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Spg024599 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024599
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNBS-LRR type resistance protein
Genome locationscaffold12:19674889..19679449
RNA-Seq ExpressionSpg024599
SyntenySpg024599
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.4e-0656.72Show/hide
Query:  RPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        RPRGNR SLQ  +L KTVEIELP+ DTLPT AES  S SS                YF N+VMSGLH
Subjt:  RPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-0550Show/hide
Query:  RPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        RPRGNR+SLQ  EL KT                 VEIELPV DTLPTSAESS S SS                YF N+VMSGLH
Subjt:  RPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]4.9e-0554.55Show/hide
Query:  PRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        PRGNR SLQ  +L KTVEIELP+ DTLPTS+ESS S SS                YF  +VMS LH
Subjt:  PRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.4e-0655.71Show/hide
Query:  SFRPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSSYFPNRVMSGLH
        S +PRGN+ SLQ  EL KT                 VEIEL V DTLPTSAES  S SSYF N+VMSGLH
Subjt:  SFRPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSSYFPNRVMSGLH

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]5.2e-0755.56Show/hide
Query:  FHSFRPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLHP
        F +  PRGNR S Q  +L KTVEIELPV DTLPTSAESS S SS                Y  N+VMSGLHP
Subjt:  FHSFRPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLHP

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein2.1e-0656.72Show/hide
Query:  RPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        RPRGNR SLQ  +L KTVEIELP+ DTLPT AES  S SS                YF N+VMSGLH
Subjt:  RPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.4e-0550Show/hide
Query:  RPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        RPRGNR+SLQ  EL KT                 VEIELPV DTLPTSAESS S SS                YF N+VMSGLH
Subjt:  RPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

A0A5A7V2F2 Uncharacterized protein2.4e-0554.55Show/hide
Query:  PRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH
        PRGNR SLQ  +L KTVEIELP+ DTLPTS+ESS S SS                YF  +VMS LH
Subjt:  PRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLH

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein2.1e-0655.71Show/hide
Query:  SFRPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSSYFPNRVMSGLH
        S +PRGN+ SLQ  EL KT                 VEIEL V DTLPTSAES  S SSYF N+VMSGLH
Subjt:  SFRPRGNRSSLQARELAKT-----------------VEIELPVLDTLPTSAESSSSCSSYFPNRVMSGLH

A0A5D3BET3 Uncharacterized protein2.5e-0755.56Show/hide
Query:  FHSFRPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLHP
        F +  PRGNR S Q  +L KTVEIELPV DTLPTSAESS S SS                Y  N+VMSGLHP
Subjt:  FHSFRPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSS----------------YFPNRVMSGLHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGTTGTAGCAGCTGGCGCAATGAAAAGTTTGTTGCTGTAGCAAGGGATGTTTGTTGCTGTAGCAATGGAAAGCTTGTTGCTGTAGCAAGGGATGCTTGTTGCTT
TGGCTCAAAGCAAGACATGCTTTGGCTCAAAGCAACATATGCTTTGGCTCCAAGCAACACATATGCTTTGGCTCCAAGCAATAAAGATTCGACCCTGGAATACTCCAGAA
TTCATGAGCCACAAATGGCTAGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAGCAGAGAAGCTCGAATCTGTACTTGTTGTGTTCGGGGGATTGCTGGACATATC
TGTTTGGAATCTCGTTTTCATTCCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGGCCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCCCGGTGCTTGATACACT
GCCAACGTCTGCTGAAAGTTCCAGTTCATGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCCC
mRNA sequenceShow/hide mRNA sequence
ATGACATGTTGTAGCAGCTGGCGCAATGAAAAGTTTGTTGCTGTAGCAAGGGATGTTTGTTGCTGTAGCAATGGAAAGCTTGTTGCTGTAGCAAGGGATGCTTGTTGCTT
TGGCTCAAAGCAAGACATGCTTTGGCTCAAAGCAACATATGCTTTGGCTCCAAGCAACACATATGCTTTGGCTCCAAGCAATAAAGATTCGACCCTGGAATACTCCAGAA
TTCATGAGCCACAAATGGCTAGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAGCAGAGAAGCTCGAATCTGTACTTGTTGTGTTCGGGGGATTGCTGGACATATC
TGTTTGGAATCTCGTTTTCATTCCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGGCCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCCCGGTGCTTGATACACT
GCCAACGTCTGCTGAAAGTTCCAGTTCATGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCCC
Protein sequenceShow/hide protein sequence
MTCCSSWRNEKFVAVARDVCCCSNGKLVAVARDACCFGSKQDMLWLKATYALAPSNTYALAPSNKDSTLEYSRIHEPQMARSRFNFRRKIKGSREARICTCCVRGIAGHI
CLESRFHSFRPRGNRSSLQARELAKTVEIELPVLDTLPTSAESSSSCSSYFPNRVMSGLHP