; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024661 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024661
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionABC transporter C family member 2-like
Genome locationscaffold12:17803822..17805888
RNA-Seq ExpressionSpg024661
SyntenySpg024661
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR011527 - ABC transporter type 1, transmembrane domain
IPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594431.1 ABC transporter C family member 2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2785.53Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKR+GLMNEILAAMDTVKCYAWE+SFQSKVQSIR+DELSWFRKASLLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

TYK05162.1 ABC transporter C family member 2-like [Cucumis melo var. makuwa]4.9e-2882.5Show/hide
Query:  NLRLTLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        N+ +TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKV+SIRNDELSWFRKA+LLGA+     N++
Subjt:  NLRLTLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

XP_008445683.2 PREDICTED: ABC transporter C family member 2-like [Cucumis melo]3.2e-2785.53Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKV+SIRNDELSWFRKA+LLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

XP_011656526.1 ABC transporter C family member 2 [Cucumis sativus]1.4e-2786.84Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKVQSIRNDELSWFRKA+LLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

XP_038877680.1 ABC transporter C family member 2-like [Benincasa hispida]1.7e-2889.47Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

TrEMBL top hitse value%identityAlignment
A0A0A0K897 ABC transmembrane type-1 domain-containing protein7.0e-2886.84Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKVQSIRNDELSWFRKA+LLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

A0A1S3BCT7 ABC transporter C family member 2-like1.6e-2785.53Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKV+SIRNDELSWFRKA+LLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

A0A5D3C1V5 ABC transporter C family member 2-like2.4e-2882.5Show/hide
Query:  NLRLTLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        N+ +TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSF SKV+SIRNDELSWFRKA+LLGA+     N++
Subjt:  NLRLTLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

A0A6J1EES4 ABC transporter C family member 22.0e-2785.53Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKR+GLMNEILAAMDTVKCYAWE+SFQSKVQSIR+DELSWFRKASLLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

A0A6J1KUZ1 ABC transporter C family member 2-like2.0e-2785.53Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL
        TLVISRLQKQSKEGLQRTDKR+GLMNEILAAMDTVKCYAWE+SFQSKVQSIR+DELSWFRKASLLGA+     N++
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTL

SwissProt top hitse value%identityAlignment
O35379 Multidrug resistance-associated protein 11.1e-0648.15Show/hide
Query:  LQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAV
        ++  D R+ LMNEIL  +  +K YAWE +FQ KV SIR +EL   +K++ L AV
Subjt:  LQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAV

Q42093 ABC transporter C family member 22.5e-2762.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS++QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRK+ LLGA+     N++      V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

Q9C8G9 ABC transporter C family member 11.3e-2662.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS+ QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRKA LL A      N++      V   + ++ GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

Q9C8H0 ABC transporter C family member 125.0e-2355.91Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        TL+IS+++K +KEGLQ TDKRVG+ NEIL++MDTVKCYAWE SF+S++Q IRN+ELSWFRKA LL A      N++      V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

Q9C8H1 ABC transporter C family member 114.7e-2152.69Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        TL++ +++K +KEGLQ TDKRVG++ EILA+MD VKCYAWE SF+S++Q IRN+ELSWFRKA LL A      N+       V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 19.0e-2862.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS+ QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRKA LL A      N++      V   + ++ GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

AT1G30400.2 multidrug resistance-associated protein 19.0e-2862.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS+ QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRKA LL A      N++      V   + ++ GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

AT1G30410.1 multidrug resistance-associated protein 133.5e-2455.91Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        TL+IS+++K +KEGLQ TDKRVG+ NEIL++MDTVKCYAWE SF+S++Q IRN+ELSWFRKA LL A      N++      V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

AT2G34660.1 multidrug resistance-associated protein 21.8e-2862.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS++QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRK+ LLGA+     N++      V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG

AT2G34660.2 multidrug resistance-associated protein 21.8e-2862.37Show/hide
Query:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG
        T++IS++QK +KEGLQRTDKR+GLMNE+LAAMDTVKCYAWENSFQSKVQ++R+DELSWFRK+ LLGA+     N++      V   +  + GG
Subjt:  TLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDELSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGCTCTGATCAATACTTGAGACAACATCTGCGTGAGAGCTGGTGTGCAAGGAGGAAGGTGGTGTTGAAGATAAGGAGTCTATTGGCGTTTCCACTACCTGGTGA
TAATGGCAGTTTCTTAGCTTGGTTATGGGAGGGTAACCTAAGTAATCTAAGATTGACACTTGTAATTAGCAGATTGCAGAAACAGTCCAAAGAGGGATTGCAACGTACAG
ACAAGAGAGTTGGTCTCATGAATGAGATTTTAGCTGCAATGGACACAGTGAAATGTTATGCATGGGAAAATAGCTTTCAGTCAAAAGTACAAAGTATTCGGAATGATGAG
TTGTCCTGGTTCCGTAAGGCATCACTTCTTGGGGCGGTACGTTATAGTTGTTTTAATACGTTGTCAAAGCCATCGAAGAAAGTTGTACATGCTATCGAAGCTATCAAAGG
AGGCCACAGGAAAAGACAAATGAAGACAAAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGCTCTGATCAATACTTGAGACAACATCTGCGTGAGAGCTGGTGTGCAAGGAGGAAGGTGGTGTTGAAGATAAGGAGTCTATTGGCGTTTCCACTACCTGGTGA
TAATGGCAGTTTCTTAGCTTGGTTATGGGAGGGTAACCTAAGTAATCTAAGATTGACACTTGTAATTAGCAGATTGCAGAAACAGTCCAAAGAGGGATTGCAACGTACAG
ACAAGAGAGTTGGTCTCATGAATGAGATTTTAGCTGCAATGGACACAGTGAAATGTTATGCATGGGAAAATAGCTTTCAGTCAAAAGTACAAAGTATTCGGAATGATGAG
TTGTCCTGGTTCCGTAAGGCATCACTTCTTGGGGCGGTACGTTATAGTTGTTTTAATACGTTGTCAAAGCCATCGAAGAAAGTTGTACATGCTATCGAAGCTATCAAAGG
AGGCCACAGGAAAAGACAAATGAAGACAAAGTGGTAG
Protein sequenceShow/hide protein sequence
MRSSDQYLRQHLRESWCARRKVVLKIRSLLAFPLPGDNGSFLAWLWEGNLSNLRLTLVISRLQKQSKEGLQRTDKRVGLMNEILAAMDTVKCYAWENSFQSKVQSIRNDE
LSWFRKASLLGAVRYSCFNTLSKPSKKVVHAIEAIKGGHRKRQMKTKW