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Spg024788 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024788
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold12:11898705..11901403
RNA-Seq ExpressionSpg024788
SyntenySpg024788
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.5e-1544.12Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK
         +
Subjt:  RK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.5e-1630.24Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK----------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERD
         +                D  + ++   +  + +   PS   P T  S  +   G +  QL  + + L                     + +W Y+KERD
Subjt:  RK----------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERD

Query:  EAIRE
         A+++
Subjt:  EAIRE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.2e-1532.78Show/hide
Query:  LKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRRK----------------DKASTSQ
        L P + VW HF+K+ L+PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +                D  + ++
Subjt:  LKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRRK----------------DKASTSQ

Query:  ATPQSGSNVA-FPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERDEAIRE
         T +  + +   PS   P    S  S A G +  QL  + + L                     + +W Y+KERD A+++
Subjt:  ATPQSGSNVA-FPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERDEAIRE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.5e-1545.92Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLC
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S +RV+LLY ++ G  INVG II  EI A   +++G LFF SLIT++C
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLC

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.9e-1732.81Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK--------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL----------KTYWTYAKERDEAIRE
                        D  + ++ T +  + +   PS   P    S  S   G V  QL  + + L          + +W Y+KERD A+++
Subjt:  RK--------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL----------KTYWTYAKERDEAIRE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)7.0e-1644.12Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK
         +
Subjt:  RK

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-1630.24Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK----------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERD
         +                D  + ++   +  + +   PS   P T  S  +   G +  QL  + + L                     + +W Y+KERD
Subjt:  RK----------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERD

Query:  EAIRE
         A+++
Subjt:  EAIRE

A0A2P5CEY2 Uncharacterized protein1.6e-1532.78Show/hide
Query:  LKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRRK----------------DKASTSQ
        L P + VW HF+K+ L+PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +                D  + ++
Subjt:  LKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRRK----------------DKASTSQ

Query:  ATPQSGSNVA-FPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERDEAIRE
         T +  + +   PS   P    S  S A G +  QL  + + L                     + +W Y+KERD A+++
Subjt:  ATPQSGSNVA-FPSQHTPFTGPSPASEALGMVHYQLDRIRENL---------------------KTYWTYAKERDEAIRE

A0A2P5CPE8 Uncharacterized protein1.2e-1545.92Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLC
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S +RV+LLY ++ G  INVG II  EI A   +++G LFF SLIT++C
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLC

A0A2P5DXM3 Uncharacterized protein2.9e-1732.81Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  RK--------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL----------KTYWTYAKERDEAIRE
                        D  + ++ T +  + +   PS   P    S  S   G V  QL  + + L          + +W Y+KERD A+++
Subjt:  RK--------------DKASTSQATPQSGS-NVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENL----------KTYWTYAKERDEAIRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAGCATTGAAACTCGTGGCCAACAAAGGGGTCCAATGGAAAGAATCACAGACAAAAGTGAAGTCTCTAGTGCCAAGTGACCTAAAGCCAGAATCGGCAGTGTG
GCTTCACTTCATCAAGAACTGCTTGATGCCAACCACCCACGATAGCACGATTTCAGTAGATAGAGTGATGCTACTGTATTGCCTAATGAAGGGGTTGGAGATCAATGTAG
GGAGCATTATCAGGGATGAGATCTTAGCCTGTGGACGGAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAGCTCTGTCAGAGGAGGAAGGATAAAGCCTCC
ACATCACAGGCCACACCTCAATCAGGGTCGAATGTAGCCTTTCCATCCCAACACACTCCTTTTACAGGGCCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCACTACCA
GCTTGATCGAATCAGGGAGAACCTGAAGACTTATTGGACGTATGCCAAGGAAAGGGATGAAGCTATTAGAGAGTTCTATCTCTCCATTGCCCCAAGCATTGCTCCGGGAA
GTGAGTATCACTCCGAGCTTGTGAACTTTGCTCGTAGCCAGATGCCTTCACCACAAAGTGTCGATAAGCTAGAACGAAGAGTTGAAGCTGGAATTCCCCAGAAATGCGAC
CGCATTTCTGCGAAGGCAAAATGGAAATGCGACCGCATTTCTGGAAAAACAGAGTCCGTTCCGAGTCGCACGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGG
TTGTTTTGACCCCGAAATGACTGGGCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCAATTTCTACACTATATAAGCTCGGGATTCAAAGTCAAATTCAAGCAGAAC
TCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAGCATTGAAACTCGTGGCCAACAAAGGGGTCCAATGGAAAGAATCACAGACAAAAGTGAAGTCTCTAGTGCCAAGTGACCTAAAGCCAGAATCGGCAGTGTG
GCTTCACTTCATCAAGAACTGCTTGATGCCAACCACCCACGATAGCACGATTTCAGTAGATAGAGTGATGCTACTGTATTGCCTAATGAAGGGGTTGGAGATCAATGTAG
GGAGCATTATCAGGGATGAGATCTTAGCCTGTGGACGGAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAGCTCTGTCAGAGGAGGAAGGATAAAGCCTCC
ACATCACAGGCCACACCTCAATCAGGGTCGAATGTAGCCTTTCCATCCCAACACACTCCTTTTACAGGGCCTTCACCAGCATCAGAAGCCCTAGGCATGGTCCACTACCA
GCTTGATCGAATCAGGGAGAACCTGAAGACTTATTGGACGTATGCCAAGGAAAGGGATGAAGCTATTAGAGAGTTCTATCTCTCCATTGCCCCAAGCATTGCTCCGGGAA
GTGAGTATCACTCCGAGCTTGTGAACTTTGCTCGTAGCCAGATGCCTTCACCACAAAGTGTCGATAAGCTAGAACGAAGAGTTGAAGCTGGAATTCCCCAGAAATGCGAC
CGCATTTCTGCGAAGGCAAAATGGAAATGCGACCGCATTTCTGGAAAAACAGAGTCCGTTCCGAGTCGCACGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGG
TTGTTTTGACCCCGAAATGACTGGGCAACCTTCCAGCACCTATTTCACAGCTCCTCAACCAATTTCTACACTATATAAGCTCGGGATTCAAAGTCAAATTCAAGCAGAAC
TCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG
Protein sequenceShow/hide protein sequence
MKEALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNCLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRRKDKAS
TSQATPQSGSNVAFPSQHTPFTGPSPASEALGMVHYQLDRIRENLKTYWTYAKERDEAIREFYLSIAPSIAPGSEYHSELVNFARSQMPSPQSVDKLERRVEAGIPQKCD
RISAKAKWKCDRISGKTESVPSRTRVVVDESSSHLTGCFDPEMTGQPSSTYFTAPQPISTLYKLGIQSQIQAELTWKKRVVTEPWLDANE