; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024582 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024582
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 1
Genome locationscaffold12:18268875..18300423
RNA-Seq ExpressionSpg024582
SyntenySpg024582
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR018846 - Cleavage/polyadenylation specificity factor, A subunit, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049896.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis melo var. makuwa]1.4e-26895.17Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS FITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVL SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

XP_008441850.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis melo]1.4e-26895.17Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS FITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVL SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

XP_011648998.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis sativus]7.9e-26794.16Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS +ITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE +SSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDS HSLRTSSMHCF+GPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCM+SALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        ++LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

XP_023520837.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-26594.37Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMH PTGIENCDSGFITHSRADFVP V SH D+ +SDWPPRREIGP+PNLVVTAGNVLEVY VRVQE+GG+E RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESM ILSSRGGDGSKKRDSIILVF+EAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEA GN+GA SARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRV+WKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVS DSSQDMPRSNFNVELDAA+ATWLLNDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIG+SLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPT+KRMRRSSSDALQDMVGGDELSLYG   NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

XP_038887722.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Benincasa hispida]9.6e-27396.58Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDSGFITHS ADFVPGVASH D+ DSDW PRREIGP+PNLVVTAGNVLEVY VRVQEEGGRE +SSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDS HSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDA  AKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

TrEMBL top hitse value%identityAlignment
A0A0A0LKI9 Uncharacterized protein3.8e-26794.16Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS +ITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE +SSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDS HSLRTSSMHCF+GPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCM+SALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        ++LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

A0A1S3B4E8 cleavage and polyadenylation specificity factor subunit 1 isoform X16.9e-26995.17Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS FITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVL SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

A0A5A7U6U4 Cleavage and polyadenylation specificity factor subunit 1 isoform X16.9e-26995.17Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMHWPTGIENCDS FITHSRADFVP V SH+D+ DSDW PRR+IGP+PNLVVTAGNVLEVY VRV EEGGRE RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEAFGN GAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLV+SANSIHY+SQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL+NDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVL SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLAS+LKDE GDIEVDA TAKRMRRSSSDALQDMVGGDELSLYGSA NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

A0A6J1EY93 cleavage and polyadenylation specificity factor subunit 1 isoform X12.3e-26493.96Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMH PTGIENCDSGFITHSR+DFVP V SH D+ +SDWPPRREIGP+PNLVVTAGNVLEVY VRVQE+GG+E RSSGEVRRGG MDGVSGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESM ILSSRGGDGSKKRDSIILVF+EAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEA GN+GA SARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRV+WKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLVVSANSIHY SQSASCMLALNNYAVS DSSQDMPRSNFNVELDAA+ATWLLNDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIG+SLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPT+KRMRRSSSDALQDMVGGDELSLYG   NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

A0A6J1I7X9 cleavage and polyadenylation specificity factor subunit 1 isoform X19.4e-26694.57Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL
        MSFAAYRMMH PTGIENCDSGFITHSRADFVP V SH D+ +SDWPPRREIGP+PNLVVTAGNVLEVY VRVQEEGG+E RSSGEVRRGG MDG+SGASL
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASL

Query:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
        ELVCHYRLHGNVESM ILSSRGGDGSKKRDSIILVF+EAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM
Subjt:  ELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQM

Query:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA
        IILKASQAGSGLVVDDEA G IGA SARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRV+WKHHTCMISALSISTTLKQHPLIWSA
Subjt:  IILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA

Query:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL
        N+LPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVS DSSQDMPRSNFNVELDAA+ATWLLNDVALLSTKTGELLLL LVYDGRVVQRL
Subjt:  NSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL

Query:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ
        DLSKSKASVLTSGIASIG+SLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYG   NNTESAQ
Subjt:  DLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQ

SwissProt top hitse value%identityAlignment
Q10569 Cleavage and polyadenylation specificity factor subunit 11.3e-5936.5Show/hide
Query:  NLVVTAGNVLEVYAV-RVQEEGGREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLR
        NLVV   + L VY + R  E   +  RS+      G         LELV  +   GNV SMA +   G     KRD+++L F++AK+SV+E+D   H L+
Subjt:  NLVVTAGNVLEVYAV-RVQEEGGREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLR

Query:  TSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFVH
        T S+H FE P+   L+ G       P V+VDP GRC  +L+YG ++++L   +    L  + E     G  S+ +  SY+I++R LD K  ++ D  F+H
Subjt:  TSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFVH

Query:  GYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADSS
        GY EP ++IL E   TW GRV+ +  TC I A+S++ T K HP+IWS  SLP D  + LAVP PIGGV++ + NS+ Y +QS     +ALN+      + 
Subjt:  GYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADSS

Query:  QDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLK
            +    + LD A A ++  D  ++S K GE+ +LTL+ DG R V+     K+ ASVLT+ + ++     FLGSRLG+SLL++++  +      +S  
Subjt:  QDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLK

Query:  DEVGDIEVDAPTAKRMRRS-----SSDALQDMVGGDELSLYGS-APNNTESA
         E  D E      KR+  +     S    QD V  DE+ +YGS A + T+ A
Subjt:  DEVGDIEVDAPTAKRMRRS-----SSDALQDMVGGDELSLYGS-APNNTESA

Q10570 Cleavage and polyadenylation specificity factor subunit 13.9e-5936.12Show/hide
Query:  NLVVTAGNVLEVYAVRVQEEG--GREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSL
        NLVV   + L VY +    E     +  + G+  R           LEL   +   GNV SMA +   G     KRD+++L F++AK+SV+E+D   H L
Subjt:  NLVVTAGNVLEVYAVRVQEEG--GREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSL

Query:  RTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFV
        +T S+H FE P+   L+ G       P V+VDP GRC  +LVYG ++++L   +    L  + E     G  S+ +  SY+I++R LD K  ++ D  F+
Subjt:  RTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFV

Query:  HGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADS
        HGY EP ++IL E   TW GRV+ +  TC I A+S++ T K HP+IWS  SLP D  + LAVP PIGGV+V + NS+ Y +QS     +ALN+      +
Subjt:  HGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADS

Query:  SQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSL
             +    + LD A AT++  D  ++S K GE+ +LTL+ DG R V+     K+ ASVLT+ + ++     FLGSRLG+SLL++++  +      +S 
Subjt:  SQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSL

Query:  KDEVGDIEVDAPTAKRM------RRSSSDALQDMVGGDELSLYGS-APNNTESA
          E  D E      KR+        +     QD V  DE+ +YGS A + T+ A
Subjt:  KDEVGDIEVDAPTAKRM------RRSSSDALQDMVGGDELSLYGS-APNNTESA

Q7XWP1 Probable cleavage and polyadenylation specificity factor subunit 15.8e-17260.6Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADFV---------PGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEE-----GGREPRSSGEV
        MS+AAY+MMHWPTG+++C +GF+THS +D           PG     D   +   PRR +GP PNLVV A NVLEVYAVR +       GG +P SS   
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADFV---------PGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEE-----GGREPRSSGEV

Query:  RRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSK-KRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVD
          G  +DG+SGA LELVC+YRLHGN+ESM +LS    DG++ +R +I L F++AKI+ LEFDD+IH LRTSSMHCFEGP+W HLKRGRESFA GPV+K D
Subjt:  RRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSK-KRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVD

Query:  PQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISAL
        P GRCG  L YGLQMIILKA+Q G  LV +DE    + + +  +ESSYLI+LR LD+ HVKDF FVHGYIEPV+VILHEQE TWAGR+  KHHTCMISA 
Subjt:  PQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISAL

Query:  SISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGEL
        SIS TLKQHP+IWSA +LPHDAY+LLAVP PI GVLV+ ANSIHYHSQS SC L LNN++   D S ++ +SNF VELDAA ATWL ND+ + STK GE+
Subjt:  SISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGEL

Query:  LLLTLVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSL
        LLLT+VYDGRVVQRLDL KSKASVL+S + SIGNS FFLGSRLGDSLLVQFS     S L     +   DIE D P +KR++R  SD LQD+   +ELS 
Subjt:  LLLTLVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSL

Query:  YG-SAPNNTESAQAQGALRRNGLL--GPRRKSS
            APN+ ESAQ    + R+ L+  GP +  S
Subjt:  YG-SAPNNTESAQAQGALRRNGLL--GPRRKSS

Q9EPU4 Cleavage and polyadenylation specificity factor subunit 13.9e-5936.36Show/hide
Query:  NLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRT
        NLVV   + L VY +    E   +         G T        LELV  +   GNV SMA +   G     KRD+++L F++AK+SV+E+D   H L+T
Subjt:  NLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRT

Query:  SSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFVHG
         S+H FE P+   L+ G       P V+VDP GRC  +L+YG ++++L   +    L  + E     G  S+ +  SY+I++R LD K  ++ D  F+HG
Subjt:  SSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVK--HVKDFVFVHG

Query:  YIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADSSQ
        Y EP ++IL E   TW GRV+ +  TC I A+S++ T K HP+IWS  SLP D  + LAVP PIGGV++ + NS+ Y +QS     +ALN+      +  
Subjt:  YIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCM-LALNNYAVSADSSQ

Query:  DMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKD
           +    + LD A A ++  D  ++S K GE+ +LTL+ DG R V+     K+ ASVLT+ + ++     FLGSRLG+SLL++++  +     ASS++ 
Subjt:  DMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDG-RVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKD

Query:  EVGDIEVDAPTAKRMR-----RSSSDALQDMVGGDELSLYGS-APNNTESA
        E  D E      KR+             QD V  DE+ +YGS A + T+ A
Subjt:  EVGDIEVDAPTAKRMR-----RSSSDALQDMVGGDELSLYGS-APNNTESA

Q9FGR0 Cleavage and polyadenylation specificity factor subunit 11.1e-21073.51Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADF---VPGVASHTDEFDSDWP-PRREIGPLPNLVVTAGNVLEVYAVRVQEEGG-REPRSSGEVRRGGTMDGV
        MSFAAY+MMHWPTG+ENC SG+ITHS +D    +P V+ H D+ +++WP P+R IGPLPN+V+TA N+LEVY VR QEEG  +E R+    +RGG MDGV
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADF---VPGVASHTDEFDSDWP-PRREIGPLPNLVVTAGNVLEVYAVRVQEEGG-REPRSSGEVRRGGTMDGV

Query:  SGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLV
         G SLELVCHYRLHGNVES+A+L   GG+ SK RDSIIL F++AKISVLEFDDSIHSLR +SMHCFEGP WLHLKRGRESF RGP+VKVDPQGRCGGVLV
Subjt:  SGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLV

Query:  YGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHP
        YGLQMIILK SQ GSGLV DD+AF + G +SARVESSY+INLRDL++KHVKDFVF+HGYIEPV+VIL E+E TWAGRVSWKHHTC++SALSI++TLKQHP
Subjt:  YGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHP

Query:  LIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGR
        +IWSA +LPHDAYKLLAVPSPIGGVLV+ AN+IHYHSQSASC LALNNYA SADSSQ++P SNF+VELDAA+ TW+ NDVALLSTK+GELLLLTL+YDGR
Subjt:  LIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGR

Query:  VVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTES
         VQRLDLSKSKASVL S I S+GNSLFFLGSRLGDSLLVQFSC  G +     L+DE  DIE +   AKR+ R +SD  QD +G +ELSL+GS PNN++S
Subjt:  VVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTES

Query:  AQ
        AQ
Subjt:  AQ

Arabidopsis top hitse value%identityAlignment
AT4G05420.1 damaged DNA binding protein 1A3.2e-0822.29Show/hide
Query:  LHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVY-GLQMIILKAS
        ++G + ++ +    G    + +D + +  +  K  VL++D     L T +M           + GR +   G +  +DP  R  G+ +Y GL  +I    
Subjt:  LHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVY-GLQMIILKAS

Query:  QAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLI---WSANSL
                    F N G    +++ ++ I L +L V  +K   F+ G  +P + +L++           +H        +   +LK    +   WS NSL
Subjt:  QAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLI---WSANSL

Query:  PHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLS
         + A  L+ VP P+ GVL++   +I Y S SA   + +      A    D+  S +                 LL    G + LL + ++   V  L + 
Subjt:  PHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLS

Query:  KSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSG
            + + S I+ + N++ F+GS  GDS LV+ +    + G
Subjt:  KSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSG

AT4G05420.2 damaged DNA binding protein 1A1.3e-0623.64Show/hide
Query:  RVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLI---WSANSLPHDAYKLLAVPSPIGGVLVVS
        +++ ++ I L +L V  +K   F+ G  +P + +L++           +H        +   +LK    +   WS NSL + A  L+ VP P+ GVL++ 
Subjt:  RVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLI---WSANSLPHDAYKLLAVPSPIGGVLVVS

Query:  ANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFL
          +I Y S SA   + +      A    D+  S +                 LL    G + LL + ++   V  L +     + + S I+ + N++ F+
Subjt:  ANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFL

Query:  GSRLGDSLLVQFSCGVGSSG
        GS  GDS LV+ +    + G
Subjt:  GSRLGDSLLVQFSCGVGSSG

AT4G21100.1 damaged DNA binding protein 1B1.7e-0921.94Show/hide
Query:  VSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVL
        +S   L+ +    L+G + +M +    G    + +D + +  +  K  VL++D     L T +M           + GR +   G +  +DP  R  G+ 
Subjt:  VSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVL

Query:  VY-GLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQ
        +Y GL  +I                F N G    +++ ++ I L +L V  +K   F++G  +P + +L++             H              +
Subjt:  VY-GLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQ

Query:  HPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYD
         P  WS N+L + A  L+ VPSP+ GVL++   +I Y S +A   + +      A    D+  S +                 LL    G + LL + ++
Subjt:  HPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYD

Query:  GRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSG
           V  L +     + + S I+ + N++ F+GS  GDS L++ +    + G
Subjt:  GRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSG

AT5G51660.1 cleavage and polyadenylation specificity factor 1607.7e-21273.51Show/hide
Query:  MSFAAYRMMHWPTGIENCDSGFITHSRADF---VPGVASHTDEFDSDWP-PRREIGPLPNLVVTAGNVLEVYAVRVQEEGG-REPRSSGEVRRGGTMDGV
        MSFAAY+MMHWPTG+ENC SG+ITHS +D    +P V+ H D+ +++WP P+R IGPLPN+V+TA N+LEVY VR QEEG  +E R+    +RGG MDGV
Subjt:  MSFAAYRMMHWPTGIENCDSGFITHSRADF---VPGVASHTDEFDSDWP-PRREIGPLPNLVVTAGNVLEVYAVRVQEEGG-REPRSSGEVRRGGTMDGV

Query:  SGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLV
         G SLELVCHYRLHGNVES+A+L   GG+ SK RDSIIL F++AKISVLEFDDSIHSLR +SMHCFEGP WLHLKRGRESF RGP+VKVDPQGRCGGVLV
Subjt:  SGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLV

Query:  YGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHP
        YGLQMIILK SQ GSGLV DD+AF + G +SARVESSY+INLRDL++KHVKDFVF+HGYIEPV+VIL E+E TWAGRVSWKHHTC++SALSI++TLKQHP
Subjt:  YGLQMIILKASQAGSGLVVDDEAFGNIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHP

Query:  LIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGR
        +IWSA +LPHDAYKLLAVPSPIGGVLV+ AN+IHYHSQSASC LALNNYA SADSSQ++P SNF+VELDAA+ TW+ NDVALLSTK+GELLLLTL+YDGR
Subjt:  LIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHYHSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGR

Query:  VVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTES
         VQRLDLSKSKASVL S I S+GNSLFFLGSRLGDSLLVQFSC  G +     L+DE  DIE +   AKR+ R +SD  QD +G +ELSL+GS PNN++S
Subjt:  VVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTES

Query:  AQ
        AQ
Subjt:  AQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTGCAGCTTATAGAATGATGCACTGGCCTACAGGCATCGAGAACTGTGATTCAGGCTTTATCACCCATTCTCGCGCCGATTTTGTACCCGGTGTTGCATCTCA
CACCGACGAATTCGACTCTGACTGGCCGCCCCGCCGAGAAATTGGTCCACTTCCTAATCTCGTTGTCACCGCCGGTAATGTCCTCGAGGTATATGCTGTTAGGGTTCAAG
AAGAGGGTGGAAGAGAACCAAGAAGCTCAGGAGAAGTCAGGCGCGGTGGCACTATGGATGGAGTCTCTGGGGCCTCGCTCGAGCTTGTTTGCCACTATAGGTTGCATGGT
AATGTTGAGTCCATGGCAATTTTGTCTAGTAGAGGAGGTGATGGTTCCAAGAAGAGAGATTCGATTATATTAGTCTTTCAAGAAGCAAAAATTTCAGTGCTAGAGTTTGA
TGATTCTATCCATAGTCTCCGTACAAGCTCAATGCATTGCTTTGAGGGTCCACAATGGCTTCATTTGAAAAGAGGTCGAGAATCATTTGCAAGAGGTCCAGTGGTAAAGG
TTGATCCTCAAGGCAGGTGTGGAGGAGTTCTTGTTTATGGTTTGCAAATGATAATACTTAAGGCTTCTCAGGCTGGTTCTGGTTTGGTTGTGGACGATGAAGCTTTTGGT
AACATAGGTGCAATTTCTGCTCGAGTTGAATCATCATACCTAATCAACCTACGAGATTTGGATGTGAAGCATGTAAAGGATTTTGTATTTGTACATGGTTATATTGAACC
TGTGATGGTGATTCTTCATGAGCAGGAACTTACCTGGGCTGGCCGTGTTTCATGGAAGCATCATACATGTATGATTTCTGCACTAAGTATCAGCACAACCTTGAAGCAGC
ATCCTCTAATATGGTCTGCCAATAGCCTCCCTCATGATGCTTACAAGCTACTTGCAGTGCCATCACCAATTGGTGGTGTACTTGTTGTCAGTGCAAATAGCATTCATTAT
CATAGTCAGTCAGCTTCATGCATGTTGGCGTTGAATAATTATGCTGTTTCTGCTGATAGCAGTCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGACGCTGCCAA
TGCTACATGGTTGCTAAATGACGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGACACTTGTCTATGATGGACGGGTTGTGCAGAGACTTGATCTTTCAA
AGTCTAAAGCTTCAGTACTTACATCGGGCATTGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTGCTTGTGCAGTTTAGTTGCGGAGTG
GGATCCTCAGGATTGGCATCCAGTCTAAAGGATGAGGTTGGAGATATTGAAGTTGATGCTCCTACTGCAAAGCGAATGCGTAGATCATCTTCTGATGCTCTACAAGATAT
GGTTGGAGGAGATGAGCTCTCATTGTATGGTTCAGCTCCAAATAATACAGAATCTGCTCAGGCTCAAGGCGCACTAAGGCGCAATGGCCTCCTGGGGCCTAGGCGCAAGT
CATCGAGTCGGGGTCCAAGGGAGAAGCGCCCGGTTTTGGGGGTTCGGGGGTGCAACGTGACCTCCGATGGGGGTTCGGAGACAACGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTGCAGCTTATAGAATGATGCACTGGCCTACAGGCATCGAGAACTGTGATTCAGGCTTTATCACCCATTCTCGCGCCGATTTTGTACCCGGTGTTGCATCTCA
CACCGACGAATTCGACTCTGACTGGCCGCCCCGCCGAGAAATTGGTCCACTTCCTAATCTCGTTGTCACCGCCGGTAATGTCCTCGAGGTATATGCTGTTAGGGTTCAAG
AAGAGGGTGGAAGAGAACCAAGAAGCTCAGGAGAAGTCAGGCGCGGTGGCACTATGGATGGAGTCTCTGGGGCCTCGCTCGAGCTTGTTTGCCACTATAGGTTGCATGGT
AATGTTGAGTCCATGGCAATTTTGTCTAGTAGAGGAGGTGATGGTTCCAAGAAGAGAGATTCGATTATATTAGTCTTTCAAGAAGCAAAAATTTCAGTGCTAGAGTTTGA
TGATTCTATCCATAGTCTCCGTACAAGCTCAATGCATTGCTTTGAGGGTCCACAATGGCTTCATTTGAAAAGAGGTCGAGAATCATTTGCAAGAGGTCCAGTGGTAAAGG
TTGATCCTCAAGGCAGGTGTGGAGGAGTTCTTGTTTATGGTTTGCAAATGATAATACTTAAGGCTTCTCAGGCTGGTTCTGGTTTGGTTGTGGACGATGAAGCTTTTGGT
AACATAGGTGCAATTTCTGCTCGAGTTGAATCATCATACCTAATCAACCTACGAGATTTGGATGTGAAGCATGTAAAGGATTTTGTATTTGTACATGGTTATATTGAACC
TGTGATGGTGATTCTTCATGAGCAGGAACTTACCTGGGCTGGCCGTGTTTCATGGAAGCATCATACATGTATGATTTCTGCACTAAGTATCAGCACAACCTTGAAGCAGC
ATCCTCTAATATGGTCTGCCAATAGCCTCCCTCATGATGCTTACAAGCTACTTGCAGTGCCATCACCAATTGGTGGTGTACTTGTTGTCAGTGCAAATAGCATTCATTAT
CATAGTCAGTCAGCTTCATGCATGTTGGCGTTGAATAATTATGCTGTTTCTGCTGATAGCAGTCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGACGCTGCCAA
TGCTACATGGTTGCTAAATGACGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGACACTTGTCTATGATGGACGGGTTGTGCAGAGACTTGATCTTTCAA
AGTCTAAAGCTTCAGTACTTACATCGGGCATTGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTGCTTGTGCAGTTTAGTTGCGGAGTG
GGATCCTCAGGATTGGCATCCAGTCTAAAGGATGAGGTTGGAGATATTGAAGTTGATGCTCCTACTGCAAAGCGAATGCGTAGATCATCTTCTGATGCTCTACAAGATAT
GGTTGGAGGAGATGAGCTCTCATTGTATGGTTCAGCTCCAAATAATACAGAATCTGCTCAGGCTCAAGGCGCACTAAGGCGCAATGGCCTCCTGGGGCCTAGGCGCAAGT
CATCGAGTCGGGGTCCAAGGGAGAAGCGCCCGGTTTTGGGGGTTCGGGGGTGCAACGTGACCTCCGATGGGGGTTCGGAGACAACGCCCTAG
Protein sequenceShow/hide protein sequence
MSFAAYRMMHWPTGIENCDSGFITHSRADFVPGVASHTDEFDSDWPPRREIGPLPNLVVTAGNVLEVYAVRVQEEGGREPRSSGEVRRGGTMDGVSGASLELVCHYRLHG
NVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSIHSLRTSSMHCFEGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFG
NIGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSANSLPHDAYKLLAVPSPIGGVLVVSANSIHY
HSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGV
GSSGLASSLKDEVGDIEVDAPTAKRMRRSSSDALQDMVGGDELSLYGSAPNNTESAQAQGALRRNGLLGPRRKSSSRGPREKRPVLGVRGCNVTSDGGSETTP