CuGenDBv2

Gene ID	Spg024703
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ORF43m
Genome location	scaffold12:11274959..11275207
RNA-Seq Expression	Spg024703
Synteny	Spg024703
Gene Ontology terms	GO:0006101 - citrate metabolic process (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0009507 - chloroplast (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0004108 - citrate (Si)-synthase activity (molecular function) GO:0032549 - ribonucleoside binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]

8.0e-38

96.34

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

KAB8477470.1 hypothetical protein FH972_025336 [Carpinus fangiana]

3.3e-36

93.9

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG S R PSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

PQP98136.1 hypothetical protein Pyn_20559 [Prunus yedoensis var. nudiflora]

4.4e-36

93.9

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG S RVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKE KSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

QHE65624.1 ORF43m [Nitraria roborowskii]

2.1e-38

97.56

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

YP_009758287.1 hypothetical protein [Rubus amabilis]

4.4e-36

93.9

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG S RVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKE KSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

TrEMBL top hits

e value

%identity

Alignment

A0A5N6L147 Uncharacterized protein

1.6e-36

93.9

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG S R PSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A6B9QF48 ORF43m

1.0e-38

97.56

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A6B9QFK3 ORF43m

1.0e-38

97.56

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A6B9QGL2 ORF43m

1.0e-38

97.56

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

U5CKY2 Uncharacterized protein

3.9e-38

96.34

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Query:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVG SLRVPSSGIPGEEDQVGPCEQLDALS FNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATCGTACATGGACGGTAGTTGGAGTTGGCAGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTCGATGCACT
ATCTCTCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCACATCGTCTCCACCCTGTAGGAACTACGAGATCACCCCAAGGACGCCTTC
GGTATCCAGGGGTCGCGGACCGACCATAG

mRNA sequence

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Protein sequence

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MDRTWTVVGVGSSLRVPSSGIPGEEDQVGPCEQLDALSLFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

Spg024703 (gene) of Sponge gourd (cylindrica) v1 genome