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Spg024698 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024698
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationscaffold12:12090011..12092849
RNA-Seq ExpressionSpg024698
SyntenySpg024698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.7e-0636Show/hide
Query:  PHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        P F+   I  HGW QFC         +VREFYAN+ +     V V+ V V ++  AINS+F L++     Y + A   ++E+L   + EV I+ A W++S
Subjt:  PHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.1e-0831.91Show/hide
Query:  EAEELEERLPYERFVNNLARAKYREMLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINS
        +A + E      R+ NN+         ++ F+L+   +     F+   I  H W+QFCA  E     +VREFYAN+ + E   V VRGV V WS  AIN+
Subjt:  EAEELEERLPYERFVNNLARAKYREMLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINS

Query:  LFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        +F L D P   ++E     + + L   +  V    A+W +S
Subjt:  LFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]2.1e-0735.29Show/hide
Query:  RFVNNLARAKYREMLK-RNFLLERGF----SK--ELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ
        +F +  A  +Y E ++ R    E+GF    SK  E P F+   I  H W+ FCA  E     +VREFYAN+   +   V VRGV V  S  AIN+++ L 
Subjt:  RFVNNLARAKYREMLK-RNFLLERGF----SK--ELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ

Query:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        D P   ++E   A +  +L   +  V I  A+W +S
Subjt:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]3.5e-0740.59Show/hide
Query:  RFVNNLARAKYREMLKRNFL-LERGFSKE------LPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ
        +F +  A A+Y E +K   L  E+GF+         P F+   I  H W+ FCA  E     +VREFYAN+ + E   V V+GV V WS  AIN+LF L 
Subjt:  RFVNNLARAKYREMLKRNFL-LERGFSKE------LPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ

Query:  D
        D
Subjt:  D

XP_022845662.1 uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris]4.6e-0730.3Show/hide
Query:  RFVNNLARAKYRE-MLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAG
        RF++  A+ +Y++ ++ RN + ERG    L +FL   I + GWE+F  +  A +  +V+EFY N +E E F+V V    + +   +IN  ++ QD P+  
Subjt:  RFVNNLARAKYRE-MLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAG

Query:  YNEMAVAPSNEKLNAAVREVGIKEAQWRLSLS
        Y+ +        L+  +R +    A+W+ S S
Subjt:  YNEMAVAPSNEKLNAAVREVGIKEAQWRLSLS

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.4e-0831.91Show/hide
Query:  EAEELEERLPYERFVNNLARAKYREMLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINS
        +A + E      R+ NN+         ++ F+L+   +     F+   I  H W+QFCA  E     +VREFYAN+ + E   V VRGV V WS  AIN+
Subjt:  EAEELEERLPYERFVNNLARAKYREMLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINS

Query:  LFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        +F L D P   ++E     + + L   +  V    A+W +S
Subjt:  LFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

A0A2P5CXV1 Uncharacterized protein1.0e-0735.29Show/hide
Query:  RFVNNLARAKYREMLK-RNFLLERGF----SK--ELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ
        +F +  A  +Y E ++ R    E+GF    SK  E P F+   I  H W+ FCA  E     +VREFYAN+   +   V VRGV V  S  AIN+++ L 
Subjt:  RFVNNLARAKYREMLK-RNFLLERGF----SK--ELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ

Query:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        D P   ++E   A +  +L   +  V I  A+W +S
Subjt:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

A0A2P5EK98 Uncharacterized protein (Fragment)8.4e-0731.82Show/hide
Query:  RFVNNLARAKYREML-------KRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ
        +F    A  +Y E +       ++ FLL    +     F+   I  H W QFCA  E     +VREFYAN+ + E   V VRGV V W+  AIN++F L 
Subjt:  RFVNNLARAKYREML-------KRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ

Query:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQ
        D P   ++E     + ++L   +  V    A+
Subjt:  DFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQ

A0A2P5EYL5 Uncharacterized protein1.7e-0740.59Show/hide
Query:  RFVNNLARAKYREMLKRNFL-LERGFSKE------LPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ
        +F +  A A+Y E +K   L  E+GF+         P F+   I  H W+ FCA  E     +VREFYAN+ + E   V V+GV V WS  AIN+LF L 
Subjt:  RFVNNLARAKYREMLKRNFL-LERGFSKE------LPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQ

Query:  D
        D
Subjt:  D

W9QTD9 Uncharacterized protein8.4e-0736Show/hide
Query:  PHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS
        P F+   I  HGW QFC         +VREFYAN+ +     V V+ V V ++  AINS+F L++     Y + A   ++E+L   + EV I+ A W++S
Subjt:  PHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAGYNEMAVAPSNEKLNAAVREVGIKEAQWRLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAATTACAAGCTCAACTAAACATAACAAAGCCATAAATCTAGCTAGAGAAAAGGAAAGGGAAAAGAAAACTCAATGTAGGCCGAGACCGAACGTCCCCGTCAC
GATCCCCACGAACAATGGGTTGATTTCCGCTTTTATCCCTCTTGTTCAGCCTCAATCCTCTGTTTTCTCCTCTGTTTTACGGCTCCAAAAGTATCCAAAAGAGTTCCCCC
AAAAACCTAGCCGAAAAGAAGCTTATCTTATGTTTTTTCGTCATAGCGTCGAGACGCTGTCAAGACGGCGTCTCGACGCTGCCTTCAAAACGCGCGTTTCTGGAAAGGAA
AACTCGCAGCGTCTCGACGCTGTAAAACGCGTGGAGAATCTTGAAATGCCACGTGTTGCACAGGGGCAATCTGACGGGCTAGCCGTTAGCCAACACATCAGTGCATTTAC
TACGAAAAAGAAGAGAACTCCACAAGAAAAAGAGGCTCGAAAGTTACGAAAGCAACAACAATCTCCCATTGCTAAAGCTATTCAGAAGGTAATCGAAGACGTTGCAGATG
AAGAGGCTGAAGAAGAACCCACGAAAACCCTAGAGAAAGAAAAGACCCTGGAACCGATTAATGTTGTCGAGGAAGCGGAAGAACTAGAAGAGAGACTGCCATATGAGCGT
TTCGTCAACAATCTTGCGAGAGCAAAATATCGTGAAATGCTAAAACGTAATTTCTTGCTGGAGCGAGGTTTCAGCAAAGAGTTACCCCATTTCTTAAGGGTCGGTATTAA
GAATCATGGTTGGGAGCAATTCTGCGCTAAGCTTGAGGCCGCTAACTCACATATGGTGCGCGAGTTCTATGCGAACATCGATGAAGGCGAAGGATTCCAAGTGATGGTTC
GCGGCGTGGCGGTGGATTGGAGCCGTGGAGCGATCAATTCCCTATTCAACCTACAAGACTTTCCTCACGCGGGCTATAATGAGATGGCAGTGGCGCCATCAAATGAGAAG
CTCAATGCGGCGGTGAGGGAGGTTGGTATCAAGGAGGCTCAATGGCGGCTGTCTTTAAGCATTGATGTCGAAAAGATTGTCTCCAGCGAGATACACAATTGCTGGAGGAA
AAAGGCTACAGAGGACTTAAGAAGCCCGCTAGGGTGGTATAGTTTGTGGCATCCATCGAGTACAAGAGCAGTTACAGTTGGTGTTCAGTCGGTTGGAGTTTACCGAACGT
CAACTCCAAACGCCTTCCCAGTATTCTCCGATGACTTAATGAACTCGTGGATCTTGCTGGCGCCAGTGGAAAGAGATGAAGAAGAAGAAGATGCTGGCCAGGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAATTACAAGCTCAACTAAACATAACAAAGCCATAAATCTAGCTAGAGAAAAGGAAAGGGAAAAGAAAACTCAATGTAGGCCGAGACCGAACGTCCCCGTCAC
GATCCCCACGAACAATGGGTTGATTTCCGCTTTTATCCCTCTTGTTCAGCCTCAATCCTCTGTTTTCTCCTCTGTTTTACGGCTCCAAAAGTATCCAAAAGAGTTCCCCC
AAAAACCTAGCCGAAAAGAAGCTTATCTTATGTTTTTTCGTCATAGCGTCGAGACGCTGTCAAGACGGCGTCTCGACGCTGCCTTCAAAACGCGCGTTTCTGGAAAGGAA
AACTCGCAGCGTCTCGACGCTGTAAAACGCGTGGAGAATCTTGAAATGCCACGTGTTGCACAGGGGCAATCTGACGGGCTAGCCGTTAGCCAACACATCAGTGCATTTAC
TACGAAAAAGAAGAGAACTCCACAAGAAAAAGAGGCTCGAAAGTTACGAAAGCAACAACAATCTCCCATTGCTAAAGCTATTCAGAAGGTAATCGAAGACGTTGCAGATG
AAGAGGCTGAAGAAGAACCCACGAAAACCCTAGAGAAAGAAAAGACCCTGGAACCGATTAATGTTGTCGAGGAAGCGGAAGAACTAGAAGAGAGACTGCCATATGAGCGT
TTCGTCAACAATCTTGCGAGAGCAAAATATCGTGAAATGCTAAAACGTAATTTCTTGCTGGAGCGAGGTTTCAGCAAAGAGTTACCCCATTTCTTAAGGGTCGGTATTAA
GAATCATGGTTGGGAGCAATTCTGCGCTAAGCTTGAGGCCGCTAACTCACATATGGTGCGCGAGTTCTATGCGAACATCGATGAAGGCGAAGGATTCCAAGTGATGGTTC
GCGGCGTGGCGGTGGATTGGAGCCGTGGAGCGATCAATTCCCTATTCAACCTACAAGACTTTCCTCACGCGGGCTATAATGAGATGGCAGTGGCGCCATCAAATGAGAAG
CTCAATGCGGCGGTGAGGGAGGTTGGTATCAAGGAGGCTCAATGGCGGCTGTCTTTAAGCATTGATGTCGAAAAGATTGTCTCCAGCGAGATACACAATTGCTGGAGGAA
AAAGGCTACAGAGGACTTAAGAAGCCCGCTAGGGTGGTATAGTTTGTGGCATCCATCGAGTACAAGAGCAGTTACAGTTGGTGTTCAGTCGGTTGGAGTTTACCGAACGT
CAACTCCAAACGCCTTCCCAGTATTCTCCGATGACTTAATGAACTCGTGGATCTTGCTGGCGCCAGTGGAAAGAGATGAAGAAGAAGAAGATGCTGGCCAGGAAGATTGA
Protein sequenceShow/hide protein sequence
MNEITSSTKHNKAINLAREKEREKKTQCRPRPNVPVTIPTNNGLISAFIPLVQPQSSVFSSVLRLQKYPKEFPQKPSRKEAYLMFFRHSVETLSRRRLDAAFKTRVSGKE
NSQRLDAVKRVENLEMPRVAQGQSDGLAVSQHISAFTTKKKRTPQEKEARKLRKQQQSPIAKAIQKVIEDVADEEAEEEPTKTLEKEKTLEPINVVEEAEELEERLPYER
FVNNLARAKYREMLKRNFLLERGFSKELPHFLRVGIKNHGWEQFCAKLEAANSHMVREFYANIDEGEGFQVMVRGVAVDWSRGAINSLFNLQDFPHAGYNEMAVAPSNEK
LNAAVREVGIKEAQWRLSLSIDVEKIVSSEIHNCWRKKATEDLRSPLGWYSLWHPSSTRAVTVGVQSVGVYRTSTPNAFPVFSDDLMNSWILLAPVERDEEEEDAGQED