; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024710 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024710
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:11275371..11277003
RNA-Seq ExpressionSpg024710
SyntenySpg024710
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFQ07568.1 uncharacterized protein ycf68 [Phtheirospermum japonicum]1.2e-5346.88Show/hide
Query:  GLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEV----------VTRALSHMDSSMCSSAPDPEMWII--------QGTLAWR--TSPVRTGFETKL
        GLVHTARHTMG GHA+S YLNRKEGDAEGRASDWSEV          +T   +       +S  + EM +          G LA R  +S V    +  +
Subjt:  GLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEV----------VTRALSHMDSSMCSSAPDPEMWII--------QGTLAWR--TSPVRTGFETKL

Query:  LL--RRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKN
        ++   RIDGAI+VRSNVDPTF SLVGSGRS GDH GSSLLEN YIPYQ MDSYLSSTGL  A++ +      +   + +   + PF   DQEIGSSRKKN
Subjt:  LL--RRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKN

Query:  VWLIDNSLLGRRPPQSLRTPPISAMGCAMIYFTG-EVSGSSPGW---------PSYAKEKN-------------------KRIEEASDSFMQAPLASGGY
            +        P+S++      +     +  G E  G+   W          ++ K+++                   KRIEEASD FM APL SGGY
Subjt:  VWLIDNSLLGRRPPQSLRTPPISAMGCAMIYFTG-EVSGSSPGW---------PSYAKEKN-------------------KRIEEASDSFMQAPLASGGY

Query:  SSVGRAPLLQLGRCDYGLDV
        SSVGRAPLLQLGRCDYGLDV
Subjt:  SSVGRAPLLQLGRCDYGLDV

KAG8363220.1 hypothetical protein BUALT_BualtPtG0005200 [Buddleja alternifolia]8.5e-5253.99Show/hide
Query:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSR
        MG GHA+S YLNRKEGDAEGRASDWSEVVT   SHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG                                  
Subjt:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSR

Query:  GDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAM
                          MDSYLSST  GLEKAAINRI LILPS  RKEEREILFP F RDQEIGSSR K    +             R  P  ++    
Subjt:  GDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAM

Query:  IYFTGEVS----GSSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDYG
            G +S       P  P       KRIEEASD FM APL SGGYSSVGRAP LQLGRCDYG
Subjt:  IYFTGEVS----GSSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDYG

PWA37412.1 ATP synthase subunit beta, chloroplastic [Artemisia annua]1.5e-4848.96Show/hide
Query:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETK
        MG GHA+S YLNRKEGDAEGRASDWSEVVTR                              ALSHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG    
Subjt:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETK

Query:  LLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNV
                   VRSNVD TF SLVGSGRS GDH GSSLLEN YIPYQ MDSYLSSTGLEKA I     I  S   K E+       C  +E G +R  + 
Subjt:  LLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNV

Query:  WLID-NSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSG-SSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDY
        W    N  L     +    P  +      +    ++ G ++PG         KRIEEASDSFM APL SG  +      L++L  C++
Subjt:  WLID-NSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSG-SSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDY

QUO98456.1 hypothetical chloroplast RF68 [Canarium album]2.0e-4863.78Show/hide
Query:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------
        GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRS G H GSSLL+N YIPYQ MDSYLSST                                       
Subjt:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------

Query:  -----------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI
                   GLEKAAINRIFLILPS  RKEEREILFPF F RDQEIGSSRKKN WLI+NSLLG RPPQSLRTPPI AMGC  +
Subjt:  -----------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI

YP_009939916.1 hypothetical protein RF68 [Citrus medica]7.5e-4862.9Show/hide
Query:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------
        GFE KLLLRRIDGAIQVRSNVDPTFYSLVGSGRS GDH GSSLL+N YIPYQ MDSYLSST                                       
Subjt:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------

Query:  ------------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI
                    GLEKAAINRIFLILPS  RKEEREILFPF F RDQEIGSSRKKN WLI+NSLLG RPPQSLRTPP  AMGC  +
Subjt:  ------------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI

TrEMBL top hitse value%identityAlignment
A0A2N9GIA5 Uncharacterized protein ycf685.5e-6568.87Show/hide
Query:  MNSFSGLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNV
        +NSF GLVHTARHTMG GHA+S YLN KEGDAEGRASDWSEVVT                                           RRIDGAIQVRSNV
Subjt:  MNSFSGLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNV

Query:  DPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQ
        DPTFYS+VGSGRS GDH GSSLLEN YIPYQYMDSYLSST  GLEKAAINRIFLILP   RKEE EILFP F RDQEIGSS KKN WLI+NSLLG RPPQ
Subjt:  DPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQ

Query:  SLRTPPISAMGC
        SLR PPISAMGC
Subjt:  SLRTPPISAMGC

A0A2N9HP93 Uncharacterized protein ycf689.5e-6563.75Show/hide
Query:  MNSFSGLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLR------------
        +NSF GLVHTARHTMG GHA+S YLN KEGDAEGRASDWSEVVTR+   +D     S P        GT   +    R G      +             
Subjt:  MNSFSGLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLR------------

Query:  ----------------RIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFF
                        RIDGAIQVRSNVDPTFYS+VGSGRS GDH GSSLLEN YIPYQYMDSYLSST  GLEKAAINRIFLILP   RKEE EILFP F
Subjt:  ----------------RIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFPFF

Query:  CRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGC
         RDQEIGSS KKN WLI+NSLLG RPPQSLR PPISAMGC
Subjt:  CRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGC

A0A2U1KL25 Uncharacterized protein ycf687.3e-4948.96Show/hide
Query:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETK
        MG GHA+S YLNRKEGDAEGRASDWSEVVTR                              ALSHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG    
Subjt:  MGDGHAQSHYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETK

Query:  LLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNV
                   VRSNVD TF SLVGSGRS GDH GSSLLEN YIPYQ MDSYLSSTGLEKA I     I  S   K E+       C  +E G +R  + 
Subjt:  LLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNV

Query:  WLID-NSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSG-SSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDY
        W    N  L     +    P  +      +    ++ G ++PG         KRIEEASDSFM APL SG  +      L++L  C++
Subjt:  WLID-NSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSG-SSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDY

A0A6N2NK86 Uncharacterized protein ycf68 (Fragment)1.2e-5450.85Show/hide
Query:  GDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG--------------
        G  +G  + W      ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSP     ++        G IQ RSN    F    G    RG              
Subjt:  GDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG--------------

Query:  -DHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCA---
            G   LE+     +    +    GLEKAAINRIFL LPS  RKEEREILFP F RDQEIGSS KKN WLI+NSLLG RPPQSLRTPPISAMGC    
Subjt:  -DHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCA---

Query:  ----------MIYFTGEVSGSSPGWPSYAKEK----------------------NKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDYGLDV
                     +TGE+  +     S  K                         KRIEEASDSF+ APL SGGYSSVGRAPLLQLGRCDYGLDV
Subjt:  ----------MIYFTGEVSGSSPGWPSYAKEK----------------------NKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDYGLDV

A0A7L7SDI0 Uncharacterized protein ycf683.6e-4862.9Show/hide
Query:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------
        GFE KLLLRRIDGAIQVRSNVDPTFYSLVGSGRS GDH GSSLL+N YIPYQ MDSYLSST                                       
Subjt:  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSST---------------------------------------

Query:  ------------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI
                    GLEKAAINRIFLILPS  RKEEREILFPF F RDQEIGSSRKKN WLI+NSLLG RPPQSLRTPP  AMGC  +
Subjt:  ------------GLEKAAINRIFLILPSRKRKEEREILFPF-FCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMI

SwissProt top hitse value%identityAlignment
P03938 Uncharacterized protein ycf681.3e-0790.62Show/hide
Query:  KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG
        KLLLRRIDGAIQVRS+VD TFYSLVGSGRS G
Subjt:  KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG

P52807 Uncharacterized protein ycf685.4e-1764Show/hide
Query:  LAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLV---GSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTG
        +A+ +     GF T+L+LRRIDGAIQVRSN DPTFYS V   G G     HLGSSLLEN YIPYQ MD YLS TG
Subjt:  LAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLV---GSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTG

Q49KT9 Uncharacterized protein ycf681.9e-4688.57Show/hide
Query:  RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEK
        RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETK LLRRIDGAIQVRSNVDPTFYSLVGSGRS GD  GSSLLEN YIPYQ MDSYLSSTGL  
Subjt:  RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEK

Query:  AAINR
        A++ +
Subjt:  AAINR

Q6L3C9 Uncharacterized protein ycf681.3e-0790.62Show/hide
Query:  KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG
        KLLLRRIDGAIQVRS+VD TFYSLVGSGRS G
Subjt:  KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRG

Q85WV9 Uncharacterized protein ycf689.2e-1762.67Show/hide
Query:  LAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGD---HLGSSLLENLYIPYQYMDSYLSSTG
        +A+ +     GF T+L+LRRIDGAIQVRSN DPTFYS V  G   G    H GSSLLEN YIPYQ MD YLS TG
Subjt:  LAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSRGD---HLGSSLLENLYIPYQYMDSYLSSTG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGTTCTCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGATGGCCATGCCCAAAGTCATTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAG
TGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTA
CTTCTCCTGTTCGAACCGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAAGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCC
GGGCGGTCCAGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCTATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAAT
CAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCTGCAGGGACCAAGAGATTGGATCTAGCCGTAAGAAGAATG
TTTGGCTGATAGATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCT
GGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGCCTCGGGGGGATATAGCTCAGT
TGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGTTCTCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGATGGCCATGCCCAAAGTCATTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAG
TGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTA
CTTCTCCTGTTCGAACCGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAAGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCC
GGGCGGTCCAGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCTATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAAT
CAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCTGCAGGGACCAAGAGATTGGATCTAGCCGTAAGAAGAATG
TTTGGCTGATAGATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCT
GGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGCCTCGGGGGGATATAGCTCAGT
TGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA
Protein sequenceShow/hide protein sequence
MNSFSGLVHTARHTMGDGHAQSHYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKLLLRRIDGAIQVRSNVDPTFYSLVGS
GRSRGDHLGSSLLENLYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFCRDQEIGSSRKKNVWLIDNSLLGRRPPQSLRTPPISAMGCAMIYFTGEVS
GSSPGWPSYAKEKNKRIEEASDSFMQAPLASGGYSSVGRAPLLQLGRCDYGLDV