; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024655 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024655
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold12:15589330..15590624
RNA-Seq ExpressionSpg024655
SyntenySpg024655
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]4.4e-2033.49Show/hide
Query:  PHFLRVGITNHGWELFCSKPDLVNSQVVREFYAN-IDENEDF----QVIVHFLHAGYN-------------EMVVAPSNEQLNDAAREVGIEGAQWRLSK
        P F+   I  HGW  FC  P      +VREFYAN +D N++      V V F     N             +     ++EQL     EV IEGA W++S 
Subjt:  PHFLRVGITNHGWELFCSKPDLVNSQVVREFYAN-IDENEDF----QVIVHFLHAGYN-------------EMVVAPSNEQLNDAAREVGIEGAQWRLSK

Query:  IEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFG-RWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLD
            T     LK+ A  W  F+  R  P+THG TV+++RVLL ++ L  +S+++ +I + EI       K G L+FP+ IT L+ +A VP   ++ I+ +
Subjt:  IEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFG-RWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLD

Query:  KGVIDTPNLARL
         G I T +++R+
Subjt:  KGVIDTPNLARL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.4e-2030.23Show/hide
Query:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN
        RV  +     +F    A  +Y + ++ R    E+GF+       G LP   +V IT H W+ FC+ P+     +VREFYAN+ +  +  V V  +   ++
Subjt:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN

Query:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID
        E  +                    +   L      V + GA+W +S     T   + L   A  W  F+K    PTTHG TVS++R+LL  + L   SI+
Subjt:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID

Query:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL
        VG++I  EI      K G LFFP+ IT L + A  P    +  L + G ID   +AR+
Subjt:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.2e-2131.01Show/hide
Query:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN
        RV  +     +F    A  +Y + ++ R    E+GF+       G LP   +V IT H W+ FC+ P+     +VREFYAN+ + E+  V V  +   ++
Subjt:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN

Query:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID
        E  +                    + + L      V   GA+W +S     T   + L   A  W  F+K R  PTTHG TVS++R+LL  + L   SI+
Subjt:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID

Query:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL
        VG++I  EI      K G LFFP+ IT L + A  P    +  L + G ID   +AR+
Subjt:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.7e-1730.39Show/hide
Query:  LKRDFLFERGFIGDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHA------------------GYNEMVVAPSNEQLNDA
        ++++F+++     + P F+   I  H W+LFC+ P+     +VREFY N+   +D  V +  +                     ++E V   +  +L   
Subjt:  LKRDFLFERGFIGDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHA------------------GYNEMVVAPSNEQLNDA

Query:  AREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKR
           V I GA+W +S     T   + L   A  W  F+K R  PTTHG TVS+E V L ++ L   SI+VG++I  EI      K G LFFP+ IT + + 
Subjt:  AREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKR

Query:  AGVP
           P
Subjt:  AGVP

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]2.3e-1626.32Show/hide
Query:  EDIVKDPPRRRRKQKAGRVKRIWTNTPSPPLTDSEKEESGNQEEIGKKIAEDETEMKNGKDKDKGIVGVRVEERGLPYERFINHFARAKYIDMLKRDFLF
        E++      R+R  +  R+ RI T +      DSE+ E+  +E   ++    E + + G        G+ ++    P   F    AR  Y+   ++  + 
Subjt:  EDIVKDPPRRRRKQKAGRVKRIWTNTPSPPLTDSEKEESGNQEEIGKKIAEDETEMKNGKDKDKGIVGVRVEERGLPYERFINHFARAKYIDMLKRDFLF

Query:  ERGFIGDL---PHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGY-----NEM--VVAPS------------NEQLNDAARE
        ++GF   L      ++  I + GWE  C  P+  N   VREF   +   +  ++ V      Y     N++  ++ PS            +E+L+    +
Subjt:  ERGFIGDL---PHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGY-----NEM--VVAPS------------NEQLNDAARE

Query:  VGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGV
        V  EG  W   K   R  +  YLK EAN W  F++   HP +H + +  ERVL+ +  L +   DVG++I   I        GKL +P+ I  L ++A V
Subjt:  VGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGV

Query:  PKSTEDVILLDKGVIDTPNLARL
            +DV+ ++K  ID  NL RL
Subjt:  PKSTEDVILLDKGVIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.1e-2030.23Show/hide
Query:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN
        RV  +     +F    A  +Y + ++ R    E+GF+       G LP   +V IT H W+ FC+ P+     +VREFYAN+ +  +  V V  +   ++
Subjt:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN

Query:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID
        E  +                    +   L      V + GA+W +S     T   + L   A  W  F+K    PTTHG TVS++R+LL  + L   SI+
Subjt:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID

Query:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL
        VG++I  EI      K G LFFP+ IT L + A  P    +  L + G ID   +AR+
Subjt:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)2.5e-2131.01Show/hide
Query:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN
        RV  +     +F    A  +Y + ++ R    E+GF+       G LP   +V IT H W+ FC+ P+     +VREFYAN+ + E+  V V  +   ++
Subjt:  RVEERGLPYERFINHFARAKYIDMLK-RDFLFERGFI-------GDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYN

Query:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID
        E  +                    + + L      V   GA+W +S     T   + L   A  W  F+K R  PTTHG TVS++R+LL  + L   SI+
Subjt:  EMVVAP------------------SNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSID

Query:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL
        VG++I  EI      K G LFFP+ IT L + A  P    +  L + G ID   +AR+
Subjt:  VGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL

A0A2P5DAQ2 Uncharacterized protein1.3e-1730.39Show/hide
Query:  LKRDFLFERGFIGDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHA------------------GYNEMVVAPSNEQLNDA
        ++++F+++     + P F+   I  H W+LFC+ P+     +VREFY N+   +D  V +  +                     ++E V   +  +L   
Subjt:  LKRDFLFERGFIGDLPHFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHA------------------GYNEMVVAPSNEQLNDA

Query:  AREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKR
           V I GA+W +S     T   + L   A  W  F+K R  PTTHG TVS+E V L ++ L   SI+VG++I  EI      K G LFFP+ IT + + 
Subjt:  AREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKR

Query:  AGVP
           P
Subjt:  AGVP

A0A6A2ZUE4 Uncharacterized protein3.2e-1627.71Show/hide
Query:  FINHFARAKYIDMLKRDFLFERGFIGDLPHFLRVG------ITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYNEMVV------APS
        F++  A+  Y  +  R   FE GF+        +G      +T H W+ F   P  VN+ +V+EFY+NI E     V+V  +   +    +        +
Subjt:  FINHFARAKYIDMLKRDFLFERGFIGDLPHFLRVG------ITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYNEMVV------APS

Query:  NEQLNDAAREVGIE------------GAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRW
        ++     A+EV  E            G +W   +++++T     L      W  F+K +  PT+H +TVS +R+LL  + L   +ID+GKIIV       
Subjt:  NEQLNDAAREVGIE------------GAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRW

Query:  RMKVGKLFFPNTITMLYKRAGVPKSTEDVIL
        + +   L FPN IT L ++  V +   D IL
Subjt:  RMKVGKLFFPNTITMLYKRAGVPKSTEDVIL

W9QTD9 Uncharacterized protein2.1e-2033.49Show/hide
Query:  PHFLRVGITNHGWELFCSKPDLVNSQVVREFYAN-IDENEDF----QVIVHFLHAGYN-------------EMVVAPSNEQLNDAAREVGIEGAQWRLSK
        P F+   I  HGW  FC  P      +VREFYAN +D N++      V V F     N             +     ++EQL     EV IEGA W++S 
Subjt:  PHFLRVGITNHGWELFCSKPDLVNSQVVREFYAN-IDENEDF----QVIVHFLHAGYN-------------EMVVAPSNEQLNDAAREVGIEGAQWRLSK

Query:  IEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFG-RWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLD
            T     LK+ A  W  F+  R  P+THG TV+++RVLL ++ L  +S+++ +I + EI       K G L+FP+ IT L+ +A VP   ++ I+ +
Subjt:  IEKRTFQAAYLKKEANTWMGFIKQRPHPTTHGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFG-RWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLD

Query:  KGVIDTPNLARL
         G I T +++R+
Subjt:  KGVIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACGAGAGGAAAGATAGAGAGAGAAGTGGAGGAGAATGTGCCTACTACGCCAGAAGTCTCTAAAAAGAAAGCGAAGAAGAAAAGAATGCCTGTAGAAAGGGA
AGTCAAACAACTTAAAAGACTTCAAGAAGCTGAAGTTTCCGAAGTACTAGAGAAGGTACCAGAGGACATTGCTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTA
AAAAAGAGAAGGATTCTGAGAGGATTGGAGGAACGGAGCAAGAGAGTCAAGAAAAGGCCGCAATAGGTTTGCAAGGGCCAGGTACTAATAAAACAGTAGGGCAAGAGATT
TTGGAAGACATAGTGAAGGATCCGCCACGCCGCCGTCGTAAGCAGAAAGCAGGGCGAGTAAAGAGGATCTGGACCAACACTCCATCTCCTCCTTTGACTGACTCAGAGAA
AGAAGAATCTGGAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACTGAGATGAAAAATGGTAAGGATAAGGACAAAGGTATTGTAGGAGTCAGGGTTGAAG
AAAGGGGGTTGCCTTATGAGCGCTTTATCAATCATTTTGCCAGGGCAAAATATATTGACATGTTAAAGAGAGATTTCCTGTTCGAGAGAGGGTTCATTGGTGATCTTCCG
CATTTTCTGAGGGTTGGCATCACAAACCATGGCTGGGAGTTATTCTGTTCCAAGCCAGATCTTGTGAATTCTCAAGTGGTGCGAGAATTCTATGCGAACATTGACGAGAA
CGAGGATTTCCAAGTTATAGTTCATTTCCTGCACGCTGGGTACAATGAGATGGTAGTAGCACCATCTAATGAGCAGTTGAATGATGCAGCTAGGGAAGTTGGAATAGAAG
GTGCACAGTGGCGACTATCGAAAATCGAGAAAAGGACTTTTCAGGCTGCGTATTTAAAGAAGGAAGCCAATACTTGGATGGGGTTTATCAAACAAAGGCCGCATCCAACA
ACGCATGGCTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAAAACTGCGGTCCCTTAGCATCGATGTGGGTAAAATTATTGTTGGTGAAATTTTTGGACGATG
GAGAATGAAGGTGGGAAAGCTATTCTTTCCAAACACAATTACAATGCTTTATAAGAGAGCAGGGGTTCCAAAGAGTACAGAGGACGTGATCCTACTAGATAAGGGAGTAA
TTGACACACCTAACTTGGCACGACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACGAGAGGAAAGATAGAGAGAGAAGTGGAGGAGAATGTGCCTACTACGCCAGAAGTCTCTAAAAAGAAAGCGAAGAAGAAAAGAATGCCTGTAGAAAGGGA
AGTCAAACAACTTAAAAGACTTCAAGAAGCTGAAGTTTCCGAAGTACTAGAGAAGGTACCAGAGGACATTGCTGAAGAAGTAATCGCTGAGGAAGAACCAAAAGATTCTA
AAAAAGAGAAGGATTCTGAGAGGATTGGAGGAACGGAGCAAGAGAGTCAAGAAAAGGCCGCAATAGGTTTGCAAGGGCCAGGTACTAATAAAACAGTAGGGCAAGAGATT
TTGGAAGACATAGTGAAGGATCCGCCACGCCGCCGTCGTAAGCAGAAAGCAGGGCGAGTAAAGAGGATCTGGACCAACACTCCATCTCCTCCTTTGACTGACTCAGAGAA
AGAAGAATCTGGAAATCAAGAAGAGATTGGGAAGAAGATTGCAGAAGATGAAACTGAGATGAAAAATGGTAAGGATAAGGACAAAGGTATTGTAGGAGTCAGGGTTGAAG
AAAGGGGGTTGCCTTATGAGCGCTTTATCAATCATTTTGCCAGGGCAAAATATATTGACATGTTAAAGAGAGATTTCCTGTTCGAGAGAGGGTTCATTGGTGATCTTCCG
CATTTTCTGAGGGTTGGCATCACAAACCATGGCTGGGAGTTATTCTGTTCCAAGCCAGATCTTGTGAATTCTCAAGTGGTGCGAGAATTCTATGCGAACATTGACGAGAA
CGAGGATTTCCAAGTTATAGTTCATTTCCTGCACGCTGGGTACAATGAGATGGTAGTAGCACCATCTAATGAGCAGTTGAATGATGCAGCTAGGGAAGTTGGAATAGAAG
GTGCACAGTGGCGACTATCGAAAATCGAGAAAAGGACTTTTCAGGCTGCGTATTTAAAGAAGGAAGCCAATACTTGGATGGGGTTTATCAAACAAAGGCCGCATCCAACA
ACGCATGGCTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAAAACTGCGGTCCCTTAGCATCGATGTGGGTAAAATTATTGTTGGTGAAATTTTTGGACGATG
GAGAATGAAGGTGGGAAAGCTATTCTTTCCAAACACAATTACAATGCTTTATAAGAGAGCAGGGGTTCCAAAGAGTACAGAGGACGTGATCCTACTAGATAAGGGAGTAA
TTGACACACCTAACTTGGCACGACTTTAG
Protein sequenceShow/hide protein sequence
MAKTRGKIEREVEENVPTTPEVSKKKAKKKRMPVEREVKQLKRLQEAEVSEVLEKVPEDIAEEVIAEEEPKDSKKEKDSERIGGTEQESQEKAAIGLQGPGTNKTVGQEI
LEDIVKDPPRRRRKQKAGRVKRIWTNTPSPPLTDSEKEESGNQEEIGKKIAEDETEMKNGKDKDKGIVGVRVEERGLPYERFINHFARAKYIDMLKRDFLFERGFIGDLP
HFLRVGITNHGWELFCSKPDLVNSQVVREFYANIDENEDFQVIVHFLHAGYNEMVVAPSNEQLNDAAREVGIEGAQWRLSKIEKRTFQAAYLKKEANTWMGFIKQRPHPT
THGSTVSRERVLLAFAKLRSLSIDVGKIIVGEIFGRWRMKVGKLFFPNTITMLYKRAGVPKSTEDVILLDKGVIDTPNLARL