; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024595 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024595
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold12:19669298..19670574
RNA-Seq ExpressionSpg024595
SyntenySpg024595
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037514.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-1457.3Show/hide
Query:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        I + + F    PRGNR SLQ REL KT              L TLSVLRDN+A+VEIELP+PDTLPTS ES  S+SSTW+ELY ESV++
Subjt:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-1458.33Show/hide
Query:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR
        PRGNR  LQ  EL K               L TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+ELY ESV++  +F +
Subjt:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-1463.29Show/hide
Query:  RPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        RPRGNR+SLQ  EL KT             SL TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+EL  E V++
Subjt:  RPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

TYK01989.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-1457.3Show/hide
Query:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        I + + F    PRGNR SLQ REL KT              L TLSVLRDN+A+VEIELP+PDTLPTS ES  S+SSTW+ELY ESV++
Subjt:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

TYK25935.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-1458.33Show/hide
Query:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR
        PRGNR  LQ  EL K               L TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+ELY ESV++  +F +
Subjt:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR

TrEMBL top hitse value%identityAlignment
A0A5A7T223 Reverse transcriptase6.6e-1557.3Show/hide
Query:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        I + + F    PRGNR SLQ REL KT              L TLSVLRDN+A+VEIELP+PDTLPTS ES  S+SSTW+ELY ESV++
Subjt:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

A0A5A7T9P7 Gag/pol protein1.5e-1458.33Show/hide
Query:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR
        PRGNR  LQ  EL K               L TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+ELY ESV++  +F +
Subjt:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR

A0A5A7U9X4 DNA/RNA polymerases superfamily protein6.6e-1563.29Show/hide
Query:  RPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        RPRGNR+SLQ  EL KT             SL TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+EL  E V++
Subjt:  RPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

A0A5D3BV68 Reverse transcriptase6.6e-1557.3Show/hide
Query:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
        I + + F    PRGNR SLQ REL KT              L TLSVLRDN+A+VEIELP+PDTLPTS ES  S+SSTW+ELY ESV++
Subjt:  ICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI

A0A5D3DR18 Gag/pol protein1.5e-1458.33Show/hide
Query:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR
        PRGNR  LQ  EL K               L TLSVLRDN+A+VEIELP+PDTLPTSAESS S+SSTW+ELY ESV++  +F +
Subjt:  PRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYIVNVFVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGGGTAGCAGAGAAGCTCGAATCTGTTCTTGTTGTATTCGGGCGATTTCTGGACATATATGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAG
GTCGAGTCTACAGGCCAGGGAACTAGCCAAGACTCCCGAGGCTATATGGTACTGTGTGCACACAGGTTATATTTCGTTGTTGACGTTGAGTGTACTCCGTGACAACAATG
CTATTGTAGAGATCGAGCTCCCGATGCCTGATACACTTCCAACGTCTGCTGAAAGTTCCAGTTCAAGCTCCAGTACGTGGGTGGAGTTGTACATTGAGTCTGTCTATATT
GTAAATGTTTTTGTAAGGATTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGGGTAGCAGAGAAGCTCGAATCTGTTCTTGTTGTATTCGGGCGATTTCTGGACATATATGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAG
GTCGAGTCTACAGGCCAGGGAACTAGCCAAGACTCCCGAGGCTATATGGTACTGTGTGCACACAGGTTATATTTCGTTGTTGACGTTGAGTGTACTCCGTGACAACAATG
CTATTGTAGAGATCGAGCTCCCGATGCCTGATACACTTCCAACGTCTGCTGAAAGTTCCAGTTCAAGCTCCAGTACGTGGGTGGAGTTGTACATTGAGTCTGTCTATATT
GTAAATGTTTTTGTAAGGATTGGATAG
Protein sequenceShow/hide protein sequence
MAEGSREARICSCCIRAISGHICWESRFHFFRPRGNRSSLQARELAKTPEAIWYCVHTGYISLLTLSVLRDNNAIVEIELPMPDTLPTSAESSSSSSSTWVELYIESVYI
VNVFVRIG