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Spg024542 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024542
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold12:16926241..16936525
RNA-Seq ExpressionSpg024542
SyntenySpg024542
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055183.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-0562.79Show/hide
Query:  VSSVRLHREISMLRLLVCPGATNHSEGCNMEIETTQTPETDRI
        VSS+  HREI ++RLLVCPG T HSEGC +E+ET +TP  DR+
Subjt:  VSSVRLHREISMLRLLVCPGATNHSEGCNMEIETTQTPETDRI
TrEMBL top hitse value%identityAlignment
A0A5D3DQ34 Gag/pol protein1.3e-0562.79Show/hide
Query:  VSSVRLHREISMLRLLVCPGATNHSEGCNMEIETTQTPETDRI
        VSS+  HREI ++RLLVCPG T HSEGC +E+ET +TP  DR+
Subjt:  VSSVRLHREISMLRLLVCPGATNHSEGCNMEIETTQTPETDRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCCAGAACATGCATGCTTTAGATACAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTTCCAATTCGGTTCAGCTGCTTTTGTTGGGG
TCCGGTTCGGTCTGCTGCAGCTTATTTACACACTTTTGAAGGCCGGTTCACTCCATGGAGGGTTGGTTCGGGTCGGTTACAAGAGAACTCACCCGACGAGATGCTGTCTA
AGGCTGGAGTCTCCTCCGTTAGGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTTGTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGAAACA
ACGCAAACTCCTGAGACGGATAGGATTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCCAGAACATGCATGCTTTAGATACAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTTCCAATTCGGTTCAGCTGCTTTTGTTGGGG
TCCGGTTCGGTCTGCTGCAGCTTATTTACACACTTTTGAAGGCCGGTTCACTCCATGGAGGGTTGGTTCGGGTCGGTTACAAGAGAACTCACCCGACGAGATGCTGTCTA
AGGCTGGAGTCTCCTCCGTTAGGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTTGTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGAAACA
ACGCAAACTCCTGAGACGGATAGGATTACTTAG
Protein sequenceShow/hide protein sequence
MFFQNMHALDTKLNVLSAFDLQLLPHVPIRFSCFCWGPVRSAAAYLHTFEGRFTPWRVGSGRLQENSPDEMLSKAGVSSVRLHREISMLRLLVCPGATNHSEGCNMEIET
TQTPETDRIT