; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024688 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024688
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 16-like
Genome locationscaffold12:10090607..10092045
RNA-Seq ExpressionSpg024688
SyntenySpg024688
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150081.1 GATA transcription factor 16 [Cucumis sativus]1.4e-5587.14Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN
        MMDPIE+GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS NR++NG     K+G  
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN

Query:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        SLKWR MAFGR+ELMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

XP_008458384.1 PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo]3.1e-5587.14Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN
        MMDPIE+GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS NR++NG     K+G  
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN

Query:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        SLKWR MAFGR+ELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

XP_022138518.1 GATA transcription factor 16-like [Momordica charantia]5.2e-5887.32Show/hide
Query:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG
        MMDPIE+GSEFKDAG+S   +SPAESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG EVERKNKGSSNR+SNG    AK+G
Subjt:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG

Query:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
         ++LKWRLMAFGREELMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

XP_023548663.1 GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]7.0e-5584.51Show/hide
Query:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG
        MMDPIE+GSEFKDA  S   SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG EVERK+KGSSNR+SNG    AK+G
Subjt:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG

Query:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
         ++LKWR  AFGR++LMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

XP_038875288.1 GATA transcription factor 16-like [Benincasa hispida]8.8e-5889.21Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMGENS
        MMDPIE+GSEFKDAGK SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERK+KGSSNRS+NG     K+G  S
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMGENS

Query:  LKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        LKWR MAFGR ELMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

TrEMBL top hitse value%identityAlignment
A0A0A0KG76 GATA-type domain-containing protein6.8e-5687.14Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN
        MMDPIE+GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS NR++NG     K+G  
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN

Query:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        SLKWR MAFGR+ELMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

A0A1S3C8C2 GATA transcription factor 16-like isoform X11.5e-5587.14Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN
        MMDPIE+GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS NR++NG     K+G  
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN

Query:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        SLKWR MAFGR+ELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

A0A5D3BXI1 GATA transcription factor 16-like isoform X11.5e-5587.14Show/hide
Query:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN
        MMDPIE+GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS NR++NG     K+G  
Subjt:  MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSS-NRSSNG---SAKMGEN

Query:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
        SLKWR MAFGR+ELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  SLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

A0A6J1CD73 GATA transcription factor 16-like2.5e-5887.32Show/hide
Query:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG
        MMDPIE+GSEFKDAG+S   +SPAESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG EVERKNKGSSNR+SNG    AK+G
Subjt:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG

Query:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
         ++LKWRLMAFGREELMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

A0A6J1KXU7 GATA transcription factor 16-like9.8e-5583.8Show/hide
Query:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG
        MMDP+E+GSEFKDA  S   SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG E ERK+KGSSNR+SNG    AK+G
Subjt:  MMDPIEDGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNG---SAKMG

Query:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA
         +SLKWR  AFGR++LMQR+QLGEEEQAAVLLMALSYGSVYA
Subjt:  ENSLKWRLMAFGREELMQRKQLGEEEQAAVLLMALSYGSVYA

SwissProt top hitse value%identityAlignment
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 12.6e-1267.39Show/hide
Query:  KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGG
        + C+DC TTKTPLWR GP GPKSLCNACGIR RK RR++     GG
Subjt:  KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGG

Q8LC59 GATA transcription factor 232.1e-1443.97Show/hide
Query:  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREELMQRKQLGEEE
        E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++    + R +K  +++  N  +            + G   + +R+ L EEE
Subjt:  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREELMQRKQLGEEE

Query:  QAAVLLMALSYGSVYA
        QAA+ L+ LS  SV A
Subjt:  QAAVLLMALSYGSVYA

Q8LG10 GATA transcription factor 155.4e-2658.33Show/hide
Query:  MDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWR
        +D IE+ S       SSS       KK+CA CGT+KTPLWRGGPAGPKSLCNACGIR+RKKRR+L+  NR    E K K S NR    + K G+ SLK R
Subjt:  MDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWR

Query:  LMAFGREELMQ--------RKQLGEEEQAAVLLMALSY-GSVYA
        LM  GRE +MQ        R +LGEEEQAAVLLMALSY  SVYA
Subjt:  LMAFGREELMQ--------RKQLGEEEQAAVLLMALSY-GSVYA

Q9FJ10 GATA transcription factor 161.1e-2665.79Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREEL----MQRKQLGEEEQA
        KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKRR       G E  +K K SS  S  G+ K GE SLK  LM  G  +      QR++LGEEEQA
Subjt:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREEL----MQRKQLGEEEQA

Query:  AVLLMALSYGSVYA
        AVLLMALSYGSVYA
Subjt:  AVLLMALSYGSVYA

Q9LIB5 GATA transcription factor 171.9e-1840.12Show/hide
Query:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS----------------------------------
        S   + S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+    E ++KN+ S                                  
Subjt:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS----------------------------------

Query:  --SNRSSNGSAKMGEN---SLKWRLMAFGREELMQR---KQLGEEEQAAVLLMALSYGSVYA
          + RSS+ S+  G +    L +++    R  + ++   ++LGEEE+AAVLLMALS  SVYA
Subjt:  --SNRSSNGSAKMGEN---SLKWRLMAFGREELMQR---KQLGEEEQAAVLLMALSYGSVYA

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 153.8e-2758.33Show/hide
Query:  MDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWR
        +D IE+ S       SSS       KK+CA CGT+KTPLWRGGPAGPKSLCNACGIR+RKKRR+L+  NR    E K K S NR    + K G+ SLK R
Subjt:  MDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWR

Query:  LMAFGREELMQ--------RKQLGEEEQAAVLLMALSY-GSVYA
        LM  GRE +MQ        R +LGEEEQAAVLLMALSY  SVYA
Subjt:  LMAFGREELMQ--------RKQLGEEEQAAVLLMALSY-GSVYA

AT3G16870.1 GATA transcription factor 171.3e-1940.12Show/hide
Query:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS----------------------------------
        S   + S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+    E ++KN+ S                                  
Subjt:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS----------------------------------

Query:  --SNRSSNGSAKMGEN---SLKWRLMAFGREELMQR---KQLGEEEQAAVLLMALSYGSVYA
          + RSS+ S+  G +    L +++    R  + ++   ++LGEEE+AAVLLMALS  SVYA
Subjt:  --SNRSSNGSAKMGEN---SLKWRLMAFGREELMQR---KQLGEEEQAAVLLMALSYGSVYA

AT4G16141.1 GATA type zinc finger transcription factor family protein7.3e-1838.98Show/hide
Query:  DAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSN---RSSNGSAKMGE--------------
        D G  SS       KKTC DCGT++TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+ R  +++ K+K ++N    S N     GE              
Subjt:  DAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSN---RSSNGSAKMGE--------------

Query:  -----------NSLK-------------------WRLMAFG-REELMQR---------KQLGEEEQAAVLLMALSYG
                   N +K                    R + FG +   M+R         ++LGEEE+AAVLLMALS G
Subjt:  -----------NSLK-------------------WRLMAFG-REELMQR---------KQLGEEEQAAVLLMALSYG

AT5G26930.1 GATA transcription factor 231.5e-1543.97Show/hide
Query:  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREELMQRKQLGEEE
        E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++    + R +K  +++  N  +            + G   + +R+ L EEE
Subjt:  ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREELMQRKQLGEEE

Query:  QAAVLLMALSYGSVYA
        QAA+ L+ LS  SV A
Subjt:  QAAVLLMALSYGSVYA

AT5G49300.1 GATA transcription factor 167.7e-2865.79Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREEL----MQRKQLGEEEQA
        KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKRR       G E  +K K SS  S  G+ K GE SLK  LM  G  +      QR++LGEEEQA
Subjt:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREEL----MQRKQLGEEEQA

Query:  AVLLMALSYGSVYA
        AVLLMALSYGSVYA
Subjt:  AVLLMALSYGSVYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCCGATTGAGGATGGATCGGAGTTCAAGGACGCCGGAAAGTCGTCGTCGCCGGCGGAAAGTGAGCAGAATAAAAAGACCTGCGCCGATTGCGGCACGACGAA
GACTCCTCTCTGGCGCGGAGGTCCGGCAGGCCCTAAGTCTCTTTGCAATGCGTGTGGAATCAGAAGCAGGAAAAAGAGAAGATCACTTCTAGGGTTAAACAGAGGCGGCG
AAGTGGAGAGAAAAAACAAGGGAAGTAGTAACAGAAGCAGCAATGGCAGTGCAAAAATGGGAGAAAATAGCTTGAAATGGAGATTAATGGCGTTTGGTAGAGAAGAGTTG
ATGCAAAGGAAACAGTTAGGAGAGGAAGAACAAGCTGCTGTTTTACTAATGGCTCTTTCTTATGGATCCGTATATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCCGATTGAGGATGGATCGGAGTTCAAGGACGCCGGAAAGTCGTCGTCGCCGGCGGAAAGTGAGCAGAATAAAAAGACCTGCGCCGATTGCGGCACGACGAA
GACTCCTCTCTGGCGCGGAGGTCCGGCAGGCCCTAAGTCTCTTTGCAATGCGTGTGGAATCAGAAGCAGGAAAAAGAGAAGATCACTTCTAGGGTTAAACAGAGGCGGCG
AAGTGGAGAGAAAAAACAAGGGAAGTAGTAACAGAAGCAGCAATGGCAGTGCAAAAATGGGAGAAAATAGCTTGAAATGGAGATTAATGGCGTTTGGTAGAGAAGAGTTG
ATGCAAAGGAAACAGTTAGGAGAGGAAGAACAAGCTGCTGTTTTACTAATGGCTCTTTCTTATGGATCCGTATATGCTTGA
Protein sequenceShow/hide protein sequence
MMDPIEDGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNRSSNGSAKMGENSLKWRLMAFGREEL
MQRKQLGEEEQAAVLLMALSYGSVYA