; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024657 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024657
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold12:16785167..16787918
RNA-Seq ExpressionSpg024657
SyntenySpg024657
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.8e-0841.28Show/hide
Query:  AVVRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVER
        A+V+GKMV+F    +N +Y ++     +P      K PS   M+ AL+ VA  G++W  +  K   L P +LK  ++V L FIK  LM T +D TIS+ER
Subjt:  AVVRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVER

Query:  VMLLYSIMK
        +MLLY IM+
Subjt:  VMLLYSIMK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.8e-0735.4Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL
        VRG  VS+S   IN V+ +  P+    ++ I+N + + +   L+ VA  G +W  S   A T + S L P + V  HF+K+RL+ TT+  T+S +R++LL
Subjt:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL

Query:  YSIMKGMKIVPGK
        +S++ G  I  G+
Subjt:  YSIMKGMKIVPGK

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]4.0e-0838.26Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM
        VRG  V  S+  IN +Y +  P+  H    +AI  P   ++   L+ VA  G +W  S   A T + S L P + V  HF+K+RL+ TT+  T+S ERV+
Subjt:  VRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM

Query:  LLYSIMKGMKIVPGK
        LLYS++ G  I  G+
Subjt:  LLYSIMKGMKIVPGK

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.8e-0933.63Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL
        ++ + VSFS+ DIN +Y++K   +  GN  I +P+ +QM++AL+++   G++W  S     TL    L  +  + ++ +K RL+ TT+D T+S +RVM  
Subjt:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL

Query:  YSIMKGMKIVPGK
        Y I++ + I  G+
Subjt:  YSIMKGMKIVPGK

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]7.3e-1035.45Show/hide
Query:  VVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVML
        +++G +V FS+ DIN +Y++K      GN  I +P  ++M++AL+ +   G QW  S    KTL  S L P++ + ++ +K R++ T++D T+S +RVM 
Subjt:  VVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVML

Query:  LYSIMKGMKI
         Y I  G+ I
Subjt:  LYSIMKGMKI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-0735.4Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL
        VRG  VS+S   IN V+ +  P+    ++ I+N + + +   L+ VA  G +W  S   A T + S L P + V  HF+K+RL+ TT+  T+S +R++LL
Subjt:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL

Query:  YSIMKGMKIVPGK
        +S++ G  I  G+
Subjt:  YSIMKGMKIVPGK

A0A2P5CPE8 Uncharacterized protein1.9e-0838.26Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM
        VRG  V  S+  IN +Y +  P+  H    +AI  P   ++   L+ VA  G +W  S   A T + S L P + V  HF+K+RL+ TT+  T+S ERV+
Subjt:  VRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM

Query:  LLYSIMKGMKIVPGK
        LLYS++ G  I  G+
Subjt:  LLYSIMKGMKIVPGK

A0A2P5DXM3 Uncharacterized protein6.2e-0734.51Show/hide
Query:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL
        VRG  VS+S   IN V+ +  P+    ++ I+N +  ++   L+ VA  G +W  S   A T + S L P + V  HF+K+RL+ TT+   +S +R++LL
Subjt:  VRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLL

Query:  YSIMKGMKIVPGK
        +S++ G  I  G+
Subjt:  YSIMKGMKIVPGK

A0A5A7TZE0 Protein MNN4-like8.7e-0941.28Show/hide
Query:  AVVRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVER
        A+V+GKMV+F    +N +Y ++     +P      K PS   M+ AL+ VA  G++W  +  K   L P +LK  ++V L FIK  LM T +D TIS+ER
Subjt:  AVVRGKMVSFSSVDINRVYRIKAPL--HPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVER

Query:  VMLLYSIMK
        +MLLY IM+
Subjt:  VMLLYSIMK

A0A5A7U0U4 Uncharacterized protein3.7e-0733.91Show/hide
Query:  AVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM
        A V+GK ++F    IN +Y +K   +  G+   KNP  + ++EAL+     G +W +  +    L P +L  +++V L FIK  +M T +D  IS+ER+M
Subjt:  AVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVM

Query:  LLYSIMKGMKIVPGK
        LLY I+  + +  G+
Subjt:  LLYSIMKGMKIVPGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGCGGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGGGTATATCGGATCAAGGCACCCTTGCATCCAAGAGGGAATGATGCCATCAA
GAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAAAATGGTGGCCAACAAAGGAGTTCAATGGAAAGAGTCTCAATCAAAGGCGAAGACATTAGTGCCTAGTGATCTCA
AGCCAAAATCAGCAGTGTGCCTTCACTTTATCAAGAACAGACTGATGCTCACAACCAACGACGGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAG
GGGATGAAGATAGTTCCTGGAAAAGATGAGGAACGTCACTTTTTCAAGCCAACTATTGACCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAGGAAAA
AGCTTCCACTTCCCAAGCTACTTCACCATCGGGGTTGACACTAGAACGGATCGAAGATAAGCTTAAAGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAGCTATTAGAG
AGTTCTACCTCTCTATCGCCCCTAGCATTGCCCCAAGCATCCCCCCATGTTCCCTGACTTCCATCAATCGCTGCTGCCTCAAGAAGAGAAAGAATCTGACAAAGATGAAG
ATGAAGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGAATGAGGAATATGGGAGTTTTTCTGATCCCCTTTATCTGCTATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGCGGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGGGTATATCGGATCAAGGCACCCTTGCATCCAAGAGGGAATGATGCCATCAA
GAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAAAATGGTGGCCAACAAAGGAGTTCAATGGAAAGAGTCTCAATCAAAGGCGAAGACATTAGTGCCTAGTGATCTCA
AGCCAAAATCAGCAGTGTGCCTTCACTTTATCAAGAACAGACTGATGCTCACAACCAACGACGGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAG
GGGATGAAGATAGTTCCTGGAAAAGATGAGGAACGTCACTTTTTCAAGCCAACTATTGACCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAGGAAAA
AGCTTCCACTTCCCAAGCTACTTCACCATCGGGGTTGACACTAGAACGGATCGAAGATAAGCTTAAAGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAGCTATTAGAG
AGTTCTACCTCTCTATCGCCCCTAGCATTGCCCCAAGCATCCCCCCATGTTCCCTGACTTCCATCAATCGCTGCTGCCTCAAGAAGAGAAAGAATCTGACAAAGATGAAG
ATGAAGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGAATGAGGAATATGGGAGTTTTTCTGATCCCCTTTATCTGCTATTTTTAA
Protein sequenceShow/hide protein sequence
MSMAVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGVQWKESQSKAKTLVPSDLKPKSAVCLHFIKNRLMLTTNDGTISVERVMLLYSIMK
GMKIVPGKDEERHFFKPTIDLPLIGKLQHNNAQRKEKASTSQATSPSGLTLERIEDKLKAYWVYAKERDEAIREFYLSIAPSIAPSIPPCSLTSINRCCLKKRKNLTKMK
MKKMKKMKERVPRMRNMGVFLIPFICYF