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Spg024801 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024801
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold12:8011787..8012686
RNA-Seq ExpressionSpg024801
SyntenySpg024801
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581892.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3782.08Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI DTDMPLKLQIQAMKAASEALDLYDVFD KSIAAHIKK              KFDDGHG GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGAS
        IFKG S
Subjt:  IFKGAS

KAG6780462.1 hypothetical protein POTOM_013322 [Populus tomentosa]3.9e-3575.7Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI+DTDMPLK+QIQAM +AS+ALDLYDV DCKS+A+HIKK          F  Q+FD  +G GWQCVVGSNFG FFTHSKGTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASS
        IFKGASS
Subjt:  IFKGASS

XP_022955724.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.4e-3782.08Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI DTDMPLKLQIQAMKAASEALDLYDVFD KSIAAHIKK              KFDDGHG GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGAS
        IFKG S
Subjt:  IFKGAS

XP_023529016.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]3.2e-3781.13Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI DTDMPLKLQIQAMKAASEALDLYDV+D KSIAAHIKK              KFDDGHG GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGAS
        IFKG S
Subjt:  IFKGAS

XP_027926174.1 probable dynein light chain [Vigna unguiculata]6.6e-3573.15Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKA+I+DTDMPLK+QIQAM +ASEALDLYDV DC SIAAHIKK              +FD  HG+GWQCVVGS+FG FFTHSKGTF+YFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASSH
        IFKGAS H
Subjt:  IFKGASSH

TrEMBL top hitse value%identityAlignment
A0A2R6PUY2 Dynein light chain7.1e-3573.39Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGK L++DTDMPLK+QIQAM AAS+ALDLYDV DCKSIAAHIKK              +FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASSHS
        IFKGASS S
Subjt:  IFKGASSHS

A0A4D6N583 Dynein light chain3.2e-3573.15Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKA+I+DTDMPLK+QIQAM +ASEALDLYDV DC SIAAHIKK              +FD  HG+GWQCVVGS+FG FFTHSKGTF+YFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASSH
        IFKGAS H
Subjt:  IFKGASSH

A0A6J1GX40 Dynein light chain6.9e-3882.08Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI DTDMPLKLQIQAMKAASEALDLYDVFD KSIAAHIKK              KFDDGHG GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGAS
        IFKG S
Subjt:  IFKGAS

A0A7J0GB86 Dynein light chain4.2e-3572.97Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGK L++DTDMPLK+QIQAM AAS+ALDLYDV DCKSIAAHIKK              +FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASSHSLS
        IFKGASS S S
Subjt:  IFKGASSHSLS

W9RUV7 Dynein light chain7.1e-3572.07Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKALI+DTDMP+K+QIQAM AAS+ALD+YDVFDC+SIAAHIKK              +FD  +G GWQCVVGSNFG FFTHSKGTFIYFTLETL+FL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASSHSLS
        IFKGA+S S S
Subjt:  IFKGASSHSLS

SwissProt top hitse value%identityAlignment
P61273 Dynein light chain 1, cytoplasmic2.0e-1037.86Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK              +FD  +   W C+VG NFGS+ TH    FIYF L  +  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFK
        +FK
Subjt:  IFK

P61285 Dynein light chain 1, cytoplasmic2.0e-1037.86Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK              +FD  +   W C+VG NFGS+ TH    FIYF L  +  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFK
        +FK
Subjt:  IFK

P63167 Dynein light chain 1, cytoplasmic2.0e-1037.86Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK              +FD  +   W C+VG NFGS+ TH    FIYF L  +  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFK
        +FK
Subjt:  IFK

P63168 Dynein light chain 1, cytoplasmic2.0e-1037.86Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK              +FD  +   W C+VG NFGS+ TH    FIYF L  +  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFK
        +FK
Subjt:  IFK

P63169 Dynein light chain 1, cytoplasmic2.0e-1037.86Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK              +FD  +   W C+VG NFGS+ TH    FIYF L  +  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFK
        +FK
Subjt:  IFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 113.5e-1857.53Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCV
        MLEGKA+++D+DMP+K+Q+QAM  AS+ALDL+DVFDCKSIA HIKK              +FD+ +G+GWQCV
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.4e-3567.29Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKA+++D+DMP+K+Q+QAM  AS+ALDL+DVFDCKSIA HIKK              +FD+ +G+GWQCVVGSNFG FFTHSKGTFIYF LETL FL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGASS
        IFKGAS+
Subjt:  IFKGASS

AT3G16120.1 Dynein light chain type 1 family protein5.0e-3365.09Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKA +++TDMP+K+Q+QAMK AS++LDL+DVFD  SIAAHIKK              +FD+ +G+GWQCVVG+NFG FFTHSKGTFIYF L TLNFL
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGAS
        IFKGA+
Subjt:  IFKGAS

AT4G27360.1 Dynein light chain type 1 family protein7.1e-1944.76Show/hide
Query:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL
        MLEGKA++ DTDM   ++  A+  AS+ALD +DV +   IA  IKK              +FD  +G+GWQC+VG++FGSF TH  G FI+F++ +L  L
Subjt:  MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFL

Query:  IFKGA
        +FKG+
Subjt:  IFKGA

AT5G20110.1 Dynein light chain type 1 family protein4.4e-1341.3Show/hide
Query:  DMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFK
        DMP  +Q  A + A   LD  + F  K +A ++KK              +FD G+G  W C+VGS+FGSF THS G FIYF+++ L  L+FK
Subjt:  DMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGGGAAGGCTTTGATTGATGATACAGACATGCCTCTCAAATTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTCTATGATGTTTTTGACTG
TAAATCCATTGCTGCCCACATCAAGAAGTTTGAGATTTATTTCAATCACATGGTTAATTTTTTTGTGCAGAAATTTGATGATGGGCATGGGACGGGATGGCAATGTGTGG
TGGGTTCAAATTTTGGGAGCTTTTTCACTCATTCTAAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGGGCTTCTTCTCATTCTCTC
TCAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGGGAAGGCTTTGATTGATGATACAGACATGCCTCTCAAATTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTCTATGATGTTTTTGACTG
TAAATCCATTGCTGCCCACATCAAGAAGTTTGAGATTTATTTCAATCACATGGTTAATTTTTTTGTGCAGAAATTTGATGATGGGCATGGGACGGGATGGCAATGTGTGG
TGGGTTCAAATTTTGGGAGCTTTTTCACTCATTCTAAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGGGCTTCTTCTCATTCTCTC
TCAAACTAA
Protein sequenceShow/hide protein sequence
MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFKGASSHSL
SN