; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024557 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024557
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionValyl-tRNA synthetase
Genome locationscaffold12:19274906..19275284
RNA-Seq ExpressionSpg024557
SyntenySpg024557
Gene Ontology termsGO:0006418 - tRNA aminoacylation for protein translation (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605705.1 Valine--tRNA ligase, mitochondrial 1, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0865.22Show/hide
Query:  LSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        L+ QS+KL CVHRA FSS SKGI P E  VAP+KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  LSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
KAG7035615.1 Valine--tRNA ligase, mitochondrial 1 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2070.83Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQG VLGEPLLVS  SRQS+KL CVHRA FSS SKGI P E  VAP+KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
XP_022957954.1 valine--tRNA ligase, mitochondrial 1 isoform X2 [Cucurbita moschata]2.1e-2171.88Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQGRVLGEPLLVS  SRQS+KL CVHRA FSS SKGI P E  VAP+KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
XP_022995352.1 valine--tRNA ligase, mitochondrial 1 [Cucurbita maxima]8.6e-2372.92Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQGRVLGEPLLVS  SRQS+KL CVHRA FSS SKGI PSE  VAP KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
XP_023533939.1 valine--tRNA ligase, mitochondrial 1 [Cucurbita pepo subsp. pepo]5.6e-2271.88Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQGRVLGEPLLVSF SRQS+KL CVHRA FSS SKG+ P E  VAP+KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
TrEMBL top hitse value%identityAlignment
A0A6J1H3K8 Valyl-tRNA synthetase1.0e-2171.88Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQGRVLGEPLLVS  SRQS+KL CVHRA FSS SKGI P E  VAP+KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
A0A6J1JYM1 Valyl-tRNA synthetase4.2e-2372.92Show/hide
Query:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
        MRNGI NLLAV  KQGRVLGEPLLVS  SRQS+KL CVHRA FSS SKGI PSE  VAP KD          MES KKPEVEDPEKKKKKEEK  E
Subjt:  MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATGGAATTTTTAATCTGTTGGCAGTGTCTTTCAAACAAGGTAGGGTTCTAGGAGAGCCGTTACTCGTCTCCTTCTTAAGCAGGCAAAGCCACAAGCTCCGCTG
TGTTCATAGAGCTTCGTTTTCTTCATCCTCTAAAGGCATTTATCCTTCTGAAAGTTTTGTTGCTCCAGTTAAAGATGTTCGTGGAAATTCTTGCTTTCTCGGATTAATGG
AATCGGACAAAAAACCTGAAGTGGAAGATCCTGAGAAGAAGAAAAAGAAGGAAGAAAAGGTTTCTGAAACACTG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATGGAATTTTTAATCTGTTGGCAGTGTCTTTCAAACAAGGTAGGGTTCTAGGAGAGCCGTTACTCGTCTCCTTCTTAAGCAGGCAAAGCCACAAGCTCCGCTG
TGTTCATAGAGCTTCGTTTTCTTCATCCTCTAAAGGCATTTATCCTTCTGAAAGTTTTGTTGCTCCAGTTAAAGATGTTCGTGGAAATTCTTGCTTTCTCGGATTAATGG
AATCGGACAAAAAACCTGAAGTGGAAGATCCTGAGAAGAAGAAAAAGAAGGAAGAAAAGGTTTCTGAAACACTG
Protein sequenceShow/hide protein sequence
MRNGIFNLLAVSFKQGRVLGEPLLVSFLSRQSHKLRCVHRASFSSSSKGIYPSESFVAPVKDVRGNSCFLGLMESDKKPEVEDPEKKKKKEEKVSETL