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Spg024596 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024596
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description10 kDa chaperonin isoform X1
Genome locationscaffold12:20302401..20303502
RNA-Seq ExpressionSpg024596
SyntenySpg024596
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005515 - protein binding (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133964.1 10 kDa chaperonin 1, chloroplastic [Cucumis sativus]1.9e-0455.93Show/hide
Query:  VVPQANRVLVRLEELPE----------------------ILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELPE                      ILS+GTEVGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELPE----------------------ILSIGTEVGGSDIAPGKKVV

XP_016898890.1 PREDICTED: 10 kDa chaperonin isoform X2 [Cucumis melo]4.2e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELP                      EILS+G EVGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

XP_022936135.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]4.2e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVL+RLEELP                      EILSIG+EVGGSD+APGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

XP_022974766.1 10 kDa chaperonin 1, chloroplastic-like isoform X1 [Cucurbita maxima]4.2e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVL+RLEELP                      EILSIG+EVGGSD+APGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

XP_038880425.1 10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]4.2e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELP                      EILS+GT+VGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

TrEMBL top hitse value%identityAlignment
A0A0A0L6L9 Uncharacterized protein9.1e-0555.93Show/hide
Query:  VVPQANRVLVRLEELPE----------------------ILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELPE                      ILS+GTEVGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELPE----------------------ILSIGTEVGGSDIAPGKKVV

A0A1S4DT59 10 kDa chaperonin isoform X22.0e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELP                      EILS+G EVGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

A0A5D3CZW2 10 kDa chaperonin isoform X13.5e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVLVRLEELP                      EILS+G EVGG+DIAPGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

A0A6J1FCS3 10 kDa chaperonin 1, chloroplastic-like2.0e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVL+RLEELP                      EILSIG+EVGGSD+APGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

A0A6J1ICA1 10 kDa chaperonin 1, chloroplastic-like isoform X12.0e-0454.24Show/hide
Query:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV
        VVPQA+RVL+RLEELP                      EILSIG+EVGGSD+APGKKV+
Subjt:  VVPQANRVLVRLEELP----------------------EILSIGTEVGGSDIAPGKKVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTGACGGGAGCTTTGGATCAACACACAACGTCTTTTCTCCTCTCTGCGGCGCCATCTTCTCGTTCTCTCCGGCAGCGTCGTCGTCTTCTTCCTTCGCGTGCGCA
GCAGTCAGGCGGTTCGATCTTCTCGTTCTCTCCGGCAGCGTCTTCGCGTGCGCAGCAGTCAGGCGATTCGGCTTCGTCGTACACAGTGGTTCCTCAAGCTAATAGAGTTC
TCGTTCGTCTTGAGGAGCTTCCTGAGATTCTATCCATTGGAACAGAAGTTGGAGGGAGTGATATTGCACCTGGAAAGAAGGTTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGTGACGGGAGCTTTGGATCAACACACAACGTCTTTTCTCCTCTCTGCGGCGCCATCTTCTCGTTCTCTCCGGCAGCGTCGTCGTCTTCTTCCTTCGCGTGCGCA
GCAGTCAGGCGGTTCGATCTTCTCGTTCTCTCCGGCAGCGTCTTCGCGTGCGCAGCAGTCAGGCGATTCGGCTTCGTCGTACACAGTGGTTCCTCAAGCTAATAGAGTTC
TCGTTCGTCTTGAGGAGCTTCCTGAGATTCTATCCATTGGAACAGAAGTTGGAGGGAGTGATATTGCACCTGGAAAGAAGGTTGTGTGA
Protein sequenceShow/hide protein sequence
MIVTGALDQHTTSFLLSAAPSSRSLRQRRRLLPSRAQQSGGSIFSFSPAASSRAQQSGDSASSYTVVPQANRVLVRLEELPEILSIGTEVGGSDIAPGKKVV