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Spg024573 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024573
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin protein ligase RIN2-like
Genome locationscaffold12:17642682..17645804
RNA-Seq ExpressionSpg024573
SyntenySpg024573
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0034052 - positive regulation of plant-type hypersensitive response (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605710.1 E3 ubiquitin protein ligase RIN2, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
KAG7035619.1 E3 ubiquitin protein ligase RIN2 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK  +   V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
XP_022957821.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita moschata]4.8e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
XP_022995635.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita maxima]4.8e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
XP_023533476.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita pepo subsp. pepo]6.3e-3079Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEK+IGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
TrEMBL top hitse value%identityAlignment
A0A0A0KG75 RING-type domain-containing protein4.4e-2977Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI ISAACT LSFIGLQLWTELSIDNLRSEKIIGENPF+TENA  V+DLLL SYVTVGLLANFALNVFVLLILFLK  +   V+ ++  S  +V R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
A0A1S3BMI6 E3 ubiquitin protein ligase RIN2-like isoform X15.7e-2967.19Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI ISAACT LSFIGLQLWTELSIDNLRSEKIIGENPF+TENA  VVDLLL SYVTVGLLANFALNVFVLLILFLK  +   V+ ++  S  +V R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR

Query:  GVPLPFW-SIFVVLFDRETSDIVALLSL
         V    +   F+ L    T   VAL S+
Subjt:  GVPLPFW-SIFVVLFDRETSDIVALLSL
A0A6J1DUP7 E3 ubiquitin protein ligase RIN2-like1.2e-2978Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI ISAACTVLSF+GLQLWTELSI+NL+SEKIIGENPFQTE+AGRV+DLLL SYVTVGLLANFALNVFVLLILFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
A0A6J1H0A8 E3 ubiquitin protein ligase RIN2-like2.3e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
A0A6J1K4H8 E3 ubiquitin protein ligase RIN2-like2.3e-3080Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
        MGVSYI  SAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRV+DLLL SYVTVGLLANFALNVFVLL+LFLK      V+ ++  S  LV R
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPR
SwissProt top hitse value%identityAlignment
Q8VYC8 E3 ubiquitin protein ligase RIN25.9e-1551.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG+ Y+ +S A T LSF+GLQ+WTELS+D LR++ +I +N     ++   ++LLLGSY T+ LL NF LNV++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
Q8W4Q5 E3 ubiquitin protein ligase RIN32.9e-1451.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG++Y+ IS A T LSF+GLQ+WTELS+D LR++ II +N     N+   ++LLL S+ T+ LLA+F LN+++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
Arabidopsis top hitse value%identityAlignment
AT4G25230.1 RPM1 interacting protein 24.2e-1651.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG+ Y+ +S A T LSF+GLQ+WTELS+D LR++ +I +N     ++   ++LLLGSY T+ LL NF LNV++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
AT4G25230.2 RPM1 interacting protein 24.2e-1651.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG+ Y+ +S A T LSF+GLQ+WTELS+D LR++ +I +N     ++   ++LLLGSY T+ LL NF LNV++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
AT5G51450.1 RPM1 interacting protein 32.1e-1551.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG++Y+ IS A T LSF+GLQ+WTELS+D LR++ II +N     N+   ++LLL S+ T+ LLA+F LN+++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
AT5G51450.2 RPM1 interacting protein 32.1e-1551.25Show/hide
Query:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK
        MG++Y+ IS A T LSF+GLQ+WTELS+D LR++ II +N     N+   ++LLL S+ T+ LLA+F LN+++LL+L LK
Subjt:  MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTCAGCTATATAACAATTTCTGCGGCATGTACAGTATTAAGTTTTATCGGTCTCCAGTTATGGACAGAGTTATCAATAGATAACCTAAGATCGGAAAAAATAAT
TGGTGAAAATCCTTTTCAGACCGAGAATGCTGGCCGTGTTGTTGATTTGCTCTTAGGTTCCTACGTCACTGTAGGACTGCTGGCTAATTTTGCACTTAATGTGTTTGTTC
TACTCATACTATTTCTCAAGGTCAAAGTTCCAAAGAAAGTTCAGTTCTTCGCTTTGATGAGTATGTCTTTGGTCCCTCGGGGAGTGCCCCTTCCTTTTTGGTCGATTTTT
GTCGTCTTATTCGATAGGGAAACTTCAGATATCGTGGCTCTCTTATCTTTGATTGAGGATGTTGGCCTCAGATTGAAGAAATGGATGTTTGCTTTTGGAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTCAGCTATATAACAATTTCTGCGGCATGTACAGTATTAAGTTTTATCGGTCTCCAGTTATGGACAGAGTTATCAATAGATAACCTAAGATCGGAAAAAATAAT
TGGTGAAAATCCTTTTCAGACCGAGAATGCTGGCCGTGTTGTTGATTTGCTCTTAGGTTCCTACGTCACTGTAGGACTGCTGGCTAATTTTGCACTTAATGTGTTTGTTC
TACTCATACTATTTCTCAAGGTCAAAGTTCCAAAGAAAGTTCAGTTCTTCGCTTTGATGAGTATGTCTTTGGTCCCTCGGGGAGTGCCCCTTCCTTTTTGGTCGATTTTT
GTCGTCTTATTCGATAGGGAAACTTCAGATATCGTGGCTCTCTTATCTTTGATTGAGGATGTTGGCCTCAGATTGAAGAAATGGATGTTTGCTTTTGGAGTCTAG
Protein sequenceShow/hide protein sequence
MGVSYITISAACTVLSFIGLQLWTELSIDNLRSEKIIGENPFQTENAGRVVDLLLGSYVTVGLLANFALNVFVLLILFLKVKVPKKVQFFALMSMSLVPRGVPLPFWSIF
VVLFDRETSDIVALLSLIEDVGLRLKKWMFAFGV