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Spg024647 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024647
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:19786617..19788914
RNA-Seq ExpressionSpg024647
SyntenySpg024647
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-1435.48Show/hide
Query:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC
        TVLE V + GA+W +S     T   + L   A  W  F++  L PTTH  TVS++R+LL  ++L    INVG++I  EI  C   K G LFFP+ I+  C
Subjt:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC

Query:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDG
        + A  P    +  L + G ID   +A + +   T+  +  S S     S  +T+G
Subjt:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.3e-1432.97Show/hide
Query:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC
        TVLE V   GA+W +S     T   + L   A  W  F++ RL PTTH  TVS++R+LL  ++L    INVG++I  EI  C   K G LFFP+ I+  C
Subjt:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC

Query:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDGHEVFVCSPSSRRSEADGRGSSHLSSLI
        + A  P    +  L + G ID   +A + +   T+  +  S S     S  +T+G  +       +R         H+ SL+
Subjt:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDGHEVFVCSPSSRRSEADGRGSSHLSSLI

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]8.2e-1437.58Show/hide
Query:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP
        A VLE V I GA+W +S     T   + L   A  W  F++ RL PTTH   VS+ERVLL +++L    IN+G++I  EI  C   K G LFFP+ I   
Subjt:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP

Query:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEP
        C+ A  P    +  L + G ID   +A   R  +   +  SH+   S P
Subjt:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEP

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.2e-1438.67Show/hide
Query:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP
        ATVLE V I GA+W +S     T   + L   A  W  F++ RL PTTH  TVS+ERVLL +++L    INVG+II  EI      K G LFFP+ I+  
Subjt:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP

Query:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPK
        C  A  P    +  L + G ID   +A +     A++    H  R S  +
Subjt:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPK

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]5.5e-1839.1Show/hide
Query:  EVGIEGAQWRL-SKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPCKRA
        E+G  G +W   S    RT++A+ LK  AN W+ FIR  L PTTHDS++S E+++L + ++    INVGK++   I YC + + GKLFFP+ I     +A
Subjt:  EVGIEGAQWRL-SKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPCKRA

Query:  GVPESAEDVILL---DKGIIDTPNLAWLQRTQE
        GVPE  +D+++    +K  ID   ++ L+   E
Subjt:  GVPESAEDVILL---DKGIIDTPNLAWLQRTQE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1435.48Show/hide
Query:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC
        TVLE V + GA+W +S     T   + L   A  W  F++  L PTTH  TVS++R+LL  ++L    INVG++I  EI  C   K G LFFP+ I+  C
Subjt:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC

Query:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDG
        + A  P    +  L + G ID   +A + +   T+  +  S S     S  +T+G
Subjt:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDG

A0A2P5BCG4 Uncharacterized protein (Fragment)3.0e-1432.97Show/hide
Query:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC
        TVLE V   GA+W +S     T   + L   A  W  F++ RL PTTH  TVS++R+LL  ++L    INVG++I  EI  C   K G LFFP+ I+  C
Subjt:  TVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMPC

Query:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDGHEVFVCSPSSRRSEADGRGSSHLSSLI
        + A  P    +  L + G ID   +A + +   T+  +  S S     S  +T+G  +       +R         H+ SL+
Subjt:  KRAGVPESAEDVILLDKGIIDTPNLAWLQR---TQEARDSSCSHERRGSEPKTDGHEVFVCSPSSRRSEADGRGSSHLSSLI

A0A2P5BNT0 Uncharacterized protein (Fragment)4.0e-1437.58Show/hide
Query:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP
        A VLE V I GA+W +S     T   + L   A  W  F++ RL PTTH   VS+ERVLL +++L    IN+G++I  EI  C   K G LFFP+ I   
Subjt:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP

Query:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEP
        C+ A  P    +  L + G ID   +A   R  +   +  SH+   S P
Subjt:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEP

A0A2P5CPE8 Uncharacterized protein1.0e-1438.67Show/hide
Query:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP
        ATVLE V I GA+W +S     T   + L   A  W  F++ RL PTTH  TVS+ERVLL +++L    INVG+II  EI      K G LFFP+ I+  
Subjt:  ATVLE-VGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP

Query:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPK
        C  A  P    +  L + G ID   +A +     A++    H  R S  +
Subjt:  CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPK

W9QTD9 Uncharacterized protein1.2e-1331.29Show/hide
Query:  AAAPSNEQLNATVLEVGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYC-WRNKVGK
        A+  ++EQL   + EV IEGA W++S     T     LK+ A  W  F+  R  P+TH  TV+++RVLL ++IL  + +N+ +I   EI  C    K G 
Subjt:  AAAPSNEQLNATVLEVGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYC-WRNKVGK

Query:  LFFPNTISMPCKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPKTDG
        L+FP+ I+    +A VP   ++ I+ + G I T +++ + + +    +     R G+     G
Subjt:  LFFPNTISMPCKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPKTDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGCACCATCTAACGAGCAGTTGAATGCTACTGTTCTGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTCTCAAAAACTAAGAAGAGGACATTCCAGGCCGC
CTATCTGAAGAAAGAAGCCAACACTTGGATGGGATTTATCAGGCAGAGGCTGCCTCCAACAACTCATGACTCCACAGTCTCTCGGGAACGCGTTCTTCTGGCTTTTGCAA
TCCTAAGGTCTCTTGGCATCAATGTAGGTAAGATTATCTCTGGTGAAATTTTTTATTGTTGGCGTAATAAGGTTGGGAAATTGTTCTTTCCAAACACAATCTCAATGCCT
TGTAAAAGAGCGGGGGTTCCAGAAAGTGCAGAAGATGTGATCCTATTGGACAAGGGAATAATTGACACGCCAAACTTGGCATGGCTTCAGCGGACACAGGAAGCACGTGA
TAGCAGCTGCTCTCATGAACGTCGTGGATCTGAACCGAAAACGGATGGCCATGAAGTTTTCGTCTGTTCGCCGTCAAGCCGCAGATCTGAAGCTGATGGTCGTGGGTCTA
GTCATCTCTCGTCTCTGATCTCTCCCGTAAACTGCAGGTCGTGGGAACCGAGGATCGACAACCCCGAACAGAGCCGACGTTCACGAACAAACCCCGAACAGCGCGGTGTT
CACGAACCCATGCCCTTTTCGACCGCAGATCTACAACCAATGCCCTTCACGAACCCACGCCGGCGTTCACGAGTAGCAGCTCCACGACAAACGGACGAGAGCAGCACTAG
CGTCGCGAAGCTAGGAGGACAGCGTCGTGACGCTGTCCTATTCTTGCTGCACAAGACATCAGTGACGTCACAGCGTCGCGACGTTGTGACGTCATCGTCGCGACGCTGCC
CCATTTCCAGGCCTATAAAAGGCGCGTTTTGGCTCCCCATTTTGGCATCAATCATCATTCCATTTCCTTTCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGCACCATCTAACGAGCAGTTGAATGCTACTGTTCTGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTCTCAAAAACTAAGAAGAGGACATTCCAGGCCGC
CTATCTGAAGAAAGAAGCCAACACTTGGATGGGATTTATCAGGCAGAGGCTGCCTCCAACAACTCATGACTCCACAGTCTCTCGGGAACGCGTTCTTCTGGCTTTTGCAA
TCCTAAGGTCTCTTGGCATCAATGTAGGTAAGATTATCTCTGGTGAAATTTTTTATTGTTGGCGTAATAAGGTTGGGAAATTGTTCTTTCCAAACACAATCTCAATGCCT
TGTAAAAGAGCGGGGGTTCCAGAAAGTGCAGAAGATGTGATCCTATTGGACAAGGGAATAATTGACACGCCAAACTTGGCATGGCTTCAGCGGACACAGGAAGCACGTGA
TAGCAGCTGCTCTCATGAACGTCGTGGATCTGAACCGAAAACGGATGGCCATGAAGTTTTCGTCTGTTCGCCGTCAAGCCGCAGATCTGAAGCTGATGGTCGTGGGTCTA
GTCATCTCTCGTCTCTGATCTCTCCCGTAAACTGCAGGTCGTGGGAACCGAGGATCGACAACCCCGAACAGAGCCGACGTTCACGAACAAACCCCGAACAGCGCGGTGTT
CACGAACCCATGCCCTTTTCGACCGCAGATCTACAACCAATGCCCTTCACGAACCCACGCCGGCGTTCACGAGTAGCAGCTCCACGACAAACGGACGAGAGCAGCACTAG
CGTCGCGAAGCTAGGAGGACAGCGTCGTGACGCTGTCCTATTCTTGCTGCACAAGACATCAGTGACGTCACAGCGTCGCGACGTTGTGACGTCATCGTCGCGACGCTGCC
CCATTTCCAGGCCTATAAAAGGCGCGTTTTGGCTCCCCATTTTGGCATCAATCATCATTCCATTTCCTTTCCTTTAG
Protein sequenceShow/hide protein sequence
MAAAPSNEQLNATVLEVGIEGAQWRLSKTKKRTFQAAYLKKEANTWMGFIRQRLPPTTHDSTVSRERVLLAFAILRSLGINVGKIISGEIFYCWRNKVGKLFFPNTISMP
CKRAGVPESAEDVILLDKGIIDTPNLAWLQRTQEARDSSCSHERRGSEPKTDGHEVFVCSPSSRRSEADGRGSSHLSSLISPVNCRSWEPRIDNPEQSRRSRTNPEQRGV
HEPMPFSTADLQPMPFTNPRRRSRVAAPRQTDESSTSVAKLGGQRRDAVLFLLHKTSVTSQRRDVVTSSSRRCPISRPIKGAFWLPILASIIIPFPFL