CuGenDBv2

Gene ID	Spg024638
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ABC transporter C family member 2-like
Genome location	scaffold12:18109541..18112135
RNA-Seq Expression	Spg024638
Synteny	Spg024638
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

QIT08318.1 putative ABC transporter C family member 2-like protein [Siraitia grosvenorii]

8.0e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGDPSGIGY YAFSIFAGV  GVLCEAQY QNVMRVGFR+R+TL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

XP_008445683.2 PREDICTED: ABC transporter C family member 2-like [Cucumis melo]

6.1e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGD SGIGY YAFSIFAGVL GVLCEAQY QNVMRVGFR+RSTL +S+
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

XP_011656526.1 ABC transporter C family member 2 [Cucumis sativus]

2.3e-13

89.13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTL
        MQRGD SGIGY YAFSIFAGVL GVLCEAQY QNVMRVGFR+RSTL
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTL

XP_038723681.1 ABC transporter C family member 2-like isoform X1 [Tripterygium wilfordii]

3.0e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGDP+ IGY YAFSIF GV+FGVLCEAQY QNVMRVGFR+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

XP_038877680.1 ABC transporter C family member 2-like [Benincasa hispida]

6.1e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGD SGIGY YAFSIFAGVL GVLCEAQY QNVMRVGFR+RSTL +S+
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K897 ABC transmembrane type-1 domain-containing protein

1.1e-13

89.13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTL
        MQRGD SGIGY YAFSIFAGVL GVLCEAQY QNVMRVGFR+RSTL
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTL

A0A1S3BCT7 ABC transporter C family member 2-like

3.0e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGD SGIGY YAFSIFAGVL GVLCEAQY QNVMRVGFR+RSTL +S+
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

A0A6H0F2I9 Putative ABC transporter C family member 2-like protein

3.9e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGDPSGIGY YAFSIFAGV  GVLCEAQY QNVMRVGFR+R+TL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

A0A6J1EES4 ABC transporter C family member 2

1.5e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGDPS IGY YAFSIFAGV+FGVLCEAQY QNVMR G+R+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

A0A6J1KUZ1 ABC transporter C family member 2-like

1.5e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQRGDPS IGY YAFSIFAGV+FGVLCEAQY QNVMR G+R+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

SwissProt top hits

e value

%identity

Alignment

Q42093 ABC transporter C family member 2

1.6e-12

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ   P+ +GY YAFSIF GV+FGVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

Q9C8G9 ABC transporter C family member 1

7.8e-12

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ  +P+ IGY YA SIF GV+ GVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

Q9C8H0 ABC transporter C family member 12

3.2e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ GDP+ +GY YAF IF GV  GVLCEAQY QNV RVGFR+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

Q9C8H1 ABC transporter C family member 11

3.0e-11

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        M  GDP+ +GY YAF IF GV FGVLC++QY Q+V RVGFR+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

Arabidopsis top hits

e value

%identity

Alignment

AT1G30400.1 multidrug resistance-associated protein 1

5.5e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ  +P+ IGY YA SIF GV+ GVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

AT1G30400.2 multidrug resistance-associated protein 1

5.5e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ  +P+ IGY YA SIF GV+ GVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

AT1G30410.1 multidrug resistance-associated protein 13

2.2e-14

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ GDP+ +GY YAF IF GV  GVLCEAQY QNV RVGFR+RSTL +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

AT2G34660.1 multidrug resistance-associated protein 2

1.1e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ   P+ +GY YAFSIF GV+FGVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

AT2G34660.2 multidrug resistance-associated protein 2

1.1e-13

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Query:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL
        MQ   P+ +GY YAFSIF GV+FGVLCEAQY QNVMRVG+R+RS L +++
Subjt:  MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSL

Sequences

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CDS sequence

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ATGCAGCGTGGAGATCCATCTGGAATTGGCTACACTTATGCTTTCTCTATATTTGCAGGAGTGCTATTTGGAGTGTTATGTGAAGCACAATATCTTCAGAATGTGATGCG
TGTCGGTTTTCGAATGAGGTCAACCTTGTTTTCCAGCCTTCCTTTTGGTGTTCTTGCTGCCTTCTTTCCACGATGCAAGCGTACAGTTGATTCTTGTGGTGAGAGGACGG
CGATAGTTTCCGTCTCTTTTTCCGTCGATGTTGAATCTCCACCCACGTTGGTCGAGATCTTCTTGGATGCCATCGAGGAAGCGCCCAAAATTCACACGCTCTGA

mRNA sequence

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Protein sequence

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MQRGDPSGIGYTYAFSIFAGVLFGVLCEAQYLQNVMRVGFRMRSTLFSSLPFGVLAAFFPRCKRTVDSCGERTAIVSVSFSVDVESPPTLVEIFLDAIEEAPKIHTL

Spg024638 (gene) of Sponge gourd (cylindrica) v1 genome