; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024616 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024616
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGLTSCR1 domain-containing protein
Genome locationscaffold12:17170972..17171964
RNA-Seq ExpressionSpg024616
SyntenySpg024616
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140082.2 putative uncharacterized protein DDB_G0271606 [Cucumis sativus]1.4e-6593.25Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS
        MDEAKAMAA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ+QKQQQAQ QAAAISRFPSNIDAHLRPPGLH RPGSINLHQNPNPNPTASVSNLQ+NPS
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS

Query:  PSQPPSQQLQQQQQQQQH---LLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSQPPSQQLQQQQQQQQ     LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSQPPSQQLQQQQQQQQH---LLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

XP_008449378.1 PREDICTED: bromodomain-containing protein DDB_G0280777 [Cucumis melo]2.9e-6695.03Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS
        MDEAKAMAA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ+QKQQQAQ QAAAISRFPSNIDAHLRPPGLH RPGSINLHQNPNPNPTASVSNLQSNPS
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS

Query:  PSQPPSQQLQQQQQQQQHL-LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSQPPSQQLQQQQQQQ  L LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSQPPSQQLQQQQQQQQHL-LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

XP_022958641.1 putative mediator of RNA polymerase II transcription subunit 26 [Cucurbita moschata]1.1e-6089.29Show/hide
Query:  MDEAK--AMAA--QQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS
        MDEAK  AMAA  QQQLLLQQHK QQQQQQQQTQQHQQFLLLQQ+QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQN NPNP ASV NLQS
Subjt:  MDEAK--AMAA--QQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS

Query:  NPSPSQPPSQQL-----QQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        NPSP+QPPSQQL     QQQQQQQQH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  NPSPSQPPSQQL-----QQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

XP_022973214.1 ras-interacting protein RIP3 [Cucurbita maxima]1.5e-6291.98Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ--NPNPNPTASVSNLQSN
        MDEAKAMAA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ+QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQ  NPNPNPT SV NLQSN
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ--NPNPNPTASVSNLQSN

Query:  PSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSPSQPPSQQ  QQQQQ QH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

XP_038887907.1 involucrin [Benincasa hispida]1.4e-6594.38Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS
        MDEAKA+AA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQNPNPNPTASVSNLQSNPS
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS

Query:  PSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSQPPSQQL QQQQQQQH L QR MRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

TrEMBL top hitse value%identityAlignment
A0A1S3BL97 bromodomain-containing protein DDB_G02807771.4e-6695.03Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS
        MDEAKAMAA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ+QKQQQAQ QAAAISRFPSNIDAHLRPPGLH RPGSINLHQNPNPNPTASVSNLQSNPS
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPS

Query:  PSQPPSQQLQQQQQQQQHL-LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSQPPSQQLQQQQQQQ  L LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSQPPSQQLQQQQQQQQHL-LQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

A0A6J1EXS9 PH domain-containing protein DDB_G0275795-like6.7e-6188.69Show/hide
Query:  MDEAKAMAA--QQQLLLQQHK----QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ----NPNPNPTASV
        MDEAKAMAA  QQQLLLQQHK    QQQQQQQQTQQHQQFLLLQQ+QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQ    NPNPNPT SV
Subjt:  MDEAKAMAA--QQQLLLQQHK----QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ----NPNPNPTASV

Query:  SNLQSNPSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
         NLQSNPSPSQPPSQQ  QQQQQ QH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  SNLQSNPSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

A0A6J1H2M5 putative mediator of RNA polymerase II transcription subunit 265.2e-6189.29Show/hide
Query:  MDEAK--AMAA--QQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS
        MDEAK  AMAA  QQQLLLQQHK QQQQQQQQTQQHQQFLLLQQ+QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQN NPNP ASV NLQS
Subjt:  MDEAK--AMAA--QQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS

Query:  NPSPSQPPSQQL-----QQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        NPSP+QPPSQQL     QQQQQQQQH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  NPSPSQPPSQQL-----QQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

A0A6J1IDW9 ras-interacting protein RIP37.2e-6391.98Show/hide
Query:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ--NPNPNPTASVSNLQSN
        MDEAKAMAA  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQ+QKQQQAQQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQ  NPNPNPT SV NLQSN
Subjt:  MDEAKAMAA--QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQ--NPNPNPTASVSNLQSN

Query:  PSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        PSPSQPPSQQ  QQQQQ QH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  PSPSQPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

A0A6J1JY62 zinc finger protein 853-like7.0e-5888.48Show/hide
Query:  MDEAK--AMAA--QQQLLLQQH-KQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS
        MDEAK  AMAA  QQQLLLQQH KQQQQQQQQTQQHQQFLLLQQ+QK    QQQAAAISRFPSNIDAHLRPPGLH RPGSINLHQN NPNPTASV NLQS
Subjt:  MDEAK--AMAA--QQQLLLQQH-KQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQS

Query:  NPSPSQPPSQQLQQ--QQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        NPSP+QPPSQ LQQ  QQQQQQH LQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
Subjt:  NPSPSQPPSQQLQQ--QQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03460.1 unknown protein2.0e-2554.43Show/hide
Query:  MDEAKAMAAQQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPSPS
        M+E+K    QQQ LL    Q QQQQQ  Q+ QQ  L+Q +QKQ   QQQ AA+S FP N DAHLRPPGL          QN NPNP       +      
Subjt:  MDEAKAMAAQQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPSPS

Query:  QPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        Q     +QQQQ QQQ   QQ+ MRP NQ E+Q AYQDAWRVCHPD KRPF SLEDACE
Subjt:  QPPSQQLQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE

AT5G17510.1 unknown protein2.6e-2859.87Show/hide
Query:  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGL-HFRPGSINLHQNPNPNPT--ASVSNLQSNPSPSQPPSQQ
        QQQ LL QH+ QQQQ+Q     QQ LLLQQ+QKQ   QQQ AA+SRFPSNID HLRPPGL   RP +    QNP PNP       N Q     +    Q 
Subjt:  QQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGL-HFRPGSINLHQNPNPNPT--ASVSNLQSNPSPSQPPSQQ

Query:  LQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE
        +QQQQQQQQ   QQ+ MRP N  ELQ AYQDAWRVCHP+ K+PF SLEDACE
Subjt:  LQQQQQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGCTAAGGCAATGGCTGCTCAACAACAGCTACTCTTGCAACAGCACAAACAGCAACAGCAACAGCAGCAACAAACTCAGCAGCACCAGCAATTTCTTCTTCT
TCAACAAATGCAGAAACAGCAGCAGGCTCAGCAACAGGCTGCCGCCATCTCTCGCTTTCCTTCGAATATCGATGCCCATTTGCGCCCACCGGGTCTTCATTTCCGCCCTG
GATCCATTAACCTCCACCAAAACCCTAACCCTAATCCAACCGCGTCTGTTTCTAATTTGCAGTCTAACCCTAGTCCCAGTCAACCACCGTCTCAGCAATTGCAGCAGCAG
CAGCAACAGCAACAACACCTGCTGCAGCAGAGGGCAATGCGACCCGGGAACCAGGCGGAACTCCAGATGGCTTATCAGGATGCTTGGCGTGTTTGCCATCCTGACATTAA
GCGGCCTTTTGGTTCCCTTGAAGATGCTTGTGAGAGTAGATGCGATACCCCAGAATTCCTAATGAATATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGCTAAGGCAATGGCTGCTCAACAACAGCTACTCTTGCAACAGCACAAACAGCAACAGCAACAGCAGCAACAAACTCAGCAGCACCAGCAATTTCTTCTTCT
TCAACAAATGCAGAAACAGCAGCAGGCTCAGCAACAGGCTGCCGCCATCTCTCGCTTTCCTTCGAATATCGATGCCCATTTGCGCCCACCGGGTCTTCATTTCCGCCCTG
GATCCATTAACCTCCACCAAAACCCTAACCCTAATCCAACCGCGTCTGTTTCTAATTTGCAGTCTAACCCTAGTCCCAGTCAACCACCGTCTCAGCAATTGCAGCAGCAG
CAGCAACAGCAACAACACCTGCTGCAGCAGAGGGCAATGCGACCCGGGAACCAGGCGGAACTCCAGATGGCTTATCAGGATGCTTGGCGTGTTTGCCATCCTGACATTAA
GCGGCCTTTTGGTTCCCTTGAAGATGCTTGTGAGAGTAGATGCGATACCCCAGAATTCCTAATGAATATTGTTTGA
Protein sequenceShow/hide protein sequence
MDEAKAMAAQQQLLLQQHKQQQQQQQQTQQHQQFLLLQQMQKQQQAQQQAAAISRFPSNIDAHLRPPGLHFRPGSINLHQNPNPNPTASVSNLQSNPSPSQPPSQQLQQQ
QQQQQHLLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACESRCDTPEFLMNIV