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Spg024645 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024645
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold12:19899883..19902126
RNA-Seq ExpressionSpg024645
SyntenySpg024645
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-2553.68Show/hide
Query:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV
        +L+++  R+   E L++PRGNR  LQT+++ KT             PL TLSVL DNDAVVSAG+APLRQRRWEC  GP    TS   ++        S 
Subjt:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV

Query:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
         LVEIELPVPD LPTS ESSRS+S+TW+ELY ESV+
Subjt:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

KAA0053207.1 hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa]4.9e-1539.64Show/hide
Query:  VYKLNQKLYLVSCRVFENEE---------------------------LDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAP
        +YKLNQKLYLVSC VFENEE                           L++PRGNR  LQT +L KT             PL TLSVLRDNDAV       
Subjt:  VYKLNQKLYLVSCRVFENEE---------------------------LDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAP

Query:  LRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
                                           VEIELP P+ LPTS ESSRS+S+TW+ELY E V+
Subjt:  LRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]2.9e-2349.43Show/hide
Query:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV
        LP S E S     F  S +  +FL F +      V K NQKLYLV            PRGNRS LQT +L KT              L TLSVLRDNDAV
Subjt:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV

Query:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT
        VSAG     +        PLHRRTSKR LYWACPT RRSVML          VEIEL VPDTLPTS ESS S+S +
Subjt:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]2.9e-2349.43Show/hide
Query:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV
        LP S E S     F  S +  +FL F +      V K NQKLYLV            PRGNRS LQT +L KT              L TLSVLRDNDAV
Subjt:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV

Query:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT
        VSAG     +        PLHRRTSKR LYWACPT RRSVML          VEIEL VPDTLPTS ESS S+S +
Subjt:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-2553.68Show/hide
Query:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV
        +L+++  R+   E L++PRGNR  LQT+++ KT             PL TLSVL DNDAVVSAG+APLRQRRWEC  GP    TS   ++        S 
Subjt:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV

Query:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
         LVEIELPVPD LPTS ESSRS+S+TW+ELY ESV+
Subjt:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase8.7e-2653.68Show/hide
Query:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV
        +L+++  R+   E L++PRGNR  LQT+++ KT             PL TLSVL DNDAVVSAG+APLRQRRWEC  GP    TS   ++        S 
Subjt:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV

Query:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
         LVEIELPVPD LPTS ESSRS+S+TW+ELY ESV+
Subjt:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

A0A5A7UFD2 Uncharacterized protein2.4e-1539.64Show/hide
Query:  VYKLNQKLYLVSCRVFENEE---------------------------LDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAP
        +YKLNQKLYLVSC VFENEE                           L++PRGNR  LQT +L KT             PL TLSVLRDNDAV       
Subjt:  VYKLNQKLYLVSCRVFENEE---------------------------LDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAP

Query:  LRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
                                           VEIELP P+ LPTS ESSRS+S+TW+ELY E V+
Subjt:  LRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

A0A5A7VGQ5 Uncharacterized protein1.4e-2349.43Show/hide
Query:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV
        LP S E S     F  S +  +FL F +      V K NQKLYLV            PRGNRS LQT +L KT              L TLSVLRDNDAV
Subjt:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV

Query:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT
        VSAG     +        PLHRRTSKR LYWACPT RRSVML          VEIEL VPDTLPTS ESS S+S +
Subjt:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT

A0A5D3BG85 Uncharacterized protein1.4e-2349.43Show/hide
Query:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV
        LP S E S     F  S +  +FL F +      V K NQKLYLV            PRGNRS LQT +L KT              L TLSVLRDNDAV
Subjt:  LPESSESSPKHRIFEQSRRISDFLWFFEHSG---VYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAV

Query:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT
        VSAG     +        PLHRRTSKR LYWACPT RRSVML          VEIEL VPDTLPTS ESS S+S +
Subjt:  VSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVML----------VEIELPVPDTLPTSTESSRSSSNT

A0A5D3BTP3 Reverse transcriptase8.7e-2653.68Show/hide
Query:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV
        +L+++  R+   E L++PRGNR  LQT+++ KT             PL TLSVL DNDAVVSAG+APLRQRRWEC  GP    TS   ++        S 
Subjt:  KLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSV

Query:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY
         LVEIELPVPD LPTS ESSRS+S+TW+ELY ESV+
Subjt:  MLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGTTTGGAATTACCTCTCGGAAAACTCCATTCGGCTGGAATGCAGTTGAAGTTGTTCTTGTATGTTGTGGATGCCGCACACCAAACCACCTTGGCACGCTTCCTGAGTC
ATCTGAATCGTCGCCAAAGCACAGGATTTTCGAGCAAAGCAGAAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATT
TGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGCCAAGAGGAAATAGGTCGGGTCTACAAACCAAGAAACTAGCTAAGACTCCCGAGGCTATATGGTACCGT
GTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGC
GGGCCCACTACATCGTAGGACTAGTAAACGTTTGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGC
CAACGTCTACTGAAAGCTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ACGTTTGGAATTACCTCTCGGAAAACTCCATTCGGCTGGAATGCAGTTGAAGTTGTTCTTGTATGTTGTGGATGCCGCACACCAAACCACCTTGGCACGCTTCCTGAGTC
ATCTGAATCGTCGCCAAAGCACAGGATTTTCGAGCAAAGCAGAAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATT
TGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGCCAAGAGGAAATAGGTCGGGTCTACAAACCAAGAAACTAGCTAAGACTCCCGAGGCTATATGGTACCGT
GTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGC
GGGCCCACTACATCGTAGGACTAGTAAACGTTTGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGC
CAACGTCTACTGAAAGCTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
TFGITSRKTPFGWNAVEVVLVCCGCRTPNHLGTLPESSESSPKHRIFEQSRRISDFLWFFEHSGVYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYR
VHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVYYVNVL