SID  K I       G  +R G
Subjt:  IVREFYTNIDDQEGFQVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI------RGTPRRFG

Query:  VQHPSNARAI
        +  PS   A+
Subjt:  VQHPSNARAI

EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]2.3e-0743.42Show/hide
Query:  IEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFG
        IEGAQW+ S  E  +F+ + +K E   W+ F+  RLLP+TH S V++DR +L++AI+   SID  K I     R G
Subjt:  IEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-0438.04Show/hide
Query:  EFYTNIDDQEGF----QVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPR
        EF  NI  Q+       V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+  + I    R
Subjt:  EFYTNIDDQEGF----QVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPR

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]8.2e-0542.86Show/hide
Query:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI
        V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+  + I
Subjt:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI

PON71279.1 hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii]8.8e-0734.65Show/hide
Query:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFGVQHPSNARAIVDAFQQDGVCRK
        + + GA+W +S  +      + L   AN W  F+K RLLPTTH  TVS++RVLL++++L   SI+  + I+   R   V+    + A+  +F+   +CR 
Subjt:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFGVQHPSNARAIVDAFQQDGVCRK

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein1.8e-1036.36Show/hide
Query:  IVREFYTNIDDQEGFQVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI------RGTPRRFG
        +VREFY N+ +       + GAQW+ S  E  +F+ + +K E   W+ F+  RLL +TH S V++DR +L++AI+   SID  K I       G  +R G
Subjt:  IVREFYTNIDDQEGFQVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI------RGTPRRFG

Query:  VQHPSNARAI
        +  PS   A+
Subjt:  VQHPSNARAI

A0A061FAJ6 Uncharacterized protein1.1e-0743.42Show/hide
Query:  IEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFG
        IEGAQW+ S  E  +F+ + +K E   W+ F+  RLLP+TH S V++DR +L++AI+   SID  K I     R G
Subjt:  IEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFG

A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-0538.04Show/hide
Query:  EFYTNIDDQEGF----QVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPR
        EF  NI  Q+       V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+  + I    R
Subjt:  EFYTNIDDQEGF----QVGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPR

A0A2P5CPE8 Uncharacterized protein4.0e-0542.86Show/hide
Query:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI
        V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+  + I
Subjt:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDI

A0A2P5DDA9 Uncharacterized protein (Fragment)4.3e-0734.65Show/hide
Query:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFGVQHPSNARAIVDAFQQDGVCRK
        + + GA+W +S  +      + L   AN W  F+K RLLPTTH  TVS++RVLL++++L   SI+  + I+   R   V+    + A+  +F+   +CR 
Subjt:  VGIEGAQWRLSKTEKRTFQVAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFGVQHPSNARAIVDAFQQDGVCRK

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGACGAAAGGAAAGGGATGCTGAGGAAGAGGAGGTGCAGGTTACACTTGAAGCACCGAAAACTAAGGCAAAGAAGAAGAAGACGTCGGAGGAAAAAGAATCTAA
GAGAAGGAAACGACAACAGAGGACTAAAGTCGAAGAGACAGTGCAAAAAGTAGTGGAAGACGTTGCTGCTGATGTGGTTGAAGAGGAAAACCCGATGGAACCTGAGGAAC
AGAATCCTGCACAGAATGATCTGATAGTCGAAAATTCGCAAGAAGTTCAAGACAAACAAGCGGAGGAGGTGCAAGAAAGCGGAAACGAGGAGGAGTTCAAGAGCAGGAGG
CTCAGGTTGAGGTTATTATGCCAGAGGTTCCCCGTCGTCGCCGTCGGAAGCAGAAAGTCGGCTGCGTCAAGTGTTCAAGAATTATCTGTTTTGCTTAATTATCGCTTCGC
CTCCCTGTGGATTCGATACTCGAAATATTTTCGTTTTATATTACTTGCGGCCCGTGCACTTGCAGTATTGGCACTAGCAACAATTGTTCGTGAATTTTATACAAATATAG
ATGATCAAGAAGGATTCCAAGTTGGTATTGAAGGGGCTCAATGGAGACTGTCGAAGACAGAAAAGCGCACGTTCCAAGTAGCTTATTTGAAAAGCGAAGCCAATACATGG
ATGGGCTTCATCAAGTTGCGCTTGCTTCCGACAACTCACGATTCAACGGTTTCTCGAGATCGAGTGCTGCTGGTATTTGCTATTCTTTGTTCTATGAGTATTGATGCTTC
AAAGGACATAAGAGGTACGCCAAGGCGGTTTGGTGTGCAACATCCATCAAATGCAAGAGCAATTGTAGATGCATTCCAGCAGGATGGAGTTTGCCGAAAGGCAATTCCAA
ACCTTCTGGAATTATGTGAAGAGAAGGAATGCCGCCTTGGACTAGTTAGCTTAATTAGATCAAGGCTGTGGCAAGTTCTTGGGATTGAGTCAAAGGTGGTGATTATTTGT
CCATGCCGGAGGAATTATTTTGCTGCACAAGTACTTGGTTTTGCAGAATGCTCAGAATATATTGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGGA
GCAAAACTGCCATGTCACAGCTCGTTATCCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGACGAAAGGAAAGGGATGCTGAGGAAGAGGAGGTGCAGGTTACACTTGAAGCACCGAAAACTAAGGCAAAGAAGAAGAAGACGTCGGAGGAAAAAGAATCTAA
GAGAAGGAAACGACAACAGAGGACTAAAGTCGAAGAGACAGTGCAAAAAGTAGTGGAAGACGTTGCTGCTGATGTGGTTGAAGAGGAAAACCCGATGGAACCTGAGGAAC
AGAATCCTGCACAGAATGATCTGATAGTCGAAAATTCGCAAGAAGTTCAAGACAAACAAGCGGAGGAGGTGCAAGAAAGCGGAAACGAGGAGGAGTTCAAGAGCAGGAGG
CTCAGGTTGAGGTTATTATGCCAGAGGTTCCCCGTCGTCGCCGTCGGAAGCAGAAAGTCGGCTGCGTCAAGTGTTCAAGAATTATCTGTTTTGCTTAATTATCGCTTCGC
CTCCCTGTGGATTCGATACTCGAAATATTTTCGTTTTATATTACTTGCGGCCCGTGCACTTGCAGTATTGGCACTAGCAACAATTGTTCGTGAATTTTATACAAATATAG
ATGATCAAGAAGGATTCCAAGTTGGTATTGAAGGGGCTCAATGGAGACTGTCGAAGACAGAAAAGCGCACGTTCCAAGTAGCTTATTTGAAAAGCGAAGCCAATACATGG
ATGGGCTTCATCAAGTTGCGCTTGCTTCCGACAACTCACGATTCAACGGTTTCTCGAGATCGAGTGCTGCTGGTATTTGCTATTCTTTGTTCTATGAGTATTGATGCTTC
AAAGGACATAAGAGGTACGCCAAGGCGGTTTGGTGTGCAACATCCATCAAATGCAAGAGCAATTGTAGATGCATTCCAGCAGGATGGAGTTTGCCGAAAGGCAATTCCAA
ACCTTCTGGAATTATGTGAAGAGAAGGAATGCCGCCTTGGACTAGTTAGCTTAATTAGATCAAGGCTGTGGCAAGTTCTTGGGATTGAGTCAAAGGTGGTGATTATTTGT
CCATGCCGGAGGAATTATTTTGCTGCACAAGTACTTGGTTTTGCAGAATGCTCAGAATATATTGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGGA
GCAAAACTGCCATGTCACAGCTCGTTATCCATTTTAA
Protein sequenceShow/hide protein sequence
MRGRKERDAEEEEVQVTLEAPKTKAKKKKTSEEKESKRRKRQQRTKVEETVQKVVEDVAADVVEEENPMEPEEQNPAQNDLIVENSQEVQDKQAEEVQESGNEEEFKSRR
LRLRLLCQRFPVVAVGSRKSAASSVQELSVLLNYRFASLWIRYSKYFRFILLAARALAVLALATIVREFYTNIDDQEGFQVGIEGAQWRLSKTEKRTFQVAYLKSEANTW
MGFIKLRLLPTTHDSTVSRDRVLLVFAILCSMSIDASKDIRGTPRRFGVQHPSNARAIVDAFQQDGVCRKAIPNLLELCEEKECRLGLVSLIRSRLWQVLGIESKVVIIC
PCRRNYFAAQVLGFAECSEYIVERLEGAKSVIQQSKEQNCHVTARYPF